RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W GNA1P43577 159 aaPredicted RBP1.27□□□□□ -2.21
VPS16YPL045W YLR296WQ05898 108 aa1.27□□□□□ -2.21
VPS16YPL045W DYN1P36022 4092 aa1.27□□□□□ -2.21
VPS16YPL045W RPL33AP05744 107 aaKnown RBP1.26□□□□□ -2.21
VPS16YPL045W YHR213WP0CI67 198 aa1.26□□□□□ -2.21
VPS16YPL045W YHR130CP38834 111 aa1.26□□□□□ -2.21
VPS16YPL045W VAM10Q08474 114 aa1.26□□□□□ -2.21
VPS16YPL045W YPR203WQ08994 102 aa1.26□□□□□ -2.21
VPS16YPL045W YLR365WQ7LIF2 110 aa1.26□□□□□ -2.21
VPS16YPL045W YIR020CP40575 100 aa1.26□□□□□ -2.21
VPS16YPL045W RPL36BO14455 100 aaKnown RBP1.25□□□□□ -2.21
VPS16YPL045W RPL39P04650 51 aa1.25□□□□□ -2.21
VPS16YPL045W RPL36AP05745 100 aaPredicted RBP1.25□□□□□ -2.21
VPS16YPL045W AQY2P0CD90 149 aa1.25□□□□□ -2.21
VPS16YPL045W LST8P41318 303 aa1.25□□□□□ -2.21
VPS16YPL045W SEN15Q04675 128 aa1.25□□□□□ -2.21
VPS16YPL045W YHR212W-AP0CX91 67 aa1.25□□□□□ -2.21
VPS16YPL045W YBR090CP38253 122 aa1.25□□□□□ -2.21
VPS16YPL045W YGR164WP53291 111 aa1.25□□□□□ -2.21
VPS16YPL045W YIL014C-AQ02598 104 aa1.25□□□□□ -2.21
VPS16YPL045W YMR103CQ04436 120 aa1.25□□□□□ -2.21
VPS16YPL045W YPL261CQ08976 102 aa1.25□□□□□ -2.21
VPS16YPL045W YCL048W-AQ2V2Q2 79 aa1.25□□□□□ -2.21
VPS16YPL045W YMR105W-AQ8TGS8 64 aa1.25□□□□□ -2.21
VPS16YPL045W UBC5P15732 148 aa1.24□□□□□ -2.21
VPS16YPL045W YEA6P39953 335 aa1.24□□□□□ -2.21
VPS16YPL045W YER187WP40102 141 aa1.24□□□□□ -2.21
VPS16YPL045W YLR194CQ05777 254 aa1.24□□□□□ -2.21
VPS16YPL045W SCP1Q08873 200 aa1.24□□□□□ -2.21
VPS16YPL045W YPR108W-AQ3E7B3 70 aa1.24□□□□□ -2.21
VPS16YPL045W YMR122CQ03879 124 aa1.23□□□□□ -2.21
VPS16YPL045W UTP20P35194 2493 aaKnown RBP1.23□□□□□ -2.21
VPS16YPL045W ROX3P25046 220 aa1.23□□□□□ -2.21
VPS16YPL045W BUD23P25627 275 aaPredicted RBP1.23□□□□□ -2.21
VPS16YPL045W MRP17P28778 131 aa1.23□□□□□ -2.21
VPS16YPL045W HPA2Q06592 156 aa1.23□□□□□ -2.21
VPS16YPL045W PRM3Q08931 133 aa1.23□□□□□ -2.21
VPS16YPL045W YOR192C-CQ3E736 78 aa1.23□□□□□ -2.21
VPS16YPL045W OST5Q92316 86 aa1.23□□□□□ -2.21
VPS16YPL045W CCW14O13547 238 aa1.22□□□□□ -2.21
VPS16YPL045W PFY1P07274 126 aa1.22□□□□□ -2.21
VPS16YPL045W ZEO1Q08245 113 aa1.22□□□□□ -2.21
VPS16YPL045W YOL118CQ08259 102 aa1.22□□□□□ -2.21
VPS16YPL045W DAD1Q12248 94 aa1.22□□□□□ -2.21
VPS16YPL045W PCC1Q3E833 88 aa1.22□□□□□ -2.21
VPS16YPL045W HUG1Q6Q5K6 68 aa1.22□□□□□ -2.21
VPS16YPL045W YJL197C-AP0C5P0 93 aa1.22□□□□□ -2.21
VPS16YPL045W AIM4P38305 123 aaPredicted RBP1.22□□□□□ -2.21
VPS16YPL045W YHR138CP38841 114 aaPredicted RBP1.22□□□□□ -2.21
VPS16YPL045W SWM2P40342 146 aa1.21□□□□□ -2.22
VPS16YPL045W COA4Q05809 96 aa1.21□□□□□ -2.22
VPS16YPL045W GTT1P40582 234 aa1.21□□□□□ -2.22
VPS16YPL045W SNN1P48232 102 aa1.21□□□□□ -2.22
VPS16YPL045W YGL258W-AQ3E740 77 aa1.21□□□□□ -2.22
VPS16YPL045W MIC10Q96VH5 97 aa1.21□□□□□ -2.22
VPS16YPL045W COX23P38824 151 aa1.2□□□□□ -2.22
VPS16YPL045W YMR090WQ04304 227 aaKnown RBP1.2□□□□□ -2.22
VPS16YPL045W YOS1Q3E834 85 aa1.2□□□□□ -2.22
VPS16YPL045W FPR2P32472 135 aa1.2□□□□□ -2.22
VPS16YPL045W HUR1P45820 110 aa1.2□□□□□ -2.22
VPS16YPL045W YMR082CQ04276 118 aa1.2□□□□□ -2.22
VPS16YPL045W COA2Q3E823 68 aa1.2□□□□□ -2.22
VPS16YPL045W YHR213W-AQ8TGT4 77 aa1.2□□□□□ -2.22
VPS16YPL045W PAU19P0CE85 124 aa1.19□□□□□ -2.22
VPS16YPL045W UBC4P15731 148 aa1.19□□□□□ -2.22
VPS16YPL045W PAU3P25610 124 aa1.19□□□□□ -2.22
VPS16YPL045W MRPL38P35996 138 aaPredicted RBP1.19□□□□□ -2.22
VPS16YPL045W YIL163CP40448 117 aa1.19□□□□□ -2.22
VPS16YPL045W VPS55P47111 140 aa1.19□□□□□ -2.22
VPS16YPL045W HOR7Q05827 59 aa1.19□□□□□ -2.22
VPS16YPL045W YLR146W-AQ2V2P1 62 aa1.19□□□□□ -2.22
VPS16YPL045W YGR035W-AQ45U48 73 aa1.19□□□□□ -2.22
VPS16YPL045W YBL071CP38185 102 aa1.19□□□□□ -2.22
VPS16YPL045W GCV3P39726 170 aaPredicted RBP1.19□□□□□ -2.22
VPS16YPL045W QCR9P22289 66 aa1.18□□□□□ -2.22
VPS16YPL045W YBR292CP38357 123 aa1.18□□□□□ -2.22
VPS16YPL045W POR2P40478 281 aa1.18□□□□□ -2.22
VPS16YPL045W YGL194C-AQ2V2P6 80 aa1.18□□□□□ -2.22
VPS16YPL045W YLR285C-AQ3E771 56 aa1.18□□□□□ -2.22
VPS16YPL045W VMA21P41806 77 aa1.18□□□□□ -2.22
VPS16YPL045W IRC21Q04772 201 aa1.18□□□□□ -2.22
VPS16YPL045W POC4Q12245 148 aaPredicted RBP1.18□□□□□ -2.22
VPS16YPL045W YCL001W-BQ96VH2 84 aa1.18□□□□□ -2.22
VPS16YPL045W CYB5P40312 120 aa1.17□□□□□ -2.22
VPS16YPL045W MIC27P50945 234 aa1.17□□□□□ -2.22
VPS16YPL045W COX19Q3E731 98 aa1.17□□□□□ -2.22
VPS16YPL045W KSH1Q8TGJ3 72 aa1.17□□□□□ -2.22
VPS16YPL045W EMC5P40540 141 aa1.16□□□□□ -2.22
VPS16YPL045W YNL122CP53921 115 aaPredicted RBP1.16□□□□□ -2.22
VPS16YPL045W YMR007WQ03675 126 aa1.16□□□□□ -2.22
VPS16YPL045W COA6Q3E846 104 aa1.16□□□□□ -2.22
VPS16YPL045W HMRA2P0CY13 119 aa1.16□□□□□ -2.22
VPS16YPL045W MPC2P38857 129 aa1.16□□□□□ -2.22
VPS16YPL045W IMP2P46972 177 aa1.16□□□□□ -2.22
VPS16YPL045W VMA9Q3E7B6 73 aa1.16□□□□□ -2.22
VPS16YPL045W RPS22AP0C0W1 130 aaKnown RBP1.15□□□□□ -2.22
VPS16YPL045W YAR064WP39563 99 aa1.15□□□□□ -2.22
VPS16YPL045W SPI1P40092 148 aa1.15□□□□□ -2.22
VPS16YPL045W PAU4P53427 120 aa1.15□□□□□ -2.22
VPS16YPL045W CCW12Q12127 133 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 206 ms