RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	YBR200W-A	Q3E755	54 aa		3.2	□□□□□ -1.9
RIA1	YNL163C	UTP20	P35194	2493 aa	Known RBP	3.2	□□□□□ -1.9
RIA1	YNL163C	YCR085W	P25650	117 aa		3.2	□□□□□ -1.9
RIA1	YNL163C	SPI1	P40092	148 aa		3.19	□□□□□ -1.9
RIA1	YNL163C	YER039C-A	P0CD97	72 aa		3.19	□□□□□ -1.9
RIA1	YNL163C	YHR022C	P38763	256 aa		3.19	□□□□□ -1.9
RIA1	YNL163C	YJR146W	P47174	117 aa		3.19	□□□□□ -1.9
RIA1	YNL163C	RPL42A	P0CX27	106 aa	Known RBP	3.19	□□□□□ -1.9
RIA1	YNL163C	RPL42B	P0CX28	106 aa	Known RBP	3.19	□□□□□ -1.9
RIA1	YNL163C	YEL008W	P40001	126 aa		3.19	□□□□□ -1.9
RIA1	YNL163C	HAL1	Q01766	294 aa		3.19	□□□□□ -1.9
RIA1	YNL163C	KRE1	P17260	313 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	IES6	P32617	166 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	YML122C	Q03207	126 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	PPT2	Q12036	173 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	UBC11	P52492	156 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	YGR219W	P53307	113 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	YIP3	P53633	176 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	YIR021W-A	Q3E739	70 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	ECM12	O13529	151 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	RRT13	P40042	185 aa		3.18	□□□□□ -1.9
RIA1	YNL163C	RPL38	P49167	78 aa	Known RBP	3.18	□□□□□ -1.9
RIA1	YNL163C	SHU1	P38751	150 aa		3.17	□□□□□ -1.9
RIA1	YNL163C	TOS8	P53147	276 aa		3.17	□□□□□ -1.9
RIA1	YNL163C	YLR285C-A	Q3E771	56 aa		3.17	□□□□□ -1.9
RIA1	YNL163C	RPL2A	P0CX45	254 aa	Known RBP	3.17	□□□□□ -1.9
RIA1	YNL163C	RPL2B	P0CX46	254 aa	Known RBP	3.17	□□□□□ -1.9
RIA1	YNL163C	MRPL24	P36525	258 aa	Predicted RBP	3.16	□□□□□ -1.9
RIA1	YNL163C	YHL042W	P38729	150 aa		3.16	□□□□□ -1.9
RIA1	YNL163C	MIG3	P39943	394 aa		3.16	□□□□□ -1.9
RIA1	YNL163C	EMC6	Q12431	108 aa		3.16	□□□□□ -1.9
RIA1	YNL163C	YDR381C-A	Q3E6R5	114 aa		3.15	□□□□□ -1.9
RIA1	YNL163C	YCR050C	P25630	102 aa		3.15	□□□□□ -1.91
RIA1	YNL163C	YMR295C	Q03559	197 aa		3.15	□□□□□ -1.91
RIA1	YNL163C	MEC1	P38111	2368 aa		3.14	□□□□□ -1.91
RIA1	YNL163C	PEX17	P40155	199 aa		3.14	□□□□□ -1.91
RIA1	YNL163C	MPC3	P53311	146 aa		3.14	□□□□□ -1.91
RIA1	YNL163C	YLR156W	P0CE96	114 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	YLR159W	P0CE97	114 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	YLR161W	P0CE98	114 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	MPC2	P38857	129 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	SVP26	P38869	228 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	YBR219C	P38317	127 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	ARC15	P40518	154 aa	RIP-Chip data	3.13	□□□□□ -1.91	not detected
RIA1	YNL163C	YDL186W	P48568	277 aa		3.13	□□□□□ -1.91
RIA1	YNL163C	YSY6	P38374	65 aa		3.12	□□□□□ -1.91
RIA1	YNL163C	YCR041W	P37265	110 aa		3.12	□□□□□ -1.91
RIA1	YNL163C	YER187W	P40102	141 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	ALG13	P53178	202 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	YPL038W-A	Q3E7B4	63 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	TAR1	Q8TGM6	124 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	YJR107C-A	P0CT86	78 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	RPS11A	P0CX47	156 aa	Known RBP	3.11	□□□□□ -1.91
RIA1	YNL163C	RPS11B	P0CX48	156 aa	Known RBP	3.11	□□□□□ -1.91
RIA1	YNL163C	ERG28	P40030	148 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	RGM1	Q00453	211 aa		3.11	□□□□□ -1.91
RIA1	YNL163C	YMR244W	Q04018	355 aa		3.1	□□□□□ -1.91
RIA1	YNL163C	YLL006W-A	Q3E814	58 aa		3.1	□□□□□ -1.91
RIA1	YNL163C	YGR035W-A	Q45U48	73 aa		3.1	□□□□□ -1.91
RIA1	YNL163C	YFL019C	P43576	117 aa		3.1	□□□□□ -1.91
RIA1	YNL163C	UBC5	P15732	148 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	YCR001W	P25347	104 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	IRC21	Q04772	201 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	YOR268C	Q08734	132 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	BET1	P22804	142 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	COX12	Q01519	83 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	RRT15	Q3E811	62 aa		3.09	□□□□□ -1.91
RIA1	YNL163C	YMR320W	Q04897	101 aa		3.09	□□□□□ -1.92
RIA1	YNL163C	MSA2	P36157	363 aa		3.08	□□□□□ -1.92
RIA1	YNL163C	SMD1	Q02260	146 aa	Predicted RBP	3.08	□□□□□ -1.92
RIA1	YNL163C	CCW12	Q12127	133 aa		3.08	□□□□□ -1.92
RIA1	YNL163C	PMP3	P87284	55 aa		3.08	□□□□□ -1.92
RIA1	YNL163C	VAM10	Q08474	114 aa		3.08	□□□□□ -1.92
RIA1	YNL163C	QCR8	P08525	94 aa		3.08	□□□□□ -1.92
RIA1	YNL163C	YNL146C-A	Q3E7Z1	64 aa		3.07	□□□□□ -1.92
RIA1	YNL163C	TOM6	P33448	61 aa		3.07	□□□□□ -1.92
RIA1	YNL163C	ERI1	P62651	68 aa	Known RBP	3.07	□□□□□ -1.92
RIA1	YNL163C	MRPS8	Q03799	155 aa		3.07	□□□□□ -1.92
RIA1	YNL163C	ATP20	Q12233	115 aa		3.07	□□□□□ -1.92
RIA1	YNL163C	YBR144C	P34215	104 aa		3.06	□□□□□ -1.92
RIA1	YNL163C	AIM4	P38305	123 aa	Predicted RBP	3.06	□□□□□ -1.92
RIA1	YNL163C	COX14	P39103	70 aa		3.06	□□□□□ -1.92
RIA1	YNL163C	RSM18	P40033	138 aa		3.06	□□□□□ -1.92
RIA1	YNL163C	HOR7	Q05827	59 aa		3.06	□□□□□ -1.92
RIA1	YNL163C	SRL1	Q08673	210 aa		3.06	□□□□□ -1.92
RIA1	YNL163C	NOP10	Q6Q547	58 aa	Predicted RBP	3.05	□□□□□ -1.92
RIA1	YNL163C	SBH1	P52870	82 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	CRC1	Q12289	327 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	YIL102C	P40488	101 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	SPG4	Q04438	115 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	YDR246W-A	Q3E763	66 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	YFR009W-A	P0C5M9	85 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	RPR2	P40571	144 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	ATP18	P81450	59 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	YER175W-A	Q8TGU4	54 aa		3.04	□□□□□ -1.92
RIA1	YNL163C	TDA2	P40045	126 aa		3.03	□□□□□ -1.92
RIA1	YNL163C	YPS5	P53057	165 aa		3.03	□□□□□ -1.92
RIA1	YNL163C	YOL014W	Q08110	124 aa		3.03	□□□□□ -1.92
RIA1	YNL163C	KSH1	Q8TGJ3	72 aa		3.03	□□□□□ -1.92
RIA1	YNL163C	YAR029W	P39549	74 aa		3.03	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms