RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W SCP1Q08873 200 aa0.56□□□□□ -2.32
MVP1YMR004W YNR034W-AQ3E841 98 aa0.56□□□□□ -2.32
MVP1YMR004W ESC1Q03661 1658 aaKnown RBP0.55□□□□□ -2.32
MVP1YMR004W MRPL38P35996 138 aaPredicted RBP0.55□□□□□ -2.32
MVP1YMR004W YKL065W-AQ2V2P2 73 aa0.55□□□□□ -2.32
MVP1YMR004W RPS11AP0CX47 156 aaKnown RBP0.54□□□□□ -2.32
MVP1YMR004W RPS11BP0CX48 156 aaKnown RBP0.54□□□□□ -2.32
MVP1YMR004W AUA1P32450 94 aa0.54□□□□□ -2.32
MVP1YMR004W TOM6P33448 61 aa0.54□□□□□ -2.32
MVP1YMR004W YOR343CQ12484 108 aa0.54□□□□□ -2.32
MVP1YMR004W YGL194C-AQ2V2P6 80 aa0.54□□□□□ -2.32
MVP1YMR004W YNL042W-BQ3E7Z2 85 aa0.54□□□□□ -2.32
MVP1YMR004W MMS22Q06164 1454 aa0.54□□□□□ -2.32
MVP1YMR004W YRF1-1P0CX20 1796 aa0.54□□□□□ -2.32
MVP1YMR004W YRF1-5P0CX21 1796 aa0.54□□□□□ -2.32
MVP1YMR004W YRF1-8P0CX22 1796 aa0.54□□□□□ -2.32
MVP1YMR004W FPR2P32472 135 aa0.54□□□□□ -2.32
MVP1YMR004W RPA12P32529 125 aaKnown RBP0.54□□□□□ -2.32
MVP1YMR004W YOL097W-AQ3E7Y9 61 aa0.54□□□□□ -2.32
MVP1YMR004W RIM15P43565 1770 aa0.53□□□□□ -2.32
MVP1YMR004W RPS29BP41058 56 aaKnown RBP0.53□□□□□ -2.33
MVP1YMR004W YOR105WQ08504 108 aa0.53□□□□□ -2.33
MVP1YMR004W POL1P13382 1468 aa0.52□□□□□ -2.33
MVP1YMR004W YNL198CP40166 100 aa0.52□□□□□ -2.33
MVP1YMR004W ATP18P81450 59 aa0.52□□□□□ -2.33
MVP1YMR004W Q0032Q9ZZX7 96 aa0.52□□□□□ -2.33
MVP1YMR004W YRF1-2P40105 1681 aa0.52□□□□□ -2.33
MVP1YMR004W YAL065CO13511 128 aa0.51□□□□□ -2.33
MVP1YMR004W YCR085WP25650 117 aa0.51□□□□□ -2.33
MVP1YMR004W YBR201C-AQ2V2Q3 67 aa0.51□□□□□ -2.33
MVP1YMR004W YMR175W-AQ3E766 64 aa0.51□□□□□ -2.33
MVP1YMR004W YOL164W-AQ3E7A5 60 aa0.51□□□□□ -2.33
MVP1YMR004W TY1B-BLQ12490 1755 aa0.5□□□□□ -2.33
MVP1YMR004W DNF3Q12674 1656 aa0.5□□□□□ -2.33
MVP1YMR004W YOR314WQ12506 109 aa0.5□□□□□ -2.33
MVP1YMR004W SDH6Q3E785 79 aa0.5□□□□□ -2.33
MVP1YMR004W FAS2P19097 1887 aaKnown RBP0.5□□□□□ -2.33
MVP1YMR004W YSP2Q06681 1438 aa0.49□□□□□ -2.33
MVP1YMR004W YJR107C-AP0CT86 78 aa0.49□□□□□ -2.33
MVP1YMR004W YBR032WP38223 100 aa0.49□□□□□ -2.33
MVP1YMR004W CWP2P43497 92 aa0.49□□□□□ -2.33
MVP1YMR004W EDC1P53080 175 aaPredicted RBP0.49□□□□□ -2.33
MVP1YMR004W SGF11Q03067 99 aa0.49□□□□□ -2.33
MVP1YMR004W PAU23Q07987 124 aa0.49□□□□□ -2.33
MVP1YMR004W PAU17Q12370 124 aa0.49□□□□□ -2.33
MVP1YMR004W YMR122W-AQ3E842 84 aa0.49□□□□□ -2.33
MVP1YMR004W TY1B-BRQ12193 1756 aa0.49□□□□□ -2.33
MVP1YMR004W XRN1P22147 1528 aaKnown RBP0.49□□□□□ -2.33
MVP1YMR004W MOT1P32333 1867 aa0.49□□□□□ -2.33
MVP1YMR004W SNF2P22082 1703 aa0.49□□□□□ -2.33
MVP1YMR004W RPC10P40422 70 aa0.48□□□□□ -2.33
MVP1YMR004W YDR381C-AQ3E6R5 114 aa0.48□□□□□ -2.33
MVP1YMR004W YNL190WP53872 204 aa0.48□□□□□ -2.33
MVP1YMR004W NOP10Q6Q547 58 aaPredicted RBP0.48□□□□□ -2.33
MVP1YMR004W MLP1Q02455 1875 aaKnown RBP0.47□□□□□ -2.33
MVP1YMR004W APC1P53886 1748 aa0.47□□□□□ -2.33
MVP1YMR004W QCR9P22289 66 aa0.47□□□□□ -2.33
MVP1YMR004W SWM2P40342 146 aa0.47□□□□□ -2.33
MVP1YMR004W POC4Q12245 148 aaPredicted RBP0.47□□□□□ -2.33
MVP1YMR004W YPR108W-AQ3E7B3 70 aa0.47□□□□□ -2.33
MVP1YMR004W YIL134C-AQ45U18 67 aa0.47□□□□□ -2.33
MVP1YMR004W TY1B-PR2P0C2J0 1756 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-DR6P0C2I3 1755 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-LR2P0C2I5 1755 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-PR3P0C2J1 1755 aaKnown RBP0.46□□□□□ -2.34
MVP1YMR004W TY1B-JR2P47100 1755 aaKnown RBP0.46□□□□□ -2.34
MVP1YMR004W TY1B-MR1Q04214 1755 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-MR2Q04670 1755 aaKnown RBP0.46□□□□□ -2.34
MVP1YMR004W TY1B-NL1Q12112 1755 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-GR1Q12141 1755 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-GR3Q12316 1755 aa0.46□□□□□ -2.34
MVP1YMR004W TY1B-PLQ12414 1755 aaKnown RBP0.46□□□□□ -2.34
MVP1YMR004W TY1B-ORQ92393 1755 aa0.46□□□□□ -2.34
MVP1YMR004W YFR009W-AP0C5M9 85 aa0.45□□□□□ -2.34
MVP1YMR004W YGR025WP53216 100 aa0.45□□□□□ -2.34
MVP1YMR004W YPR145C-AQ2V2P0 78 aa0.45□□□□□ -2.34
MVP1YMR004W YHR213W-AQ8TGT4 77 aa0.45□□□□□ -2.34
MVP1YMR004W TY1B-LR3P0C2I6 1755 aaKnown RBP0.45□□□□□ -2.34
MVP1YMR004W ECM29P38737 1868 aa0.45□□□□□ -2.34
MVP1YMR004W NUP159P40477 1460 aa0.45□□□□□ -2.34
MVP1YMR004W TAO3P40468 2376 aa0.44□□□□□ -2.34
MVP1YMR004W PAU7P39545 55 aa0.44□□□□□ -2.34
MVP1YMR004W ATP17Q06405 101 aa0.44□□□□□ -2.34
MVP1YMR004W PAI3P01094 68 aa0.43□□□□□ -2.34
MVP1YMR004W LSM2P38203 95 aaKnown RBP0.43□□□□□ -2.34
MVP1YMR004W HUB1Q6Q546 73 aa0.43□□□□□ -2.34
MVP1YMR004W SIN3P22579 1536 aa0.43□□□□□ -2.34
MVP1YMR004W KOG1P38873 1557 aa0.43□□□□□ -2.34
MVP1YMR004W IML1P47170 1584 aa0.43□□□□□ -2.34
MVP1YMR004W HKR1P41809 1802 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-DR5P0C2I2 1755 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-PR1P0C2I9 1755 aaKnown RBP0.43□□□□□ -2.34
MVP1YMR004W YBR016WP38216 128 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-JR1P47098 1755 aa0.43□□□□□ -2.34
MVP1YMR004W OLI1P61829 76 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-ML2Q03434 1755 aaKnown RBP0.43□□□□□ -2.34
MVP1YMR004W TY1B-ER1Q03612 1755 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-ER2Q03619 1755 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-DR1Q03855 1755 aa0.43□□□□□ -2.34
MVP1YMR004W TY1B-ML1Q04711 1755 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms