RNA–Protein interactions for RNA: YLR140W

YLR140W, Transcript of Dubious open reading frame unlikely to encode a functional protein, yeast

Gene YLR140W, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR140W	YLR140W	PAU16	P35994	123 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	YBR292C	P38357	123 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	COX23	P38824	151 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	DSE2	P38844	325 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	PAU15	P40585	124 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	SNA2	P56508	79 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	SED1	Q01589	338 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	MIX17	Q03667	156 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	IRC21	Q04772	201 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	YIL102C-A	Q2V2P5	75 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	RRT15	Q3E811	62 aa		0.95	□□□□□ -2.26
YLR140W	YLR140W	MLP2	P40457	1679 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	PMD1	P32634	1753 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	RPL33A	P05744	107 aa	Known RBP	0.94	□□□□□ -2.26
YLR140W	YLR140W	PDX3	P38075	228 aa	Known RBP	0.94	□□□□□ -2.26
YLR140W	YLR140W	AIM19	P40502	157 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	LST8	P41318	303 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	MRX7	P53869	86 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	YLR194C	Q05777	254 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	LSM6	Q06406	86 aa	Known RBP	0.94	□□□□□ -2.26
YLR140W	YLR140W	FIT2	Q08906	153 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	YKL023C-A	Q2V2P3	75 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	YGL041C-B	Q3E750	60 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	YCR095W-A	Q3E787	52 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	YNR034W-A	Q3E841	98 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	YIL134C-A	Q45U18	67 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	PEP1	P32319	1579 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	MOT1	P32333	1867 aa		0.94	□□□□□ -2.26
YLR140W	YLR140W	THO2	P53552	1597 aa	Known RBP	0.93	□□□□□ -2.26
YLR140W	YLR140W	CCW14	O13547	238 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	YGL014C-A	P0C5N1	53 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	SPI1	P40092	148 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	YNL198C	P40166	100 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	PAU5	P43575	122 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	YJL009W	P47078	108 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	VPS55	P47111	140 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	BSC4	P53841	131 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	CMC4	Q3E7A9	73 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	YOR093C	Q12275	1648 aa		0.93	□□□□□ -2.26
YLR140W	YLR140W	APC1	P53886	1748 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	NUP188	P52593	1655 aa	Known RBP	0.92	□□□□□ -2.26
YLR140W	YLR140W	YER188C-A	P0C0V2	99 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	HMRA2	P0CY13	119 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	MRPL31	P14063	131 aa	Predicted RBP	0.92	□□□□□ -2.26
YLR140W	YLR140W	QCR9	P22289	66 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	MRPL38	P35996	138 aa	Predicted RBP	0.92	□□□□□ -2.26
YLR140W	YLR140W	YBR219C	P38317	127 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	YMR122C	Q03879	124 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	NUP170	P38181	1502 aa		0.92	□□□□□ -2.26
YLR140W	YLR140W	YSF3	P0C074	85 aa	Predicted RBP	0.91	□□□□□ -2.26
YLR140W	YLR140W	RPS22A	P0C0W1	130 aa	Known RBP	0.91	□□□□□ -2.26
YLR140W	YLR140W	YSY6	P38374	65 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	MPC2	P38857	129 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	YIL163C	P40448	117 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	YLR162W	Q06235	118 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	YPR145C-A	Q2V2P0	78 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	COX19	Q3E731	98 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	YLR285C-A	Q3E771	56 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	YDR182W-A	Q3E796	67 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	YGR121W-A	Q3E816	71 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	TY4B-J	P47024	1803 aa		0.91	□□□□□ -2.26
YLR140W	YLR140W	SLH1	P53327	1967 aa	Known RBP	0.9	□□□□□ -2.26
YLR140W	YLR140W	TY4B-H	P0C2J7	1802 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	YHR173C	P38864	112 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	SPC1	P46965	94 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	PAU4	P53427	120 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	YOR072W	Q08486	104 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	YGR240C-A	Q3E786	66 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.9	□□□□□ -2.27
YLR140W	YLR140W	YOL097W-A	Q3E7Y9	61 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	VMR1	P38735	1592 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	RKR1	Q04781	1562 aa		0.9	□□□□□ -2.27
YLR140W	YLR140W	CHC1	P22137	1653 aa	Known RBP	0.9	□□□□□ -2.27
YLR140W	YLR140W	LAA1	P39526	2014 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	YRF1-1	P0CX20	1796 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	YRF1-5	P0CX21	1796 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	YRF1-8	P0CX22	1796 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	URB1	P34241	1764 aa	Known RBP	0.89	□□□□□ -2.27
YLR140W	YLR140W	DNF3	Q12674	1656 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	ARO1	P08566	1588 aa	Known RBP	0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU1	P0CE88	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU14	P0CE89	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU6	P0CE90	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU18	P0CE91	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU8	P0CE92	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU11	P0CE93	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	RPS11A	P0CX47	156 aa	Known RBP	0.89	□□□□□ -2.27
YLR140W	YLR140W	RPS11B	P0CX48	156 aa	Known RBP	0.89	□□□□□ -2.27
YLR140W	YLR140W	FPR1	P20081	114 aa	Known RBP	0.89	□□□□□ -2.27
YLR140W	YLR140W	YBL071C	P38185	102 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU13	P38725	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU7	P39545	55 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU10	Q03050	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	YHR086W-A	Q3E746	53 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	PAU9	Q3E770	120 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	YNL146C-A	Q3E7Z1	64 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	HUB1	Q6Q546	73 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	TAR1	Q8TGM6	124 aa		0.89	□□□□□ -2.27
YLR140W	YLR140W	FPR2	P32472	135 aa		0.88	□□□□□ -2.27
YLR140W	YLR140W	TIM12	P32830	109 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms