RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C DFM1Q12743 341 aaKnown RBP4.42□□□□□ -1.7
SSK1YLR006C YAR023CD6VPM8 179 aa4.4□□□□□ -1.7
SSK1YLR006C YCR085WP25650 117 aa4.4□□□□□ -1.7
SSK1YLR006C POR2P40478 281 aa4.4□□□□□ -1.7
SSK1YLR006C YGR025WP53216 100 aa4.4□□□□□ -1.7
SSK1YLR006C MGR2Q02889 113 aa4.4□□□□□ -1.7
SSK1YLR006C ATP20Q12233 115 aa4.4□□□□□ -1.7
SSK1YLR006C CAX4P53223 239 aa4.4□□□□□ -1.71
SSK1YLR006C YPL261CQ08976 102 aa4.4□□□□□ -1.71
SSK1YLR006C TDA2P40045 126 aa4.39□□□□□ -1.71
SSK1YLR006C PFY1P07274 126 aa4.39□□□□□ -1.71
SSK1YLR006C RSM19P53733 91 aaPredicted RBP4.39□□□□□ -1.71
SSK1YLR006C YOR020W-AQ3E824 90 aa4.39□□□□□ -1.71
SSK1YLR006C TMC1Q08422 150 aaPredicted RBP4.38□□□□□ -1.71
SSK1YLR006C BPH1P25356 2167 aa4.38□□□□□ -1.71
SSK1YLR006C YOL085CQ99345 113 aa4.37□□□□□ -1.71
SSK1YLR006C MID2P36027 376 aa4.37□□□□□ -1.71
SSK1YLR006C YHL018WP38744 120 aaPredicted RBP4.37□□□□□ -1.71
SSK1YLR006C YEL067CP39978 195 aa4.37□□□□□ -1.71
SSK1YLR006C YNL217WP40152 326 aa4.37□□□□□ -1.71
SSK1YLR006C YLR296WQ05898 108 aa4.37□□□□□ -1.71
SSK1YLR006C COA3Q3E7B2 85 aa4.37□□□□□ -1.71
SSK1YLR006C GCN1P33892 2672 aaKnown RBP4.36□□□□□ -1.71
SSK1YLR006C YEL045CP32616 141 aa4.36□□□□□ -1.71
SSK1YLR006C YKL023C-AQ2V2P3 75 aa4.36□□□□□ -1.71
SSK1YLR006C YJR085CP47131 105 aaKnown RBP4.36□□□□□ -1.71
SSK1YLR006C TOS6P48560 102 aa4.36□□□□□ -1.71
SSK1YLR006C ENV10Q99382 181 aa4.35□□□□□ -1.71
SSK1YLR006C HHF1P02309 103 aaKnown RBP4.34□□□□□ -1.71
SSK1YLR006C YDL022C-AP0C5L6 82 aa4.34□□□□□ -1.71
SSK1YLR006C YNR077CP53758 84 aa4.34□□□□□ -1.71
SSK1YLR006C HAL1Q01766 294 aa4.34□□□□□ -1.71
SSK1YLR006C NHP2P32495 156 aaPredicted RBP4.34□□□□□ -1.71
SSK1YLR006C YMR244WQ04018 355 aa4.34□□□□□ -1.71
SSK1YLR006C PRM7Q12459 698 aa4.34□□□□□ -1.71
SSK1YLR006C YOR011W-AQ3E807 68 aa4.34□□□□□ -1.71
SSK1YLR006C RPL42AP0CX27 106 aaKnown RBP4.33□□□□□ -1.72
SSK1YLR006C RPL42BP0CX28 106 aaKnown RBP4.33□□□□□ -1.72
SSK1YLR006C YHR022CP38763 256 aa4.33□□□□□ -1.72
SSK1YLR006C SPI1P40092 148 aa4.33□□□□□ -1.72
SSK1YLR006C YDR274CP87283 123 aa4.33□□□□□ -1.72
SSK1YLR006C YML122CQ03207 126 aa4.33□□□□□ -1.72
SSK1YLR006C SRL1Q08673 210 aa4.33□□□□□ -1.72
SSK1YLR006C YOR008C-AQ3E7B9 74 aa4.33□□□□□ -1.72
SSK1YLR006C RPA12P32529 125 aaKnown RBP4.33□□□□□ -1.72
SSK1YLR006C YIR020CP40575 100 aa4.33□□□□□ -1.72
SSK1YLR006C SPG1P50088 95 aa4.33□□□□□ -1.72
SSK1YLR006C ATX1P38636 73 aa4.32□□□□□ -1.72
SSK1YLR006C MPC3P53311 146 aa4.32□□□□□ -1.72
SSK1YLR006C SVP26P38869 228 aa4.31□□□□□ -1.72
SSK1YLR006C DCV1P43595 202 aa4.31□□□□□ -1.72
SSK1YLR006C YDR119W-AQ2V2P9 66 aa4.31□□□□□ -1.72
SSK1YLR006C YMR175W-AQ3E766 64 aa4.31□□□□□ -1.72
SSK1YLR006C YPR053CQ6Q5F3 151 aa4.31□□□□□ -1.72
SSK1YLR006C RPB9P27999 122 aa4.31□□□□□ -1.72
SSK1YLR006C NRG2P38082 220 aa4.31□□□□□ -1.72
SSK1YLR006C YLR194CQ05777 254 aa4.31□□□□□ -1.72
SSK1YLR006C LSM6Q06406 86 aaKnown RBP4.31□□□□□ -1.72
SSK1YLR006C YPR013CQ12145 317 aa4.31□□□□□ -1.72
SSK1YLR006C YBR200W-AQ3E755 54 aa4.31□□□□□ -1.72
SSK1YLR006C KRE1P17260 313 aa4.3□□□□□ -1.72
SSK1YLR006C YOR381W-AQ3E804 55 aa4.3□□□□□ -1.72
SSK1YLR006C FYV5P25585 152 aa4.3□□□□□ -1.72
SSK1YLR006C YOR268CQ08734 132 aa4.3□□□□□ -1.72
SSK1YLR006C EMC6Q12431 108 aa4.3□□□□□ -1.72
SSK1YLR006C HPA2Q06592 156 aa4.29□□□□□ -1.72
SSK1YLR006C YLR122CQ12312 125 aa4.29□□□□□ -1.72
SSK1YLR006C YBR056W-AI2HB52 66 aa4.28□□□□□ -1.72
SSK1YLR006C YBR209WP38311 105 aa4.28□□□□□ -1.72
SSK1YLR006C LIP1Q03579 150 aa4.28□□□□□ -1.72
SSK1YLR006C CCW12Q12127 133 aa4.28□□□□□ -1.72
SSK1YLR006C QCR10P37299 77 aa4.28□□□□□ -1.72
SSK1YLR006C YNL190WP53872 204 aa4.28□□□□□ -1.72
SSK1YLR006C YCL021W-AQ96VH3 125 aa4.28□□□□□ -1.72
SSK1YLR006C VPS55P47111 140 aa4.27□□□□□ -1.73
SSK1YLR006C YJR146WP47174 117 aa4.27□□□□□ -1.73
SSK1YLR006C HOR7Q05827 59 aa4.27□□□□□ -1.73
SSK1YLR006C ECM19Q06011 112 aa4.27□□□□□ -1.73
SSK1YLR006C YDL241WQ07738 123 aa4.27□□□□□ -1.73
SSK1YLR006C YNL146C-AQ3E7Z1 64 aa4.27□□□□□ -1.73
SSK1YLR006C TEL1P38110 2787 aa4.26□□□□□ -1.73
SSK1YLR006C SOM1Q05676 74 aa4.25□□□□□ -1.73
SSK1YLR006C URA2P07259 2214 aaKnown RBP4.25□□□□□ -1.73
SSK1YLR006C DSE2P38844 325 aa4.25□□□□□ -1.73
SSK1YLR006C MIG3P39943 394 aa4.25□□□□□ -1.73
SSK1YLR006C YER187WP40102 141 aa4.25□□□□□ -1.73
SSK1YLR006C ARC15P40518 154 aaRIP-Chip data4.25□□□□□ -1.73not detected
SSK1YLR006C HUR1P45820 110 aa4.25□□□□□ -1.73
SSK1YLR006C MRPS8Q03799 155 aa4.25□□□□□ -1.73
SSK1YLR006C CCW14O13547 238 aa4.24□□□□□ -1.73
SSK1YLR006C ICY1Q04329 127 aa4.24□□□□□ -1.73
SSK1YLR006C YER078W-AQ3E7A2 54 aa4.24□□□□□ -1.73
SSK1YLR006C RPR2P40571 144 aa4.23□□□□□ -1.73
SSK1YLR006C MRPS12P53732 153 aa4.23□□□□□ -1.73
SSK1YLR006C SHU1P38751 150 aa4.22□□□□□ -1.73
SSK1YLR006C TOM6P33448 61 aa4.22□□□□□ -1.73
SSK1YLR006C YEL008WP40001 126 aa4.22□□□□□ -1.73
SSK1YLR006C RRT13P40042 185 aa4.22□□□□□ -1.73
SSK1YLR006C Q0297Q9ZZV8 51 aa4.22□□□□□ -1.73
SSK1YLR006C YMR295CQ03559 197 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 120.9 ms