RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C PAU11P0CE93 120 aa-0.42□□□□□ -2.48
CMS1YLR003C PAU13P38725 120 aa-0.42□□□□□ -2.48
CMS1YLR003C PAU10Q03050 120 aa-0.42□□□□□ -2.48
CMS1YLR003C PAU9Q3E770 120 aa-0.42□□□□□ -2.48
CMS1YLR003C YJR107C-AP0CT86 78 aa-0.43□□□□□ -2.48
CMS1YLR003C KSH1Q8TGJ3 72 aa-0.43□□□□□ -2.48
CMS1YLR003C YOR289WQ12012 251 aaPredicted RBP-0.44□□□□□ -2.48
CMS1YLR003C YNL042W-BQ3E7Z2 85 aa-0.44□□□□□ -2.48
CMS1YLR003C RPA190P10964 1664 aaKnown RBP-0.44□□□□□ -2.48
CMS1YLR003C GEA2P39993 1459 aaKnown RBP-0.45□□□□□ -2.48
CMS1YLR003C EMC5P40540 141 aa-0.45□□□□□ -2.48
CMS1YLR003C PAU4P53427 120 aa-0.46□□□□□ -2.48
CMS1YLR003C NHP10Q03435 203 aa-0.46□□□□□ -2.48
CMS1YLR003C Q0032Q9ZZX7 96 aa-0.46□□□□□ -2.48
CMS1YLR003C YIL134C-AQ45U18 67 aa-0.47□□□□□ -2.48
CMS1YLR003C YER137CP40083 148 aaKnown RBP-0.48□□□□□ -2.49
CMS1YLR003C SPC1P46965 94 aa-0.48□□□□□ -2.49
CMS1YLR003C HMRA1P0CY11 126 aa-0.5□□□□□ -2.49
CMS1YLR003C YGR025WP53216 100 aa-0.5□□□□□ -2.49
CMS1YLR003C PMD1P32634 1753 aa-0.5□□□□□ -2.49
CMS1YLR003C TY1B-DR5P0C2I2 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.52□□□□□ -2.49
CMS1YLR003C TY1B-JR1P47098 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-ML2Q03434 1755 aaKnown RBP-0.52□□□□□ -2.49
CMS1YLR003C TY1B-ER1Q03612 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-ER2Q03619 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-DR1Q03855 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-ML1Q04711 1755 aaKnown RBP-0.52□□□□□ -2.49
CMS1YLR003C TY1B-LR1Q12088 1755 aaKnown RBP-0.52□□□□□ -2.49
CMS1YLR003C TY1B-GR2Q12269 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-OLQ12273 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C TY1B-DR3Q99231 1755 aa-0.52□□□□□ -2.49
CMS1YLR003C YBR201C-AQ2V2Q3 67 aa-0.52□□□□□ -2.49
CMS1YLR003C TOM6P33448 61 aa-0.53□□□□□ -2.49
CMS1YLR003C RGI1P40043 161 aaPredicted RBP-0.53□□□□□ -2.49
CMS1YLR003C RRT15Q3E811 62 aa-0.53□□□□□ -2.49
CMS1YLR003C YCR108CQ3E819 63 aa-0.53□□□□□ -2.49
CMS1YLR003C MOT1P32333 1867 aa-0.54□□□□□ -2.5
CMS1YLR003C BSC4P53841 131 aa-0.55□□□□□ -2.5
CMS1YLR003C SEN1Q00416 2231 aaKnown RBP-0.55□□□□□ -2.5
CMS1YLR003C POL1P13382 1468 aa-0.55□□□□□ -2.5
CMS1YLR003C STT4P37297 1900 aa-0.56□□□□□ -2.5
CMS1YLR003C ECM29P38737 1868 aa-0.56□□□□□ -2.5
CMS1YLR003C YBR056W-AI2HB52 66 aa-0.56□□□□□ -2.5
CMS1YLR003C SNU13P39990 126 aaKnown RBP-0.56□□□□□ -2.5
CMS1YLR003C YDR381C-AQ3E6R5 114 aa-0.56□□□□□ -2.5
CMS1YLR003C YMR122W-AQ3E842 84 aa-0.56□□□□□ -2.5
CMS1YLR003C BPH1P25356 2167 aa-0.56□□□□□ -2.5
CMS1YLR003C UTP20P35194 2493 aaKnown RBP-0.57□□□□□ -2.5
CMS1YLR003C YDR029WQ12111 104 aa-0.57□□□□□ -2.5
CMS1YLR003C XRN1P22147 1528 aaKnown RBP-0.6□□□□□ -2.51
CMS1YLR003C YAL065CO13511 128 aa-0.61□□□□□ -2.51
CMS1YLR003C EDC1P53080 175 aaPredicted RBP-0.61□□□□□ -2.51
CMS1YLR003C ATP18P81450 59 aa-0.61□□□□□ -2.51
CMS1YLR003C SDH6Q3E785 79 aa-0.61□□□□□ -2.51
CMS1YLR003C GDB1Q06625 1536 aa-0.61□□□□□ -2.51
CMS1YLR003C MSL1P40567 111 aaPredicted RBP-0.62□□□□□ -2.51
CMS1YLR003C PDR10P51533 1564 aa-0.62□□□□□ -2.51
CMS1YLR003C YHR214C-DP0CX93 97 aa-0.63□□□□□ -2.51
CMS1YLR003C YDR042CQ03205 200 aa-0.63□□□□□ -2.51
CMS1YLR003C YDR246W-AQ3E763 66 aa-0.64□□□□□ -2.51
CMS1YLR003C SWR1Q05471 1514 aa-0.65□□□□□ -2.51
CMS1YLR003C MMS1Q06211 1407 aa-0.65□□□□□ -2.51
CMS1YLR003C YBL044WP38194 122 aa-0.66□□□□□ -2.52
CMS1YLR003C SUS1Q6WNK7 96 aa-0.66□□□□□ -2.52
CMS1YLR003C UTP10P42945 1769 aaKnown RBP-0.67□□□□□ -2.52
CMS1YLR003C FYV7Q12247 151 aa-0.67□□□□□ -2.52
CMS1YLR003C ECM12O13529 151 aa-0.69□□□□□ -2.52
CMS1YLR003C YCR085WP25650 117 aa-0.69□□□□□ -2.52
CMS1YLR003C NHP2P32495 156 aaPredicted RBP-0.69□□□□□ -2.52
CMS1YLR003C MHF2Q3E829 80 aa-0.69□□□□□ -2.52
CMS1YLR003C YBR032WP38223 100 aa-0.7□□□□□ -2.52
CMS1YLR003C RPS29AP41057 56 aaKnown RBP-0.7□□□□□ -2.52
CMS1YLR003C YKL068W-AQ3E826 78 aa-0.7□□□□□ -2.52
CMS1YLR003C FPR2P32472 135 aa-0.72□□□□□ -2.52
CMS1YLR003C YPR108W-AQ3E7B3 70 aa-0.72□□□□□ -2.52
CMS1YLR003C YOL097W-AQ3E7Y9 61 aa-0.72□□□□□ -2.52
CMS1YLR003C TY2B-LR1P0C2J3 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-FP0CX63 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-GR2P0CX64 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-CP25384 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-DR2Q03494 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-DR3Q07791 1770 aaKnown RBP-0.73□□□□□ -2.53
CMS1YLR003C TY2B-OR1Q12113 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-DR1Q12472 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-BQ12491 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C TY2B-OR2Q12501 1770 aa-0.73□□□□□ -2.53
CMS1YLR003C PAU23Q07987 124 aa-0.74□□□□□ -2.53
CMS1YLR003C SCP1Q08873 200 aa-0.74□□□□□ -2.53
CMS1YLR003C PAU17Q12370 124 aa-0.74□□□□□ -2.53
CMS1YLR003C YMR082CQ04276 118 aa-0.77□□□□□ -2.53
CMS1YLR003C NOP10Q6Q547 58 aaPredicted RBP-0.77□□□□□ -2.53
CMS1YLR003C YMR175W-AQ3E766 64 aa-0.78□□□□□ -2.53
CMS1YLR003C ZEO1Q08245 113 aa-0.79□□□□□ -2.54
CMS1YLR003C YOR343CQ12484 108 aa-0.8□□□□□ -2.54
CMS1YLR003C APC1P53886 1748 aa-0.81□□□□□ -2.54
CMS1YLR003C YIL156W-BQ2V2P4 73 aa-0.82□□□□□ -2.54
CMS1YLR003C YCR075W-AQ3E830 75 aa-0.85□□□□□ -2.55
CMS1YLR003C YCL001W-BQ96VH2 84 aa-0.85□□□□□ -2.55
CMS1YLR003C YPL225WQ08971 146 aaKnown RBP-0.88□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms