RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C KSH1Q8TGJ3 72 aa-0.09□□□□□ -2.42
RFA3YJL173C Q0032Q9ZZX7 96 aa-0.09□□□□□ -2.42
RFA3YJL173C HMRA1P0CY11 126 aa-0.1□□□□□ -2.43
RFA3YJL173C NHP10Q03435 203 aa-0.1□□□□□ -2.43
RFA3YJL173C TY1B-BRQ12193 1756 aa-0.11□□□□□ -2.43
RFA3YJL173C TOM6P33448 61 aa-0.12□□□□□ -2.43
RFA3YJL173C BSC4P53841 131 aa-0.14□□□□□ -2.43
RFA3YJL173C DNF3Q12674 1656 aa-0.14□□□□□ -2.43
RFA3YJL173C YDR029WQ12111 104 aa-0.15□□□□□ -2.43
RFA3YJL173C YBR201C-AQ2V2Q3 67 aa-0.15□□□□□ -2.43
RFA3YJL173C YGR025WP53216 100 aa-0.16□□□□□ -2.44
RFA3YJL173C TY1B-LR3P0C2I6 1755 aaKnown RBP-0.17□□□□□ -2.44
RFA3YJL173C TY1B-PR3P0C2J1 1755 aaKnown RBP-0.17□□□□□ -2.44
RFA3YJL173C YHR214C-DP0CX93 97 aa-0.17□□□□□ -2.44
RFA3YJL173C YDR381C-AQ3E6R5 114 aa-0.17□□□□□ -2.44
RFA3YJL173C SUS1Q6WNK7 96 aa-0.18□□□□□ -2.44
RFA3YJL173C MSL1P40567 111 aaPredicted RBP-0.19□□□□□ -2.44
RFA3YJL173C FYV7Q12247 151 aa-0.19□□□□□ -2.44
RFA3YJL173C SDH6Q3E785 79 aa-0.2□□□□□ -2.44
RFA3YJL173C MHF2Q3E829 80 aa-0.2□□□□□ -2.44
RFA3YJL173C NHP2P32495 156 aaPredicted RBP-0.21□□□□□ -2.44
RFA3YJL173C YKL068W-AQ3E826 78 aa-0.21□□□□□ -2.44
RFA3YJL173C HKR1P41809 1802 aa-0.22□□□□□ -2.44
RFA3YJL173C RPA190P10964 1664 aaKnown RBP-0.22□□□□□ -2.44
RFA3YJL173C TY1B-PR2P0C2J0 1756 aa-0.22□□□□□ -2.45
RFA3YJL173C YAL065CO13511 128 aa-0.23□□□□□ -2.45
RFA3YJL173C ATP18P81450 59 aa-0.23□□□□□ -2.45
RFA3YJL173C RRT15Q3E811 62 aa-0.23□□□□□ -2.45
RFA3YJL173C YCR108CQ3E819 63 aa-0.24□□□□□ -2.45
RFA3YJL173C YMR122W-AQ3E842 84 aa-0.24□□□□□ -2.45
RFA3YJL173C EDC1P53080 175 aaPredicted RBP-0.26□□□□□ -2.45
RFA3YJL173C SEN1Q00416 2231 aaKnown RBP-0.27□□□□□ -2.45
RFA3YJL173C TY1B-DR6P0C2I3 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C TY1B-LR2P0C2I5 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C TY1B-JR2P47100 1755 aaKnown RBP-0.27□□□□□ -2.45
RFA3YJL173C TY1B-MR1Q04214 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C TY1B-MR2Q04670 1755 aaKnown RBP-0.27□□□□□ -2.45
RFA3YJL173C TY1B-NL1Q12112 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C TY1B-GR1Q12141 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C TY1B-GR3Q12316 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C TY1B-PLQ12414 1755 aaKnown RBP-0.27□□□□□ -2.45
RFA3YJL173C TY1B-ORQ92393 1755 aa-0.27□□□□□ -2.45
RFA3YJL173C ZEO1Q08245 113 aa-0.28□□□□□ -2.45
RFA3YJL173C YCR085WP25650 117 aa-0.29□□□□□ -2.46
RFA3YJL173C FPR2P32472 135 aa-0.29□□□□□ -2.46
RFA3YJL173C YDR042CQ03205 200 aa-0.29□□□□□ -2.46
RFA3YJL173C YDR246W-AQ3E763 66 aa-0.29□□□□□ -2.46
RFA3YJL173C YOL097W-AQ3E7Y9 61 aa-0.3□□□□□ -2.46
RFA3YJL173C ECM12O13529 151 aa-0.31□□□□□ -2.46
RFA3YJL173C YBR032WP38223 100 aa-0.31□□□□□ -2.46
RFA3YJL173C GDB1Q06625 1536 aa-0.33□□□□□ -2.46
RFA3YJL173C POL1P13382 1468 aa-0.33□□□□□ -2.46
RFA3YJL173C UTP20P35194 2493 aaKnown RBP-0.33□□□□□ -2.46
RFA3YJL173C YPR108W-AQ3E7B3 70 aa-0.33□□□□□ -2.46
RFA3YJL173C MOT1P32333 1867 aa-0.33□□□□□ -2.46
RFA3YJL173C BPH1P25356 2167 aa-0.34□□□□□ -2.46
RFA3YJL173C SWR1Q05471 1514 aa-0.34□□□□□ -2.46
RFA3YJL173C SCP1Q08873 200 aa-0.35□□□□□ -2.47
RFA3YJL173C PMD1P32634 1753 aa-0.35□□□□□ -2.47
RFA3YJL173C YCL001W-BQ96VH2 84 aa-0.36□□□□□ -2.47
RFA3YJL173C MMS1Q06211 1407 aa-0.37□□□□□ -2.47
RFA3YJL173C PAU23Q07987 124 aa-0.37□□□□□ -2.47
RFA3YJL173C PAU17Q12370 124 aa-0.37□□□□□ -2.47
RFA3YJL173C YBL044WP38194 122 aa-0.38□□□□□ -2.47
RFA3YJL173C ECM29P38737 1868 aa-0.38□□□□□ -2.47
RFA3YJL173C STT4P37297 1900 aa-0.38□□□□□ -2.47
RFA3YJL173C YPL225WQ08971 146 aaKnown RBP-0.39□□□□□ -2.47
RFA3YJL173C TY1B-DR5P0C2I2 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.4□□□□□ -2.47
RFA3YJL173C TY1B-JR1P47098 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-ML2Q03434 1755 aaKnown RBP-0.4□□□□□ -2.47
RFA3YJL173C TY1B-ER1Q03612 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-ER2Q03619 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-DR1Q03855 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-ML1Q04711 1755 aaKnown RBP-0.4□□□□□ -2.47
RFA3YJL173C TY1B-LR1Q12088 1755 aaKnown RBP-0.4□□□□□ -2.47
RFA3YJL173C TY1B-GR2Q12269 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-OLQ12273 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C TY1B-DR3Q99231 1755 aa-0.4□□□□□ -2.47
RFA3YJL173C RPS29AP41057 56 aaKnown RBP-0.4□□□□□ -2.47
RFA3YJL173C XRN1P22147 1528 aaKnown RBP-0.42□□□□□ -2.48
RFA3YJL173C NOP10Q6Q547 58 aaPredicted RBP-0.42□□□□□ -2.48
RFA3YJL173C PDR10P51533 1564 aa-0.42□□□□□ -2.48
RFA3YJL173C YOR343CQ12484 108 aa-0.44□□□□□ -2.48
RFA3YJL173C YMR082CQ04276 118 aa-0.45□□□□□ -2.48
RFA3YJL173C YMR175W-AQ3E766 64 aa-0.47□□□□□ -2.48
RFA3YJL173C YCR075W-AQ3E830 75 aa-0.47□□□□□ -2.48
RFA3YJL173C YIL156W-BQ2V2P4 73 aa-0.48□□□□□ -2.49
RFA3YJL173C YMR001C-AQ8TGS9 76 aa-0.49□□□□□ -2.49
RFA3YJL173C YOR105WQ08504 108 aa-0.5□□□□□ -2.49
RFA3YJL173C YKL065W-AQ2V2P2 73 aa-0.52□□□□□ -2.49
RFA3YJL173C UTP10P42945 1769 aaKnown RBP-0.53□□□□□ -2.49
RFA3YJL173C POC4Q12245 148 aaPredicted RBP-0.56□□□□□ -2.5
RFA3YJL173C TOR1P35169 2470 aa-0.56□□□□□ -2.5
RFA3YJL173C APC1P53886 1748 aa-0.57□□□□□ -2.5
RFA3YJL173C YDL022C-AP0C5L6 82 aa-0.57□□□□□ -2.5
RFA3YJL173C YOR314WQ12506 109 aa-0.57□□□□□ -2.5
RFA3YJL173C YDR182W-AQ3E796 67 aa-0.57□□□□□ -2.5
RFA3YJL173C YKL018C-AQ3E7A7 99 aa-0.57□□□□□ -2.5
RFA3YJL173C YOR008C-AQ3E7B9 74 aa-0.58□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms