RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W LHP1P33399 275 aaKnown RBP0.89□□□□□ -2.27
MSL1YIR009W YHR130CP38834 111 aa0.89□□□□□ -2.27
MSL1YIR009W RGI1P40043 161 aaPredicted RBP0.89□□□□□ -2.27
MSL1YIR009W TDA2P40045 126 aa0.89□□□□□ -2.27
MSL1YIR009W POR2P40478 281 aa0.89□□□□□ -2.27
MSL1YIR009W RPS12P48589 143 aaKnown RBP0.89□□□□□ -2.27
MSL1YIR009W FIT3Q08907 204 aa0.89□□□□□ -2.27
MSL1YIR009W RPS22BQ3E7Y3 130 aaKnown RBP0.89□□□□□ -2.27
MSL1YIR009W YER137CP40083 148 aaKnown RBP0.88□□□□□ -2.27
MSL1YIR009W YIL163CP40448 117 aa0.88□□□□□ -2.27
MSL1YIR009W GNA1P43577 159 aaPredicted RBP0.88□□□□□ -2.27
MSL1YIR009W RPL22BP56628 122 aaKnown RBP0.88□□□□□ -2.27
MSL1YIR009W UBC5P15732 148 aa0.87□□□□□ -2.27
MSL1YIR009W COX23P38824 151 aa0.87□□□□□ -2.27
MSL1YIR009W YEA6P39953 335 aa0.87□□□□□ -2.27
MSL1YIR009W GTT1P40582 234 aa0.87□□□□□ -2.27
MSL1YIR009W ICS3P47034 131 aa0.87□□□□□ -2.27
MSL1YIR009W HPA2Q06592 156 aa0.87□□□□□ -2.27
MSL1YIR009W OCA6Q12454 224 aa0.87□□□□□ -2.27
MSL1YIR009W RPL22AP05749 121 aaKnown RBP0.86□□□□□ -2.27
MSL1YIR009W PAU2P32612 120 aa0.86□□□□□ -2.27
MSL1YIR009W YBR013CP38215 129 aa0.86□□□□□ -2.27
MSL1YIR009W YBR090CP38253 122 aa0.86□□□□□ -2.27
MSL1YIR009W HUR1P45820 110 aa0.86□□□□□ -2.27
MSL1YIR009W SWC7Q06707 132 aa0.86□□□□□ -2.27
MSL1YIR009W DAD1Q12248 94 aa0.86□□□□□ -2.27
MSL1YIR009W PCC1Q3E833 88 aa0.86□□□□□ -2.27
MSL1YIR009W MED11Q99278 115 aa0.86□□□□□ -2.27
MSL1YIR009W Q0297Q9ZZV8 51 aa0.86□□□□□ -2.27
MSL1YIR009W BPH1P25356 2167 aa0.85□□□□□ -2.27
MSL1YIR009W PAU24P38155 120 aa0.85□□□□□ -2.27
MSL1YIR009W MIC27P50945 234 aa0.85□□□□□ -2.27
MSL1YIR009W YMR103CQ04436 120 aa0.85□□□□□ -2.27
MSL1YIR009W LCL2Q08045 131 aa0.85□□□□□ -2.27
MSL1YIR009W COA6Q3E846 104 aa0.85□□□□□ -2.27
MSL1YIR009W UBC4P15731 148 aa0.84□□□□□ -2.27
MSL1YIR009W SNN1P48232 102 aa0.84□□□□□ -2.27
MSL1YIR009W YOS1Q3E834 85 aa0.84□□□□□ -2.27
MSL1YIR009W YHR213W-BQ8TGK1 99 aa0.84□□□□□ -2.27
MSL1YIR009W BLM10P43583 2143 aa0.83□□□□□ -2.28
MSL1YIR009W RPL37BP51402 88 aaKnown RBP0.83□□□□□ -2.28
MSL1YIR009W YGR035W-AQ45U48 73 aa0.83□□□□□ -2.28
MSL1YIR009W HUG1Q6Q5K6 68 aa0.83□□□□□ -2.28
MSL1YIR009W MRPL31P14063 131 aaPredicted RBP0.82□□□□□ -2.28
MSL1YIR009W YCR101CP25607 182 aa0.82□□□□□ -2.28
MSL1YIR009W HHY1P39982 102 aa0.82□□□□□ -2.28
MSL1YIR009W VMA21P41806 77 aa0.82□□□□□ -2.28
MSL1YIR009W YLR363W-AQ3E747 85 aa0.82□□□□□ -2.28
MSL1YIR009W YLR285C-AQ3E771 56 aa0.82□□□□□ -2.28
MSL1YIR009W YGR240C-AQ3E786 66 aa0.82□□□□□ -2.28
MSL1YIR009W MIC10Q96VH5 97 aa0.82□□□□□ -2.28
MSL1YIR009W STT4P37297 1900 aa0.81□□□□□ -2.28
MSL1YIR009W PAU19P0CE85 124 aa0.81□□□□□ -2.28
MSL1YIR009W PAU3P25610 124 aa0.81□□□□□ -2.28
MSL1YIR009W VPS55P47111 140 aa0.81□□□□□ -2.28
MSL1YIR009W MRPS12P53732 153 aa0.81□□□□□ -2.28
MSL1YIR009W YMR090WQ04304 227 aaKnown RBP0.81□□□□□ -2.28
MSL1YIR009W FYV7Q12247 151 aa0.81□□□□□ -2.28
MSL1YIR009W YCL048W-AQ2V2Q2 79 aa0.81□□□□□ -2.28
MSL1YIR009W YGL041C-BQ3E750 60 aa0.81□□□□□ -2.28
MSL1YIR009W BUD23P25627 275 aaPredicted RBP0.8□□□□□ -2.28
MSL1YIR009W CYB5P40312 120 aa0.8□□□□□ -2.28
MSL1YIR009W MIX14Q04341 121 aa0.8□□□□□ -2.28
MSL1YIR009W YOR032W-AQ8TGS1 66 aa0.8□□□□□ -2.28
MSL1YIR009W ENV10Q99382 181 aa0.8□□□□□ -2.28
MSL1YIR009W YMR141CP40211 102 aa0.79□□□□□ -2.28
MSL1YIR009W YOR289WQ12012 251 aaPredicted RBP0.79□□□□□ -2.28
MSL1YIR009W KSH1Q8TGJ3 72 aa0.79□□□□□ -2.28
MSL1YIR009W HMRA2P0CY13 119 aa0.78□□□□□ -2.28
MSL1YIR009W PAU16P35994 123 aa0.78□□□□□ -2.28
MSL1YIR009W PAU15P40585 124 aa0.78□□□□□ -2.28
MSL1YIR009W MVB12P42939 101 aa0.78□□□□□ -2.28
MSL1YIR009W LCL1Q02786 101 aa0.78□□□□□ -2.28
MSL1YIR009W YDR210WQ03482 75 aa0.78□□□□□ -2.28
MSL1YIR009W YHR138CP38841 114 aaPredicted RBP0.77□□□□□ -2.29
MSL1YIR009W YIL086CP40503 102 aa0.77□□□□□ -2.29
MSL1YIR009W YJR128WP47162 119 aa0.76□□□□□ -2.29
MSL1YIR009W LSM6Q06406 86 aaKnown RBP0.76□□□□□ -2.29
MSL1YIR009W YOR034C-AQ3E735 80 aa0.76□□□□□ -2.29
MSL1YIR009W YLR255CO13574 117 aa0.75□□□□□ -2.29
MSL1YIR009W YOL118CQ08259 102 aa0.75□□□□□ -2.29
MSL1YIR009W YHL005CP38752 130 aa0.74□□□□□ -2.29
MSL1YIR009W YPL225WQ08971 146 aaKnown RBP0.74□□□□□ -2.29
MSL1YIR009W RSM19P53733 91 aaPredicted RBP0.73□□□□□ -2.29
MSL1YIR009W RPS29AP41057 56 aaKnown RBP0.72□□□□□ -2.29
MSL1YIR009W IMP2P46972 177 aa0.72□□□□□ -2.29
MSL1YIR009W ZEO1Q08245 113 aa0.72□□□□□ -2.29
MSL1YIR009W YER188C-AP0C0V2 99 aa0.71□□□□□ -2.3
MSL1YIR009W ROX3P25046 220 aa0.71□□□□□ -2.3
MSL1YIR009W PAU5P43575 122 aa0.71□□□□□ -2.3
MSL1YIR009W COX19Q3E731 98 aa0.71□□□□□ -2.3
MSL1YIR009W SRB6P32570 121 aa0.7□□□□□ -2.3
MSL1YIR009W COX12Q01519 83 aa0.7□□□□□ -2.3
MSL1YIR009W RRT15Q3E811 62 aa0.7□□□□□ -2.3
MSL1YIR009W YLR307C-AQ3E825 87 aa0.7□□□□□ -2.3
MSL1YIR009W MLP1Q02455 1875 aaKnown RBP0.69□□□□□ -2.3
MSL1YIR009W YLR157W-EP0CF00 54 aa0.69□□□□□ -2.3
MSL1YIR009W AUA1P32450 94 aa0.69□□□□□ -2.3
MSL1YIR009W YCR095W-AQ3E787 52 aa0.69□□□□□ -2.3
MSL1YIR009W YPL038W-AQ3E7B4 63 aa0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms