RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeastyeast

Gene YPT35, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT35YHR105W YOR008C-AQ3E7B9 74 aa2.46□□□□□ -2.02
YPT35YHR105W POL2P21951 2222 aaKnown RBP2.46□□□□□ -2.02
YPT35YHR105W YLR156WP0CE96 114 aa2.45□□□□□ -2.02
YPT35YHR105W YLR159WP0CE97 114 aa2.45□□□□□ -2.02
YPT35YHR105W YLR161WP0CE98 114 aa2.45□□□□□ -2.02
YPT35YHR105W AIM19P40502 157 aa2.45□□□□□ -2.02
YPT35YHR105W KNH1P50112 268 aa2.45□□□□□ -2.02
YPT35YHR105W SBH2P52871 88 aa2.45□□□□□ -2.02
YPT35YHR105W AIM34Q03673 198 aa2.45□□□□□ -2.02
YPT35YHR105W SEC16P48415 2195 aaKnown RBP2.44□□□□□ -2.02
YPT35YHR105W YDL022C-AP0C5L6 82 aa2.44□□□□□ -2.02
YPT35YHR105W PBI2P0CT04 75 aaKnown RBP2.44□□□□□ -2.02
YPT35YHR105W ATP15P21306 62 aa2.44□□□□□ -2.02
YPT35YHR105W TOM6P33448 61 aa2.44□□□□□ -2.02
YPT35YHR105W VPS55P47111 140 aa2.44□□□□□ -2.02
YPT35YHR105W EMC6Q12431 108 aa2.44□□□□□ -2.02
YPT35YHR105W YFR032C-BQ8TGU2 87 aa2.44□□□□□ -2.02
YPT35YHR105W FAS1P07149 2051 aaKnown RBP2.44□□□□□ -2.02
YPT35YHR105W RPL39P04650 51 aa2.43□□□□□ -2.02
YPT35YHR105W YER039C-AP0CD97 72 aa2.43□□□□□ -2.02
YPT35YHR105W GLE2P40066 365 aa2.43□□□□□ -2.02
YPT35YHR105W YER121WP40076 114 aa2.43□□□□□ -2.02
YPT35YHR105W YJL027CP47063 138 aaPredicted RBP2.43□□□□□ -2.02
YPT35YHR105W SHH4Q06236 168 aa2.43□□□□□ -2.02
YPT35YHR105W YPL038W-AQ3E7B4 63 aa2.43□□□□□ -2.02
YPT35YHR105W TOM1Q03280 3268 aa2.43□□□□□ -2.02
YPT35YHR105W BRR2P32639 2163 aaKnown RBP2.43□□□□□ -2.02
YPT35YHR105W UBC5P15732 148 aa2.42□□□□□ -2.02
YPT35YHR105W MPC2P38857 129 aa2.42□□□□□ -2.02
YPT35YHR105W POR2P40478 281 aa2.42□□□□□ -2.02
YPT35YHR105W DCV1P43595 202 aa2.42□□□□□ -2.02
YPT35YHR105W HUR1P45820 110 aa2.42□□□□□ -2.02
YPT35YHR105W SBH1P52870 82 aa2.42□□□□□ -2.02
YPT35YHR105W IRC23Q08416 157 aa2.42□□□□□ -2.02
YPT35YHR105W YDR381C-AQ3E6R5 114 aa2.42□□□□□ -2.02
YPT35YHR105W YMR105W-AQ8TGS8 64 aa2.42□□□□□ -2.02
YPT35YHR105W RPL2AP0CX45 254 aaKnown RBP2.41□□□□□ -2.02
YPT35YHR105W RPL2BP0CX46 254 aaKnown RBP2.41□□□□□ -2.02
YPT35YHR105W MRPL38P35996 138 aaPredicted RBP2.41□□□□□ -2.02
YPT35YHR105W YKR045CP36138 183 aa2.41□□□□□ -2.02
YPT35YHR105W YSY6P38374 65 aa2.41□□□□□ -2.02
YPT35YHR105W YGR219WP53307 113 aa2.41□□□□□ -2.02
YPT35YHR105W YNL190WP53872 204 aa2.41□□□□□ -2.02
YPT35YHR105W ACC1Q00955 2233 aaKnown RBP2.4□□□□□ -2.03
YPT35YHR105W QCR8P08525 94 aa2.4□□□□□ -2.03
YPT35YHR105W YCR050CP25630 102 aa2.4□□□□□ -2.03
YPT35YHR105W SHU1P38751 150 aa2.4□□□□□ -2.03
YPT35YHR105W MRPS12P53732 153 aa2.4□□□□□ -2.03
YPT35YHR105W BEM2P39960 2167 aaKnown RBP2.39□□□□□ -2.03
YPT35YHR105W YHL018WP38744 120 aaPredicted RBP2.39□□□□□ -2.03
YPT35YHR105W KTI11Q3E840 82 aa2.39□□□□□ -2.03
YPT35YHR105W YHR022CP38763 256 aa2.38□□□□□ -2.03
YPT35YHR105W SVP26P38869 228 aa2.38□□□□□ -2.03
YPT35YHR105W SED1Q01589 338 aa2.38□□□□□ -2.03
YPT35YHR105W YLR042CQ07990 161 aa2.38□□□□□ -2.03
YPT35YHR105W YBR200W-AQ3E755 54 aa2.38□□□□□ -2.03
YPT35YHR105W SEN1Q00416 2231 aaKnown RBP2.37□□□□□ -2.03
YPT35YHR105W RPS28BP0C0X0 67 aaKnown RBP2.37□□□□□ -2.03
YPT35YHR105W YBR209WP38311 105 aa2.37□□□□□ -2.03
YPT35YHR105W RGM1Q00453 211 aa2.37□□□□□ -2.03
YPT35YHR105W YLR285C-AQ3E771 56 aa2.37□□□□□ -2.03
YPT35YHR105W RPS28AQ3E7X9 67 aaPredicted RBP2.37□□□□□ -2.03
YPT35YHR105W BET1P22804 142 aa2.36□□□□□ -2.03
YPT35YHR105W YRA2P36036 203 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YPT35YHR105W YAR029WP39549 74 aa2.36□□□□□ -2.03
YPT35YHR105W YEL008WP40001 126 aa2.36□□□□□ -2.03
YPT35YHR105W IRC21Q04772 201 aa2.36□□□□□ -2.03
YPT35YHR105W CCW12Q12127 133 aa2.36□□□□□ -2.03
YPT35YHR105W YLR412C-AQ3E742 68 aa2.36□□□□□ -2.03
YPT35YHR105W YJR107C-AP0CT86 78 aa2.35□□□□□ -2.03
YPT35YHR105W YER187WP40102 141 aa2.35□□□□□ -2.03
YPT35YHR105W MRPS8Q03799 155 aa2.35□□□□□ -2.03
YPT35YHR105W YCL048W-AQ2V2Q2 79 aa2.35□□□□□ -2.03
YPT35YHR105W YLR236CA0A023PZG4 107 aa2.34□□□□□ -2.03
YPT35YHR105W YGR025WP53216 100 aa2.34□□□□□ -2.03
YPT35YHR105W ATP18P81450 59 aa2.34□□□□□ -2.03
YPT35YHR105W PMP3P87284 55 aa2.34□□□□□ -2.03
YPT35YHR105W YOR034C-AQ3E735 80 aa2.34□□□□□ -2.03
YPT35YHR105W YNL146C-AQ3E7Z1 64 aa2.34□□□□□ -2.03
YPT35YHR105W YOR011W-AQ3E807 68 aa2.34□□□□□ -2.03
YPT35YHR105W VPS13Q07878 3144 aa2.34□□□□□ -2.04
YPT35YHR105W UBC4P15731 148 aa2.33□□□□□ -2.04
YPT35YHR105W AIM4P38305 123 aaPredicted RBP2.33□□□□□ -2.04
YPT35YHR105W YHL037CP38733 133 aa2.33□□□□□ -2.04
YPT35YHR105W YGR164WP53291 111 aa2.33□□□□□ -2.04
YPT35YHR105W ATP20Q12233 115 aa2.33□□□□□ -2.04
YPT35YHR105W TSC3Q3E790 80 aa2.33□□□□□ -2.04
YPT35YHR105W TAO3P40468 2376 aa2.32□□□□□ -2.04
YPT35YHR105W TDA2P40045 126 aa2.32□□□□□ -2.04
YPT35YHR105W RPL33BP41056 107 aaKnown RBP2.32□□□□□ -2.04
YPT35YHR105W RPL38P49167 78 aaKnown RBP2.32□□□□□ -2.04
YPT35YHR105W RSM19P53733 91 aaPredicted RBP2.32□□□□□ -2.04
YPT35YHR105W YMR295CQ03559 197 aa2.32□□□□□ -2.04
YPT35YHR105W YOR314WQ12506 109 aa2.32□□□□□ -2.04
YPT35YHR105W YMR175W-AQ3E766 64 aa2.32□□□□□ -2.04
YPT35YHR105W YLL006W-AQ3E814 58 aa2.32□□□□□ -2.04
YPT35YHR105W KSH1Q8TGJ3 72 aa2.32□□□□□ -2.04
YPT35YHR105W YER135CP40082 130 aa2.31□□□□□ -2.04
YPT35YHR105W YFR035CP43608 114 aa2.31□□□□□ -2.04
YPT35YHR105W MPC3P53311 146 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms