RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C HAL1Q01766 294 aa4.35□□□□□ -1.71
SFB3YHR098C UBC4P15731 148 aa4.35□□□□□ -1.71
SFB3YHR098C YAR029WP39549 74 aa4.35□□□□□ -1.71
SFB3YHR098C SHU1P38751 150 aa4.34□□□□□ -1.71
SFB3YHR098C YFL019CP43576 117 aa4.34□□□□□ -1.71
SFB3YHR098C YGR219WP53307 113 aa4.34□□□□□ -1.71
SFB3YHR098C YOL085CQ99345 113 aa4.34□□□□□ -1.71
SFB3YHR098C YHR022CP38763 256 aa4.34□□□□□ -1.72
SFB3YHR098C SIP18P50263 79 aa4.34□□□□□ -1.72
SFB3YHR098C YGR164WP53291 111 aa4.34□□□□□ -1.72
SFB3YHR098C YNL234WP53857 426 aa4.34□□□□□ -1.72
SFB3YHR098C YLR122CQ12312 125 aa4.34□□□□□ -1.72
SFB3YHR098C YLR156WP0CE96 114 aa4.33□□□□□ -1.72
SFB3YHR098C YLR159WP0CE97 114 aa4.33□□□□□ -1.72
SFB3YHR098C YLR161WP0CE98 114 aa4.33□□□□□ -1.72
SFB3YHR098C RRT15Q3E811 62 aa4.33□□□□□ -1.72
SFB3YHR098C TDA8Q6B2U8 126 aa4.33□□□□□ -1.72
SFB3YHR098C CTR2P38865 189 aa4.32□□□□□ -1.72
SFB3YHR098C KEG1P43614 200 aa4.32□□□□□ -1.72
SFB3YHR098C EDC1P53080 175 aaPredicted RBP4.32□□□□□ -1.72
SFB3YHR098C ARC15P40518 154 aaRIP-Chip data4.31□□□□□ -1.72not detected
SFB3YHR098C YGL088WP53151 121 aa4.31□□□□□ -1.72
SFB3YHR098C WWM1P43582 211 aaKnown RBP4.31□□□□□ -1.72
SFB3YHR098C AIM4P38305 123 aaPredicted RBP4.31□□□□□ -1.72
SFB3YHR098C ERI1P62651 68 aaKnown RBP4.31□□□□□ -1.72
SFB3YHR098C IRC21Q04772 201 aa4.31□□□□□ -1.72
SFB3YHR098C YNL277W-AQ3E7Z0 62 aa4.31□□□□□ -1.72
SFB3YHR098C YOR268CQ08734 132 aa4.3□□□□□ -1.72
SFB3YHR098C ATP20Q12233 115 aa4.3□□□□□ -1.72
SFB3YHR098C MRPL38P35996 138 aaPredicted RBP4.3□□□□□ -1.72
SFB3YHR098C MIG3P39943 394 aa4.3□□□□□ -1.72
SFB3YHR098C RGM1Q00453 211 aa4.3□□□□□ -1.72
SFB3YHR098C YBR200W-AQ3E755 54 aa4.3□□□□□ -1.72
SFB3YHR098C BPH1P25356 2167 aa4.28□□□□□ -1.72
SFB3YHR098C SPS100P13130 326 aa4.28□□□□□ -1.72
SFB3YHR098C YOR032W-AQ8TGS1 66 aa4.28□□□□□ -1.72
SFB3YHR098C QCR8P08525 94 aa4.27□□□□□ -1.73
SFB3YHR098C YJR107C-AP0CT86 78 aa4.27□□□□□ -1.73
SFB3YHR098C YEL008WP40001 126 aa4.27□□□□□ -1.73
SFB3YHR098C ICY1Q04329 127 aa4.27□□□□□ -1.73
SFB3YHR098C YGL034CP53186 121 aa4.26□□□□□ -1.73
SFB3YHR098C SRL1Q08673 210 aa4.26□□□□□ -1.73
SFB3YHR098C POR2P40478 281 aa4.25□□□□□ -1.73
SFB3YHR098C RSM19P53733 91 aaPredicted RBP4.25□□□□□ -1.73
SFB3YHR098C YLR236CA0A023PZG4 107 aa4.25□□□□□ -1.73
SFB3YHR098C RPS23AP0CX29 145 aaKnown RBP4.25□□□□□ -1.73
SFB3YHR098C RPS23BP0CX30 145 aa4.25□□□□□ -1.73
SFB3YHR098C SPT4P32914 102 aaPredicted RBP4.25□□□□□ -1.73
SFB3YHR098C UTH1P36135 365 aa4.25□□□□□ -1.73
SFB3YHR098C MMS2P53152 137 aa4.25□□□□□ -1.73
SFB3YHR098C MIC10Q96VH5 97 aa4.25□□□□□ -1.73
SFB3YHR098C YCR041WP37265 110 aa4.24□□□□□ -1.73
SFB3YHR098C ICS3P47034 131 aa4.24□□□□□ -1.73
SFB3YHR098C YPS5P53057 165 aa4.23□□□□□ -1.73
SFB3YHR098C MPC3P53311 146 aa4.23□□□□□ -1.73
SFB3YHR098C PEX22P39718 180 aa4.23□□□□□ -1.73
SFB3YHR098C YFR035CP43608 114 aa4.23□□□□□ -1.73
SFB3YHR098C RPL38P49167 78 aaKnown RBP4.23□□□□□ -1.73
SFB3YHR098C YNL046WP53956 172 aa4.23□□□□□ -1.73
SFB3YHR098C NOP10Q6Q547 58 aaPredicted RBP4.23□□□□□ -1.73
SFB3YHR098C ATP18P81450 59 aa4.22□□□□□ -1.73
SFB3YHR098C SPG4Q04438 115 aa4.22□□□□□ -1.73
SFB3YHR098C YAL065CO13511 128 aa4.21□□□□□ -1.73
SFB3YHR098C YOR381W-AQ3E804 55 aa4.21□□□□□ -1.73
SFB3YHR098C YGR121W-AQ3E816 71 aa4.21□□□□□ -1.73
SFB3YHR098C RPL26AP05743 127 aaKnown RBP4.21□□□□□ -1.74
SFB3YHR098C GAT4P40569 121 aa4.21□□□□□ -1.74
SFB3YHR098C RPL26BP53221 127 aaKnown RBP4.21□□□□□ -1.74
SFB3YHR098C YMR295CQ03559 197 aa4.21□□□□□ -1.74
SFB3YHR098C CSF1Q12150 2958 aa4.21□□□□□ -1.74
SFB3YHR098C SED1Q01589 338 aa4.2□□□□□ -1.74
SFB3YHR098C YLR162WQ06235 118 aa4.2□□□□□ -1.74
SFB3YHR098C CCW12Q12127 133 aa4.2□□□□□ -1.74
SFB3YHR098C RSM18P40033 138 aa4.19□□□□□ -1.74
SFB3YHR098C YDR274CP87283 123 aa4.19□□□□□ -1.74
SFB3YHR098C YLL006W-AQ3E814 58 aa4.19□□□□□ -1.74
SFB3YHR098C YOR020W-AQ3E824 90 aa4.19□□□□□ -1.74
SFB3YHR098C YHL037CP38733 133 aa4.19□□□□□ -1.74
SFB3YHR098C RPR2P40571 144 aa4.19□□□□□ -1.74
SFB3YHR098C YOR011W-AQ3E807 68 aa4.19□□□□□ -1.74
SFB3YHR098C YPR013CQ12145 317 aa4.19□□□□□ -1.74
SFB3YHR098C YFR009W-AP0C5M9 85 aa4.18□□□□□ -1.74
SFB3YHR098C YBL081WP38180 368 aaKnown RBP4.18□□□□□ -1.74
SFB3YHR098C COX14P39103 70 aa4.18□□□□□ -1.74
SFB3YHR098C YOR314WQ12506 109 aa4.18□□□□□ -1.74
SFB3YHR098C YBR219CP38317 127 aa4.17□□□□□ -1.74
SFB3YHR098C YCL048W-AQ2V2Q2 79 aa4.17□□□□□ -1.74
SFB3YHR098C YOR376W-AQ3E805 51 aa4.17□□□□□ -1.74
SFB3YHR098C YOL166W-AQ8TGJ1 51 aa4.17□□□□□ -1.74
SFB3YHR098C HHF1P02309 103 aaKnown RBP4.16□□□□□ -1.74
SFB3YHR098C YHL005CP38752 130 aa4.16□□□□□ -1.74
SFB3YHR098C YER135CP40082 130 aa4.16□□□□□ -1.74
SFB3YHR098C RPL36BO14455 100 aaKnown RBP4.16□□□□□ -1.74
SFB3YHR098C RPL36AP05745 100 aaPredicted RBP4.16□□□□□ -1.74
SFB3YHR098C TDA2P40045 126 aa4.15□□□□□ -1.74
SFB3YHR098C YIR020CP40575 100 aa4.15□□□□□ -1.74
SFB3YHR098C SMD1Q02260 146 aaPredicted RBP4.15□□□□□ -1.74
SFB3YHR098C VAM10Q08474 114 aa4.15□□□□□ -1.75
SFB3YHR098C YDR182W-AQ3E796 67 aa4.14□□□□□ -1.75
SFB3YHR098C YGR035W-AQ45U48 73 aa4.14□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms