RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C SIM1P40472 476 aa5.51□□□□□ -1.53
PRB1YEL060C YML122CQ03207 126 aa5.51□□□□□ -1.53
PRB1YEL060C YLR412C-AQ3E742 68 aa5.51□□□□□ -1.53
PRB1YEL060C YBR209WP38311 105 aa5.5□□□□□ -1.53
PRB1YEL060C PEX22P39718 180 aa5.5□□□□□ -1.53
PRB1YEL060C RRT13P40042 185 aa5.5□□□□□ -1.53
PRB1YEL060C SFT1P43682 97 aa5.5□□□□□ -1.53
PRB1YEL060C YGL088WP53151 121 aa5.5□□□□□ -1.53
PRB1YEL060C RGM1Q00453 211 aa5.5□□□□□ -1.53
PRB1YEL060C RPL2AP0CX45 254 aaKnown RBP5.5□□□□□ -1.53
PRB1YEL060C RPL2BP0CX46 254 aaKnown RBP5.5□□□□□ -1.53
PRB1YEL060C YHL018WP38744 120 aaPredicted RBP5.5□□□□□ -1.53
PRB1YEL060C YNL146C-AQ3E7Z1 64 aa5.49□□□□□ -1.53
PRB1YEL060C YOR011W-AQ3E807 68 aa5.49□□□□□ -1.53
PRB1YEL060C YSY6P38374 65 aa5.48□□□□□ -1.53
PRB1YEL060C KRE9P39005 276 aa5.48□□□□□ -1.53
PRB1YEL060C PPT2Q12036 173 aa5.48□□□□□ -1.53
PRB1YEL060C YPR013CQ12145 317 aa5.48□□□□□ -1.53
PRB1YEL060C YNL277W-AQ3E7Z0 62 aa5.48□□□□□ -1.53
PRB1YEL060C YER135CP40082 130 aa5.47□□□□□ -1.53
PRB1YEL060C ARC15P40518 154 aaRIP-Chip data5.47□□□□□ -1.53 RIP-Chip
PRB1YEL060C YOR034C-AQ3E735 80 aa5.46□□□□□ -1.53
PRB1YEL060C YPR117WQ06116 2489 aa5.46□□□□□ -1.54
PRB1YEL060C FMP27Q06179 2628 aa5.46□□□□□ -1.54
PRB1YEL060C YCR050CP25630 102 aa5.44□□□□□ -1.54
PRB1YEL060C YOR020W-AQ3E824 90 aa5.43□□□□□ -1.54
PRB1YEL060C YLR236CA0A023PZG4 107 aa5.42□□□□□ -1.54
PRB1YEL060C MIG3P39943 394 aa5.42□□□□□ -1.54
PRB1YEL060C YER187WP40102 141 aa5.42□□□□□ -1.54
PRB1YEL060C YMR295CQ03559 197 aa5.42□□□□□ -1.54
PRB1YEL060C IRC21Q04772 201 aa5.42□□□□□ -1.54
PRB1YEL060C YLR285C-AQ3E771 56 aa5.42□□□□□ -1.54
PRB1YEL060C YJR107C-AP0CT86 78 aa5.42□□□□□ -1.54
PRB1YEL060C RPR2P40571 144 aa5.42□□□□□ -1.54
PRB1YEL060C COX14P39103 70 aa5.41□□□□□ -1.54
PRB1YEL060C YFR035CP43608 114 aa5.41□□□□□ -1.54
PRB1YEL060C TOS8P53147 276 aa5.41□□□□□ -1.54
PRB1YEL060C YGR164WP53291 111 aa5.4□□□□□ -1.54
PRB1YEL060C YMR244WQ04018 355 aa5.4□□□□□ -1.54
PRB1YEL060C KSH1Q8TGJ3 72 aa5.4□□□□□ -1.54
PRB1YEL060C PMP3P87284 55 aa5.4□□□□□ -1.55
PRB1YEL060C MRPS8Q03799 155 aa5.39□□□□□ -1.55
PRB1YEL060C YAR029WP39549 74 aa5.38□□□□□ -1.55
PRB1YEL060C YLR156WP0CE96 114 aa5.38□□□□□ -1.55
PRB1YEL060C YLR159WP0CE97 114 aa5.38□□□□□ -1.55
PRB1YEL060C YLR161WP0CE98 114 aa5.38□□□□□ -1.55
PRB1YEL060C YLL006W-AQ3E814 58 aa5.38□□□□□ -1.55
PRB1YEL060C IRA1P18963 3092 aa5.37□□□□□ -1.55
PRB1YEL060C YBR219CP38317 127 aa5.37□□□□□ -1.55
PRB1YEL060C YLR281CQ05863 155 aa5.36□□□□□ -1.55
PRB1YEL060C VAM10Q08474 114 aa5.36□□□□□ -1.55
PRB1YEL060C YDR246W-AQ3E763 66 aa5.36□□□□□ -1.55
PRB1YEL060C YMR175W-AQ3E766 64 aa5.36□□□□□ -1.55
PRB1YEL060C SPS100P13130 326 aa5.36□□□□□ -1.55
PRB1YEL060C YIR020CP40575 100 aa5.36□□□□□ -1.55
PRB1YEL060C EDC1P53080 175 aaPredicted RBP5.36□□□□□ -1.55
PRB1YEL060C HAL1Q01766 294 aa5.36□□□□□ -1.55
PRB1YEL060C GAT4P40569 121 aa5.35□□□□□ -1.55
PRB1YEL060C HOR7Q05827 59 aa5.35□□□□□ -1.55
PRB1YEL060C YRA2P36036 203 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
PRB1YEL060C MPC3P53311 146 aa5.35□□□□□ -1.55
PRB1YEL060C TRA1P38811 3744 aa5.34□□□□□ -1.55
PRB1YEL060C YGL260WP53056 76 aa5.34□□□□□ -1.55
PRB1YEL060C ATP18P81450 59 aa5.34□□□□□ -1.55
PRB1YEL060C SPT4P32914 102 aaPredicted RBP5.33□□□□□ -1.56
PRB1YEL060C YBL081WP38180 368 aaKnown RBP5.33□□□□□ -1.56
PRB1YEL060C TMC1Q08422 150 aaPredicted RBP5.33□□□□□ -1.56
PRB1YEL060C BET1P22804 142 aa5.33□□□□□ -1.56
PRB1YEL060C YPS5P53057 165 aa5.33□□□□□ -1.56
PRB1YEL060C SPG4Q04438 115 aa5.33□□□□□ -1.56
PRB1YEL060C ATP20Q12233 115 aa5.33□□□□□ -1.56
PRB1YEL060C AIM4P38305 123 aaPredicted RBP5.32□□□□□ -1.56
PRB1YEL060C RPS11AP0CX47 156 aaKnown RBP5.31□□□□□ -1.56
PRB1YEL060C RPS11BP0CX48 156 aaKnown RBP5.31□□□□□ -1.56
PRB1YEL060C ICY1Q04329 127 aa5.31□□□□□ -1.56
PRB1YEL060C SRL1Q08673 210 aa5.31□□□□□ -1.56
PRB1YEL060C TAR1Q8TGM6 124 aa5.31□□□□□ -1.56
PRB1YEL060C RSM19P53733 91 aaPredicted RBP5.3□□□□□ -1.56
PRB1YEL060C UBC4P15731 148 aa5.29□□□□□ -1.56
PRB1YEL060C RPL38P49167 78 aaKnown RBP5.29□□□□□ -1.56
PRB1YEL060C YER175W-AQ8TGU4 54 aa5.29□□□□□ -1.56
PRB1YEL060C YFR009W-AP0C5M9 85 aa5.29□□□□□ -1.56
PRB1YEL060C YAL065CO13511 128 aa5.28□□□□□ -1.56
PRB1YEL060C ERI1P62651 68 aaKnown RBP5.27□□□□□ -1.57
PRB1YEL060C YMR122W-AQ3E842 84 aa5.27□□□□□ -1.57
PRB1YEL060C RSM18P40033 138 aa5.27□□□□□ -1.57
PRB1YEL060C TDA2P40045 126 aa5.26□□□□□ -1.57
PRB1YEL060C TSC3Q3E790 80 aa5.26□□□□□ -1.57
PRB1YEL060C RPL29P05747 59 aaPredicted RBP5.25□□□□□ -1.57
PRB1YEL060C YOR314WQ12506 109 aa5.25□□□□□ -1.57
PRB1YEL060C NOP10Q6Q547 58 aaPredicted RBP5.25□□□□□ -1.57
PRB1YEL060C SMD1Q02260 146 aaPredicted RBP5.24□□□□□ -1.57
PRB1YEL060C YPL278CQ08990 100 aa5.24□□□□□ -1.57
PRB1YEL060C RRT15Q3E811 62 aa5.24□□□□□ -1.57
PRB1YEL060C TDA8Q6B2U8 126 aa5.24□□□□□ -1.57
PRB1YEL060C CRC1Q12289 327 aa5.23□□□□□ -1.57
PRB1YEL060C URA2P07259 2214 aaKnown RBP5.23□□□□□ -1.57
PRB1YEL060C MRP10O75012 95 aa5.23□□□□□ -1.57
PRB1YEL060C YFL019CP43576 117 aa5.23□□□□□ -1.57
PRB1YEL060C YGL034CP53186 121 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms