RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W YOL160WQ08321 113 aa1.85□□□□□ -2.11
SPF1YEL031W PRM7Q12459 698 aa1.85□□□□□ -2.11
SPF1YEL031W YMR105W-AQ8TGS8 64 aa1.85□□□□□ -2.11
SPF1YEL031W UBC11P52492 156 aa1.85□□□□□ -2.11
SPF1YEL031W YMR320WQ04897 101 aa1.85□□□□□ -2.11
SPF1YEL031W YNL146C-AQ3E7Z1 64 aa1.85□□□□□ -2.11
SPF1YEL031W RPL26AP05743 127 aaKnown RBP1.84□□□□□ -2.11
SPF1YEL031W YLR156WP0CE96 114 aa1.84□□□□□ -2.11
SPF1YEL031W YLR159WP0CE97 114 aa1.84□□□□□ -2.11
SPF1YEL031W YLR161WP0CE98 114 aa1.84□□□□□ -2.11
SPF1YEL031W RSM18P40033 138 aa1.84□□□□□ -2.11
SPF1YEL031W RPL26BP53221 127 aaKnown RBP1.84□□□□□ -2.11
SPF1YEL031W YNL190WP53872 204 aa1.84□□□□□ -2.11
SPF1YEL031W SPG4Q04438 115 aa1.84□□□□□ -2.11
SPF1YEL031W CRC1Q12289 327 aa1.84□□□□□ -2.11
SPF1YEL031W YIL046W-AQ3E7Z4 54 aa1.84□□□□□ -2.11
SPF1YEL031W YBR126W-AQ8TGU7 68 aa1.84□□□□□ -2.11
SPF1YEL031W RPL15AP05748 204 aaKnown RBP1.84□□□□□ -2.11
SPF1YEL031W MIG3P39943 394 aa1.84□□□□□ -2.11
SPF1YEL031W YEL008WP40001 126 aa1.84□□□□□ -2.11
SPF1YEL031W NRM1P53718 249 aa1.84□□□□□ -2.11
SPF1YEL031W YLR281CQ05863 155 aa1.84□□□□□ -2.11
SPF1YEL031W CYR1P08678 2026 aaKnown RBP1.84□□□□□ -2.12
SPF1YEL031W MPC3P53311 146 aa1.84□□□□□ -2.12
SPF1YEL031W YDR114CQ04597 100 aa1.84□□□□□ -2.12
SPF1YEL031W COX14P39103 70 aa1.83□□□□□ -2.12
SPF1YEL031W ERI1P62651 68 aaKnown RBP1.83□□□□□ -2.12
SPF1YEL031W RPL39P04650 51 aa1.83□□□□□ -2.12
SPF1YEL031W SPT4P32914 102 aaPredicted RBP1.83□□□□□ -2.12
SPF1YEL031W YKR045CP36138 183 aa1.83□□□□□ -2.12
SPF1YEL031W YBR209WP38311 105 aa1.83□□□□□ -2.12
SPF1YEL031W ICY1Q04329 127 aa1.83□□□□□ -2.12
SPF1YEL031W SRL1Q08673 210 aa1.83□□□□□ -2.12
SPF1YEL031W COX17Q12287 69 aa1.83□□□□□ -2.12
SPF1YEL031W CDC39P25655 2108 aaKnown RBP1.83□□□□□ -2.12
SPF1YEL031W YHL005CP38752 130 aa1.83□□□□□ -2.12
SPF1YEL031W PEX22P39718 180 aa1.83□□□□□ -2.12
SPF1YEL031W YDL241WQ07738 123 aa1.83□□□□□ -2.12
SPF1YEL031W GAT3Q07928 141 aa1.83□□□□□ -2.12
SPF1YEL031W YLL006W-AQ3E814 58 aa1.83□□□□□ -2.12
SPF1YEL031W RPL29P05747 59 aaPredicted RBP1.82□□□□□ -2.12
SPF1YEL031W YFL015CP43578 164 aa1.82□□□□□ -2.12
SPF1YEL031W SPG1P50088 95 aa1.82□□□□□ -2.12
SPF1YEL031W YPS5P53057 165 aa1.82□□□□□ -2.12
SPF1YEL031W YFR035CP43608 114 aa1.81□□□□□ -2.12
SPF1YEL031W YOR029WQ12243 111 aa1.81□□□□□ -2.12
SPF1YEL031W HUB1Q6Q546 73 aa1.81□□□□□ -2.12
SPF1YEL031W YPR010C-AA5Z2X5 72 aa1.81□□□□□ -2.12
SPF1YEL031W GAT4P40569 121 aa1.81□□□□□ -2.12
SPF1YEL031W HOR7Q05827 59 aa1.81□□□□□ -2.12
SPF1YEL031W VAM10Q08474 114 aa1.81□□□□□ -2.12
SPF1YEL031W YDR246W-AQ3E763 66 aa1.81□□□□□ -2.12
SPF1YEL031W HOT13P36078 116 aa1.81□□□□□ -2.12
SPF1YEL031W RPL38P49167 78 aaKnown RBP1.81□□□□□ -2.12
SPF1YEL031W SED1Q01589 338 aa1.81□□□□□ -2.12
SPF1YEL031W MRPS8Q03799 155 aa1.81□□□□□ -2.12
SPF1YEL031W YOR381W-AQ3E804 55 aa1.81□□□□□ -2.12
SPF1YEL031W YKL097CP34245 136 aa1.8□□□□□ -2.12
SPF1YEL031W YHL037CP38733 133 aa1.8□□□□□ -2.12
SPF1YEL031W KRE9P39005 276 aa1.8□□□□□ -2.12
SPF1YEL031W YIR020CP40575 100 aa1.8□□□□□ -2.12
SPF1YEL031W YFL019CP43576 117 aa1.8□□□□□ -2.12
SPF1YEL031W ICS3P47034 131 aa1.8□□□□□ -2.12
SPF1YEL031W YNL234WP53857 426 aa1.8□□□□□ -2.12
SPF1YEL031W YLR162WQ06235 118 aa1.8□□□□□ -2.12
SPF1YEL031W SPC1P46965 94 aa1.8□□□□□ -2.12
SPF1YEL031W SPO24Q3E752 67 aa1.8□□□□□ -2.12
SPF1YEL031W FAS1P07149 2051 aaKnown RBP1.8□□□□□ -2.12
SPF1YEL031W TDA8Q6B2U8 126 aa1.8□□□□□ -2.12
SPF1YEL031W POL2P21951 2222 aaKnown RBP1.8□□□□□ -2.12
SPF1YEL031W COX23P38824 151 aa1.79□□□□□ -2.12
SPF1YEL031W BLM10P43583 2143 aa1.79□□□□□ -2.12
SPF1YEL031W YMR122W-AQ3E842 84 aa1.79□□□□□ -2.12
SPF1YEL031W OST5Q92316 86 aa1.79□□□□□ -2.12
SPF1YEL031W YMR244WQ04018 355 aa1.79□□□□□ -2.12
SPF1YEL031W BEM2P39960 2167 aaKnown RBP1.79□□□□□ -2.12
SPF1YEL031W RPS11AP0CX47 156 aaKnown RBP1.79□□□□□ -2.12
SPF1YEL031W RPS11BP0CX48 156 aaKnown RBP1.79□□□□□ -2.12
SPF1YEL031W EDC2P40023 145 aaPredicted RBP1.79□□□□□ -2.12
SPF1YEL031W YER135CP40082 130 aa1.79□□□□□ -2.12
SPF1YEL031W TOS8P53147 276 aa1.79□□□□□ -2.12
SPF1YEL031W YGL088WP53151 121 aa1.79□□□□□ -2.12
SPF1YEL031W YOR011W-AQ3E807 68 aa1.79□□□□□ -2.12
SPF1YEL031W MIC10Q96VH5 97 aa1.79□□□□□ -2.12
SPF1YEL031W YBL039W-BP0C268 59 aa1.78□□□□□ -2.12
SPF1YEL031W YGR240C-AQ3E786 66 aa1.78□□□□□ -2.12
SPF1YEL031W NOP10Q6Q547 58 aaPredicted RBP1.78□□□□□ -2.12
SPF1YEL031W YFR009W-AP0C5M9 85 aa1.78□□□□□ -2.12
SPF1YEL031W UTH1P36135 365 aa1.78□□□□□ -2.12
SPF1YEL031W YLR307C-AQ3E825 87 aa1.78□□□□□ -2.12
SPF1YEL031W MVB12P42939 101 aa1.78□□□□□ -2.13
SPF1YEL031W YDR274CP87283 123 aa1.78□□□□□ -2.13
SPF1YEL031W YCL048W-AQ2V2Q2 79 aa1.78□□□□□ -2.13
SPF1YEL031W YGR121W-AQ3E816 71 aa1.78□□□□□ -2.13
SPF1YEL031W FYV5P25585 152 aa1.77□□□□□ -2.13
SPF1YEL031W YOL085CQ99345 113 aa1.77□□□□□ -2.13
SPF1YEL031W YOR034C-AQ3E735 80 aa1.77□□□□□ -2.13
SPF1YEL031W HHF1P02309 103 aaKnown RBP1.77□□□□□ -2.13
SPF1YEL031W YIL102CP40488 101 aa1.77□□□□□ -2.13
SPF1YEL031W YMR122CQ03879 124 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms