RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C PAU16P35994 123 aa1.71□□□□□ -2.13
SSN2YDR443C LSM2P38203 95 aaKnown RBP1.71□□□□□ -2.13
SSN2YDR443C PAU15P40585 124 aa1.71□□□□□ -2.13
SSN2YDR443C ICS3P47034 131 aa1.71□□□□□ -2.14
SSN2YDR443C CYT2Q00873 224 aa1.71□□□□□ -2.14
SSN2YDR443C SUS1Q6WNK7 96 aa1.71□□□□□ -2.14
SSN2YDR443C FAB1P34756 2278 aa1.71□□□□□ -2.14
SSN2YDR443C POR2P40478 281 aa1.71□□□□□ -2.14
SSN2YDR443C SNN1P48232 102 aa1.71□□□□□ -2.14
SSN2YDR443C YLR194CQ05777 254 aa1.71□□□□□ -2.14
SSN2YDR443C YMR030W-AQ3E760 96 aa1.71□□□□□ -2.14
SSN2YDR443C YOR032W-AQ8TGS1 66 aa1.71□□□□□ -2.14
SSN2YDR443C PAI3P01094 68 aa1.71□□□□□ -2.14
SSN2YDR443C YGL149WP53116 101 aa1.71□□□□□ -2.14
SSN2YDR443C POP3P53833 195 aaPredicted RBP1.71□□□□□ -2.14
SSN2YDR443C MRPS9P38120 278 aa1.7□□□□□ -2.14
SSN2YDR443C YHR022CP38763 256 aa1.7□□□□□ -2.14
SSN2YDR443C DAD4P69851 72 aa1.7□□□□□ -2.14
SSN2YDR443C RPL26AP05743 127 aaKnown RBP1.69□□□□□ -2.14
SSN2YDR443C PAU5P43575 122 aa1.69□□□□□ -2.14
SSN2YDR443C RPL26BP53221 127 aaKnown RBP1.69□□□□□ -2.14
SSN2YDR443C ATG8P38182 117 aaRIP-Chip data1.69□□□□□ -2.14not detected
SSN2YDR443C GCV3P39726 170 aaPredicted RBP1.69□□□□□ -2.14
SSN2YDR443C LST8P41318 303 aa1.69□□□□□ -2.14
SSN2YDR443C YOL118CQ08259 102 aa1.69□□□□□ -2.14
SSN2YDR443C YBR056W-AI2HB52 66 aa1.69□□□□□ -2.14
SSN2YDR443C RPL36BO14455 100 aaKnown RBP1.69□□□□□ -2.14
SSN2YDR443C RPL36AP05745 100 aaPredicted RBP1.69□□□□□ -2.14
SSN2YDR443C ROX3P25046 220 aa1.68□□□□□ -2.14
SSN2YDR443C IRA2P19158 3079 aa1.68□□□□□ -2.14
SSN2YDR443C MRPL38P35996 138 aaPredicted RBP1.67□□□□□ -2.14
SSN2YDR443C YDR381C-AQ3E6R5 114 aa1.67□□□□□ -2.14
SSN2YDR443C MIC27P50945 234 aa1.67□□□□□ -2.14
SSN2YDR443C YHR007C-AQ07074 71 aa1.67□□□□□ -2.14
SSN2YDR443C CYR1P08678 2026 aaKnown RBP1.66□□□□□ -2.14
SSN2YDR443C SED1Q01589 338 aa1.66□□□□□ -2.14
SSN2YDR443C YOL131WQ08270 108 aa1.66□□□□□ -2.14
SSN2YDR443C PFY1P07274 126 aa1.66□□□□□ -2.14
SSN2YDR443C YHR214C-DP0CX93 97 aa1.66□□□□□ -2.14
SSN2YDR443C TEL1P38110 2787 aa1.65□□□□□ -2.14
SSN2YDR443C RPS22AP0C0W1 130 aaKnown RBP1.65□□□□□ -2.14
SSN2YDR443C SSS1P35179 80 aa1.65□□□□□ -2.14
SSN2YDR443C YOR343CQ12484 108 aa1.65□□□□□ -2.14
SSN2YDR443C CCW14O13547 238 aa1.65□□□□□ -2.15
SSN2YDR443C YGL014C-AP0C5N1 53 aa1.65□□□□□ -2.15
SSN2YDR443C YDR210WQ03482 75 aa1.65□□□□□ -2.15
SSN2YDR443C YCL048W-AQ2V2Q2 79 aa1.65□□□□□ -2.15
SSN2YDR443C YPL038W-AQ3E7B4 63 aa1.65□□□□□ -2.15
SSN2YDR443C BRR2P32639 2163 aaKnown RBP1.65□□□□□ -2.15
SSN2YDR443C PAU23Q07987 124 aa1.64□□□□□ -2.15
SSN2YDR443C PAU17Q12370 124 aa1.64□□□□□ -2.15
SSN2YDR443C YPR145C-AQ2V2P0 78 aa1.64□□□□□ -2.15
SSN2YDR443C YNL198CP40166 100 aa1.64□□□□□ -2.15
SSN2YDR443C AGA2P32781 87 aa1.64□□□□□ -2.15
SSN2YDR443C YBR292CP38357 123 aa1.63□□□□□ -2.15
SSN2YDR443C HPA2Q06592 156 aa1.63□□□□□ -2.15
SSN2YDR443C YPR096CO13587 100 aa1.63□□□□□ -2.15
SSN2YDR443C AIM4P38305 123 aaPredicted RBP1.63□□□□□ -2.15
SSN2YDR443C COX12Q01519 83 aa1.63□□□□□ -2.15
SSN2YDR443C YFL041W-AQ3E817 63 aa1.63□□□□□ -2.15
SSN2YDR443C NHP2P32495 156 aaPredicted RBP1.63□□□□□ -2.15
SSN2YDR443C BEM2P39960 2167 aaKnown RBP1.62□□□□□ -2.15
SSN2YDR443C MRP17P28778 131 aa1.62□□□□□ -2.15
SSN2YDR443C YGR121W-AQ3E816 71 aa1.62□□□□□ -2.15
SSN2YDR443C TAR1Q8TGM6 124 aa1.62□□□□□ -2.15
SSN2YDR443C VPS55P47111 140 aa1.62□□□□□ -2.15
SSN2YDR443C YMR122CQ03879 124 aa1.62□□□□□ -2.15
SSN2YDR443C VAM10Q08474 114 aa1.62□□□□□ -2.15
SSN2YDR443C YLR285C-AQ3E771 56 aa1.62□□□□□ -2.15
SSN2YDR443C RPS22BQ3E7Y3 130 aaKnown RBP1.62□□□□□ -2.15
SSN2YDR443C RPS27AP35997 82 aaKnown RBP1.62□□□□□ -2.15
SSN2YDR443C RPS27BP38711 82 aa1.62□□□□□ -2.15
SSN2YDR443C YAL065CO13511 128 aa1.61□□□□□ -2.15
SSN2YDR443C RPL33AP05744 107 aaKnown RBP1.61□□□□□ -2.15
SSN2YDR443C YCL042WP25572 119 aa1.61□□□□□ -2.15
SSN2YDR443C ATX1P38636 73 aa1.61□□□□□ -2.15
SSN2YDR443C YEL008WP40001 126 aa1.61□□□□□ -2.15
SSN2YDR443C YIL163CP40448 117 aa1.61□□□□□ -2.15
SSN2YDR443C LSM6Q06406 86 aaKnown RBP1.61□□□□□ -2.15
SSN2YDR443C YOR314WQ12506 109 aa1.61□□□□□ -2.15
SSN2YDR443C YCR095W-AQ3E787 52 aa1.61□□□□□ -2.15
SSN2YDR443C SLH1P53327 1967 aaKnown RBP1.61□□□□□ -2.15
SSN2YDR443C YBR219CP38317 127 aa1.61□□□□□ -2.15
SSN2YDR443C MRX7P53869 86 aa1.61□□□□□ -2.15
SSN2YDR443C YER188C-AP0C0V2 99 aa1.6□□□□□ -2.15
SSN2YDR443C HMRA2P0CY13 119 aa1.6□□□□□ -2.15
SSN2YDR443C YNR034W-AQ3E841 98 aa1.6□□□□□ -2.15
SSN2YDR443C DSE2P38844 325 aa1.6□□□□□ -2.15
SSN2YDR443C MRPS12P53732 153 aa1.6□□□□□ -2.15
SSN2YDR443C ACC1Q00955 2233 aaKnown RBP1.6□□□□□ -2.15
SSN2YDR443C NUM1Q00402 2748 aa1.6□□□□□ -2.15
SSN2YDR443C IRC21Q04772 201 aa1.6□□□□□ -2.15
SSN2YDR443C YLR162WQ06235 118 aa1.59□□□□□ -2.15
SSN2YDR443C VMA9Q3E7B6 73 aa1.59□□□□□ -2.15
SSN2YDR443C YIL134C-AQ45U18 67 aa1.59□□□□□ -2.15
SSN2YDR443C CDC39P25655 2108 aaKnown RBP1.59□□□□□ -2.16
SSN2YDR443C YSF3P0C074 85 aaPredicted RBP1.59□□□□□ -2.16
SSN2YDR443C SPC1P46965 94 aa1.59□□□□□ -2.16
SSN2YDR443C CCW12Q12127 133 aa1.58□□□□□ -2.16
SSN2YDR443C YDR246W-AQ3E763 66 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms