RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A YCR085WP25650 117 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A YBR292CP38357 123 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A COX19Q3E731 98 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A YNL042W-BQ3E7Z2 85 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A RPA190P10964 1664 aaKnown RBP0.44□□□□□ -2.34
YDR261W-AYDR261W-A YRF1-1P0CX20 1796 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A YRF1-5P0CX21 1796 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A YRF1-8P0CX22 1796 aa0.44□□□□□ -2.34
YDR261W-AYDR261W-A URB1P34241 1764 aaKnown RBP0.44□□□□□ -2.34
YDR261W-AYDR261W-A SWR1Q05471 1514 aa0.43□□□□□ -2.34
YDR261W-AYDR261W-A GDB1Q06625 1536 aa0.43□□□□□ -2.34
YDR261W-AYDR261W-A YAL065CO13511 128 aa0.43□□□□□ -2.34
YDR261W-AYDR261W-A YNL198CP40166 100 aa0.43□□□□□ -2.34
YDR261W-AYDR261W-A POC4Q12245 148 aaPredicted RBP0.43□□□□□ -2.34
YDR261W-AYDR261W-A YOR343CQ12484 108 aa0.43□□□□□ -2.34
YDR261W-AYDR261W-A NOP10Q6Q547 58 aaPredicted RBP0.43□□□□□ -2.34
YDR261W-AYDR261W-A LTE1P07866 1435 aa0.43□□□□□ -2.34
YDR261W-AYDR261W-A POL1P13382 1468 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A TY4B-HP0C2J7 1802 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A TOM6P33448 61 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A RPL38P49167 78 aaKnown RBP0.42□□□□□ -2.34
YDR261W-AYDR261W-A ATP18P81450 59 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A SGF11Q03067 99 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A YIL156W-BQ2V2P4 73 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A YDR381C-AQ3E6R5 114 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A YMR175W-AQ3E766 64 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A SDH6Q3E785 79 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A YMR122W-AQ3E842 84 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A YIL134C-AQ45U18 67 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A SEC16P48415 2195 aaKnown RBP0.42□□□□□ -2.34
YDR261W-AYDR261W-A PDR10P51533 1564 aa0.42□□□□□ -2.34
YDR261W-AYDR261W-A YHR213W-AQ8TGT4 77 aa0.41□□□□□ -2.34
YDR261W-AYDR261W-A BRR2P32639 2163 aaKnown RBP0.41□□□□□ -2.34
YDR261W-AYDR261W-A YSP2Q06681 1438 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A PAI3P01094 68 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A COX7P10174 60 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A TIM12P32830 109 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A YOR314WQ12506 109 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A YKL018C-AQ3E7A7 99 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A YPR108W-AQ3E7B3 70 aa0.4□□□□□ -2.34
YDR261W-AYDR261W-A SNF2P22082 1703 aa0.4□□□□□ -2.35
YDR261W-AYDR261W-A ESC1Q03661 1658 aaKnown RBP0.4□□□□□ -2.35
YDR261W-AYDR261W-A YFR009W-AP0C5M9 85 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A QCR9P22289 66 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A ATX1P38636 73 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A SWM2P40342 146 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A YNL190WP53872 204 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A YLR146W-AQ2V2P1 62 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A YKL065W-AQ2V2P2 73 aa0.39□□□□□ -2.35
YDR261W-AYDR261W-A URA2P07259 2214 aaKnown RBP0.39□□□□□ -2.35
YDR261W-AYDR261W-A FAS2P19097 1887 aaKnown RBP0.38□□□□□ -2.35
YDR261W-AYDR261W-A MLP1Q02455 1875 aaKnown RBP0.38□□□□□ -2.35
YDR261W-AYDR261W-A YDL022C-AP0C5L6 82 aa0.38□□□□□ -2.35
YDR261W-AYDR261W-A SSS1P35179 80 aa0.38□□□□□ -2.35
YDR261W-AYDR261W-A PAU7P39545 55 aa0.38□□□□□ -2.35
YDR261W-AYDR261W-A YDR119W-AQ2V2P9 66 aa0.38□□□□□ -2.35
YDR261W-AYDR261W-A YOL097W-AQ3E7Y9 61 aa0.38□□□□□ -2.35
YDR261W-AYDR261W-A YOR032W-AQ8TGS1 66 aa0.38□□□□□ -2.35
YDR261W-AYDR261W-A BPT1P14772 1559 aa0.37□□□□□ -2.35
YDR261W-AYDR261W-A NTE1Q04958 1679 aa0.37□□□□□ -2.35
YDR261W-AYDR261W-A ECM29P38737 1868 aa0.37□□□□□ -2.35
YDR261W-AYDR261W-A POL2P21951 2222 aaKnown RBP0.37□□□□□ -2.35
YDR261W-AYDR261W-A TY1B-BLQ12490 1755 aa0.37□□□□□ -2.35
YDR261W-AYDR261W-A YBR032WP38223 100 aa0.37□□□□□ -2.35
YDR261W-AYDR261W-A YGR121W-AQ3E816 71 aa0.37□□□□□ -2.35
YDR261W-AYDR261W-A SIN3P22579 1536 aa0.36□□□□□ -2.35
YDR261W-AYDR261W-A YRF1-2P40105 1681 aa0.36□□□□□ -2.35
YDR261W-AYDR261W-A MMS22Q06164 1454 aa0.36□□□□□ -2.35
YDR261W-AYDR261W-A ATP17Q06405 101 aa0.36□□□□□ -2.35
YDR261W-AYDR261W-A YOL131WQ08270 108 aa0.36□□□□□ -2.35
YDR261W-AYDR261W-A YGR035W-AQ45U48 73 aa0.36□□□□□ -2.35
YDR261W-AYDR261W-A RIM15P43565 1770 aa0.35□□□□□ -2.35
YDR261W-AYDR261W-A BLM10P43583 2143 aa0.35□□□□□ -2.35
YDR261W-AYDR261W-A MOT1P32333 1867 aa0.35□□□□□ -2.35
YDR261W-AYDR261W-A YBR016WP38216 128 aa0.35□□□□□ -2.35
YDR261W-AYDR261W-A RPS29BP41058 56 aaKnown RBP0.35□□□□□ -2.35
YDR261W-AYDR261W-A ERI1P62651 68 aaKnown RBP0.35□□□□□ -2.35
YDR261W-AYDR261W-A YFL041W-AQ3E817 63 aa0.35□□□□□ -2.35
YDR261W-AYDR261W-A STT4P37297 1900 aa0.34□□□□□ -2.35
YDR261W-AYDR261W-A UFD4P33202 1483 aa0.34□□□□□ -2.35
YDR261W-AYDR261W-A TY1B-LR3P0C2I6 1755 aaKnown RBP0.34□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-PR3P0C2J1 1755 aaKnown RBP0.34□□□□□ -2.36
YDR261W-AYDR261W-A UTP10P42945 1769 aaKnown RBP0.34□□□□□ -2.36
YDR261W-AYDR261W-A YBL039W-BP0C268 59 aa0.34□□□□□ -2.36
YDR261W-AYDR261W-A HUB1Q6Q546 73 aa0.34□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-PR2P0C2J0 1756 aa0.33□□□□□ -2.36
YDR261W-AYDR261W-A DNF3Q12674 1656 aa0.33□□□□□ -2.36
YDR261W-AYDR261W-A YSY6P38374 65 aa0.33□□□□□ -2.36
YDR261W-AYDR261W-A SIP18P50263 79 aa0.33□□□□□ -2.36
YDR261W-AYDR261W-A EDC1P53080 175 aaPredicted RBP0.33□□□□□ -2.36
YDR261W-AYDR261W-A OLI1P61829 76 aa0.33□□□□□ -2.36
YDR261W-AYDR261W-A YBR200W-AQ3E755 54 aa0.33□□□□□ -2.36
YDR261W-AYDR261W-A NUP159P40477 1460 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A SMC4Q12267 1418 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-CP25384 1770 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-BRQ12193 1756 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-DR1Q12472 1770 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A RPS30AP0CX33 63 aaKnown RBP0.32□□□□□ -2.36
YDR261W-AYDR261W-A RPS30BP0CX34 63 aaKnown RBP0.32□□□□□ -2.36
YDR261W-AYDR261W-A SPI1P40092 148 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms