RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YBR090CP38253 122 aa-0.73□□□□□ -2.53
SNU56YDR240C ECM12O13529 151 aa-0.73□□□□□ -2.53
SNU56YDR240C TOM6P33448 61 aa-0.73□□□□□ -2.53
SNU56YDR240C YMR090WQ04304 227 aaKnown RBP-0.73□□□□□ -2.53
SNU56YDR240C YOR289WQ12012 251 aaPredicted RBP-0.73□□□□□ -2.53
SNU56YDR240C YHL005CP38752 130 aa-0.74□□□□□ -2.53
SNU56YDR240C YMR122W-AQ3E842 84 aa-0.74□□□□□ -2.53
SNU56YDR240C LHP1P33399 275 aaKnown RBP-0.75□□□□□ -2.53
SNU56YDR240C RGI1P40043 161 aaPredicted RBP-0.75□□□□□ -2.53
SNU56YDR240C SDH6Q3E785 79 aa-0.75□□□□□ -2.53
SNU56YDR240C RRT15Q3E811 62 aa-0.75□□□□□ -2.53
SNU56YDR240C TOR1P35169 2470 aa-0.75□□□□□ -2.53
SNU56YDR240C YOR304C-AO14468 76 aa-0.76□□□□□ -2.53
SNU56YDR240C HMRA1P0CY11 126 aa-0.76□□□□□ -2.53
SNU56YDR240C KSH1Q8TGJ3 72 aa-0.76□□□□□ -2.53
SNU56YDR240C TY1B-PR2P0C2J0 1756 aa-0.76□□□□□ -2.53
SNU56YDR240C YAL065CO13511 128 aa-0.77□□□□□ -2.53
SNU56YDR240C ATP18P81450 59 aa-0.77□□□□□ -2.53
SNU56YDR240C EMC5P40540 141 aa-0.78□□□□□ -2.53
SNU56YDR240C BSC4P53841 131 aa-0.78□□□□□ -2.53
SNU56YDR240C YHR214C-DP0CX93 97 aa-0.79□□□□□ -2.54
SNU56YDR240C EDC1P53080 175 aaPredicted RBP-0.79□□□□□ -2.54
SNU56YDR240C YMR001C-AQ8TGS9 76 aa-0.79□□□□□ -2.54
SNU56YDR240C MMS1Q06211 1407 aa-0.79□□□□□ -2.54
SNU56YDR240C GEA1P47102 1408 aaPredicted RBP-0.8□□□□□ -2.54
SNU56YDR240C TY1B-DR6P0C2I3 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C TY1B-LR2P0C2I5 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C TY1B-JR2P47100 1755 aaKnown RBP-0.81□□□□□ -2.54
SNU56YDR240C TY1B-MR1Q04214 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C TY1B-MR2Q04670 1755 aaKnown RBP-0.81□□□□□ -2.54
SNU56YDR240C TY1B-NL1Q12112 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C TY1B-GR1Q12141 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C TY1B-GR3Q12316 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C TY1B-PLQ12414 1755 aaKnown RBP-0.81□□□□□ -2.54
SNU56YDR240C TY1B-ORQ92393 1755 aa-0.81□□□□□ -2.54
SNU56YDR240C BPH1P25356 2167 aa-0.81□□□□□ -2.54
SNU56YDR240C TSC11P40061 1430 aa-0.81□□□□□ -2.54
SNU56YDR240C SNU13P39990 126 aaKnown RBP-0.81□□□□□ -2.54
SNU56YDR240C YPR108W-AQ3E7B3 70 aa-0.81□□□□□ -2.54
SNU56YDR240C TEL1P38110 2787 aa-0.82□□□□□ -2.54
SNU56YDR240C YPR117WQ06116 2489 aa-0.82□□□□□ -2.54
SNU56YDR240C PDR11P40550 1411 aa-0.82□□□□□ -2.54
SNU56YDR240C YCR085WP25650 117 aa-0.82□□□□□ -2.54
SNU56YDR240C RPS12P48589 143 aaKnown RBP-0.82□□□□□ -2.54
SNU56YDR240C POL1P13382 1468 aa-0.82□□□□□ -2.54
SNU56YDR240C YBR032WP38223 100 aa-0.83□□□□□ -2.54
SNU56YDR240C FPR2P32472 135 aa-0.84□□□□□ -2.54
SNU56YDR240C NHP2P32495 156 aaPredicted RBP-0.84□□□□□ -2.54
SNU56YDR240C PAU23Q07987 124 aa-0.84□□□□□ -2.54
SNU56YDR240C PAU17Q12370 124 aa-0.84□□□□□ -2.54
SNU56YDR240C FMP27Q06179 2628 aa-0.84□□□□□ -2.54
SNU56YDR240C TY2B-LR1P0C2J3 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-FP0CX63 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-GR2P0CX64 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-CP25384 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-DR2Q03494 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-DR3Q07791 1770 aaKnown RBP-0.85□□□□□ -2.55
SNU56YDR240C TY2B-OR1Q12113 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-DR1Q12472 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-BQ12491 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C TY2B-OR2Q12501 1770 aa-0.85□□□□□ -2.55
SNU56YDR240C YER137CP40083 148 aaKnown RBP-0.86□□□□□ -2.55
SNU56YDR240C YDR029WQ12111 104 aa-0.86□□□□□ -2.55
SNU56YDR240C STT4P37297 1900 aa-0.86□□□□□ -2.55
SNU56YDR240C TY1B-DR5P0C2I2 1755 aa-0.86□□□□□ -2.55
SNU56YDR240C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.86□□□□□ -2.55
SNU56YDR240C TY1B-ER2Q03619 1755 aa-0.86□□□□□ -2.55
SNU56YDR240C TY1B-DR1Q03855 1755 aa-0.86□□□□□ -2.55
SNU56YDR240C TY1B-ML1Q04711 1755 aaKnown RBP-0.86□□□□□ -2.55
SNU56YDR240C TY1B-LR1Q12088 1755 aaKnown RBP-0.86□□□□□ -2.55
SNU56YDR240C TY1B-GR2Q12269 1755 aa-0.86□□□□□ -2.55
SNU56YDR240C REV3P14284 1504 aa-0.87□□□□□ -2.55
SNU56YDR240C RPA190P10964 1664 aaKnown RBP-0.87□□□□□ -2.55
SNU56YDR240C TY1B-JR1P47098 1755 aa-0.87□□□□□ -2.55
SNU56YDR240C TY1B-ML2Q03434 1755 aaKnown RBP-0.87□□□□□ -2.55
SNU56YDR240C TY1B-ER1Q03612 1755 aa-0.87□□□□□ -2.55
SNU56YDR240C TY1B-OLQ12273 1755 aa-0.87□□□□□ -2.55
SNU56YDR240C TY1B-DR3Q99231 1755 aa-0.87□□□□□ -2.55
SNU56YDR240C MSL1P40567 111 aaPredicted RBP-0.87□□□□□ -2.55
SNU56YDR240C YDR042CQ03205 200 aa-0.87□□□□□ -2.55
SNU56YDR240C GEA2P39993 1459 aaKnown RBP-0.87□□□□□ -2.55
SNU56YDR240C TOR2P32600 2474 aaKnown RBP-0.88□□□□□ -2.55
SNU56YDR240C ECM29P38737 1868 aa-0.88□□□□□ -2.55
SNU56YDR240C YDR182W-AQ3E796 67 aa-0.88□□□□□ -2.55
SNU56YDR240C NOP10Q6Q547 58 aaPredicted RBP-0.88□□□□□ -2.55
SNU56YDR240C DYN1P36022 4092 aa-0.88□□□□□ -2.55
SNU56YDR240C FYV7Q12247 151 aa-0.89□□□□□ -2.55
SNU56YDR240C YOL097W-AQ3E7Y9 61 aa-0.89□□□□□ -2.55
SNU56YDR240C MHF2Q3E829 80 aa-0.89□□□□□ -2.55
SNU56YDR240C YIL156W-BQ2V2P4 73 aa-0.9□□□□□ -2.55
SNU56YDR240C XRN1P22147 1528 aaKnown RBP-0.9□□□□□ -2.55
SNU56YDR240C GDB1Q06625 1536 aa-0.9□□□□□ -2.55
SNU56YDR240C SCP1Q08873 200 aa-0.91□□□□□ -2.55
SNU56YDR240C YKL018C-AQ3E7A7 99 aa-0.91□□□□□ -2.55
SNU56YDR240C YKL068W-AQ3E826 78 aa-0.91□□□□□ -2.55
SNU56YDR240C MDN1Q12019 4910 aaKnown RBP-0.91□□□□□ -2.56
SNU56YDR240C YOR008C-AQ3E7B9 74 aa-0.92□□□□□ -2.56
SNU56YDR240C SUS1Q6WNK7 96 aa-0.92□□□□□ -2.56
SNU56YDR240C GCN1P33892 2672 aaKnown RBP-0.93□□□□□ -2.56
SNU56YDR240C RPS27AP35997 82 aaKnown RBP-0.93□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms