RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	MYO4	P32492	1471 aa		1.21	□□□□□ -2.22
AIM4	YBR194W	MMS22	Q06164	1454 aa		1.21	□□□□□ -2.22
AIM4	YBR194W	CCW14	O13547	238 aa		1.21	□□□□□ -2.22
AIM4	YBR194W	EMC5	P40540	141 aa		1.21	□□□□□ -2.22
AIM4	YBR194W	YOR289W	Q12012	251 aa	Predicted RBP	1.21	□□□□□ -2.22
AIM4	YBR194W	YPL038W-A	Q3E7B4	63 aa		1.21	□□□□□ -2.22
AIM4	YBR194W	CHC1	P22137	1653 aa	Known RBP	1.2	□□□□□ -2.22
AIM4	YBR194W	YHL005C	P38752	130 aa		1.2	□□□□□ -2.22
AIM4	YBR194W	MSL1	P40567	111 aa	Predicted RBP	1.2	□□□□□ -2.22
AIM4	YBR194W	PAU5	P43575	122 aa		1.2	□□□□□ -2.22
AIM4	YBR194W	COX12	Q01519	83 aa		1.2	□□□□□ -2.22
AIM4	YBR194W	RSF2	P46974	1380 aa		1.2	□□□□□ -2.22
AIM4	YBR194W	NUP170	P38181	1502 aa		1.2	□□□□□ -2.22
AIM4	YBR194W	GDB1	Q06625	1536 aa		1.2	□□□□□ -2.22
AIM4	YBR194W	HMRA1	P0CY11	126 aa		1.19	□□□□□ -2.22
AIM4	YBR194W	NUP159	P40477	1460 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	ARO1	P08566	1588 aa	Known RBP	1.18	□□□□□ -2.22
AIM4	YBR194W	ROX3	P25046	220 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	YIL086C	P40503	102 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	PDR12	Q02785	1511 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	BUD3	P25558	1636 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	YOR093C	Q12275	1648 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	DNF2	Q12675	1612 aa		1.18	□□□□□ -2.22
AIM4	YBR194W	VMR1	P38735	1592 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	PDR10	P51533	1564 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	SRB8	P25648	1427 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	MRP17	P28778	131 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	SHU1	P38751	150 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	SUS1	Q6WNK7	96 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	YCL001W-B	Q96VH2	84 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	VPS15	P22219	1454 aa		1.17	□□□□□ -2.22
AIM4	YBR194W	GCV3	P39726	170 aa	Predicted RBP	1.16	□□□□□ -2.22
AIM4	YBR194W	MRX7	P53869	86 aa		1.16	□□□□□ -2.22
AIM4	YBR194W	LAA1	P39526	2014 aa		1.16	□□□□□ -2.22
AIM4	YBR194W	YLR157W-E	P0CF00	54 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	MPC2	P38857	129 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	YHR173C	P38864	112 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	YDR210W	Q03482	75 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	YDR029W	Q12111	104 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	COX19	Q3E731	98 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	YLR307C-A	Q3E825	87 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	GCN2	P15442	1659 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	DNF3	Q12674	1656 aa		1.15	□□□□□ -2.23
AIM4	YBR194W	SEC7	P11075	2009 aa	Known RBP	1.15	□□□□□ -2.23
AIM4	YBR194W	NUP192	P47054	1683 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	YLR255C	O13574	117 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	PAU6	P0CE90	120 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	PAU18	P0CE91	120 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	YBL071C	P38185	102 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	SNU13	P39990	126 aa	Known RBP	1.14	□□□□□ -2.23
AIM4	YBR194W	PAU20	Q08322	120 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	YBR072C-A	Q3E794	53 aa		1.14	□□□□□ -2.23
AIM4	YBR194W	USO1	P25386	1790 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	NUP188	P52593	1655 aa	Known RBP	1.13	□□□□□ -2.23
AIM4	YBR194W	IQG1	Q12280	1495 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	TY4B-H	P0C2J7	1802 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	RRT15	Q3E811	62 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	YCR075W-A	Q3E830	75 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	PDR5	P33302	1511 aa	Known RBP	1.13	□□□□□ -2.23
AIM4	YBR194W	LTE1	P07866	1435 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	YSP2	Q06681	1438 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	IML1	P47170	1584 aa		1.13	□□□□□ -2.23
AIM4	YBR194W	TY1B-NL2	Q99337	1749 aa	Known RBP	1.12	□□□□□ -2.23
AIM4	YBR194W	PAU1	P0CE88	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	PAU14	P0CE89	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	PAU8	P0CE92	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	PAU11	P0CE93	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	PAU13	P38725	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	RSM18	P40033	138 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	AIM19	P40502	157 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	PAU10	Q03050	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	PAU9	Q3E770	120 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	MHF2	Q3E829	80 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	MYO1	P08964	1928 aa		1.12	□□□□□ -2.23
AIM4	YBR194W	YBR292C	P38357	123 aa		1.11	□□□□□ -2.23
AIM4	YBR194W	SPC1	P46965	94 aa		1.11	□□□□□ -2.23
AIM4	YBR194W	NHP10	Q03435	203 aa		1.11	□□□□□ -2.23
AIM4	YBR194W	ICY1	Q04329	127 aa		1.11	□□□□□ -2.23
AIM4	YBR194W	YNR034W-A	Q3E841	98 aa		1.11	□□□□□ -2.23
AIM4	YBR194W	SEC16	P48415	2195 aa	Known RBP	1.1	□□□□□ -2.23
AIM4	YBR194W	MMS1	Q06211	1407 aa		1.1	□□□□□ -2.23
AIM4	YBR194W	PAU4	P53427	120 aa		1.1	□□□□□ -2.23
AIM4	YBR194W	ECM12	O13529	151 aa		1.09	□□□□□ -2.23
AIM4	YBR194W	YDR010C	Q12426	110 aa		1.09	□□□□□ -2.23
AIM4	YBR194W	AUA1	P32450	94 aa		1.08	□□□□□ -2.24
AIM4	YBR194W	YDR042C	Q03205	200 aa		1.08	□□□□□ -2.24
AIM4	YBR194W	HAP1	P0CE41	1502 aa		1.08	□□□□□ -2.24
AIM4	YBR194W	RRP5	Q05022	1729 aa	Known RBP	1.07	□□□□□ -2.24
AIM4	YBR194W	MRPL38	P35996	138 aa	Predicted RBP	1.07	□□□□□ -2.24
AIM4	YBR194W	YRF1-2	P40105	1681 aa		1.07	□□□□□ -2.24
AIM4	YBR194W	FKS3	Q04952	1785 aa		1.06	□□□□□ -2.24
AIM4	YBR194W	RPS11A	P0CX47	156 aa	Known RBP	1.05	□□□□□ -2.24
AIM4	YBR194W	RPS11B	P0CX48	156 aa	Known RBP	1.05	□□□□□ -2.24
AIM4	YBR194W	SNF2	P22082	1703 aa		1.05	□□□□□ -2.24
AIM4	YBR194W	BCK1	Q01389	1478 aa		1.05	□□□□□ -2.24
AIM4	YBR194W	MLP1	Q02455	1875 aa	Known RBP	1.04	□□□□□ -2.24
AIM4	YBR194W	BSC4	P53841	131 aa		1.04	□□□□□ -2.24
AIM4	YBR194W	YMR082C	Q04276	118 aa		1.04	□□□□□ -2.24
AIM4	YBR194W	YGL194C-A	Q2V2P6	80 aa		1.04	□□□□□ -2.24
AIM4	YBR194W	APC1	P53886	1748 aa		1.03	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 180.5 ms