RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C SWR1Q05471 1514 aa1.22□□□□□ -2.21
SHE3YBR130C YRF1-2P40105 1681 aa1.21□□□□□ -2.22
SHE3YBR130C YMR082CQ04276 118 aa1.21□□□□□ -2.22
SHE3YBR130C SKI3P17883 1432 aaKnown RBP1.21□□□□□ -2.22
SHE3YBR130C GDB1Q06625 1536 aa1.2□□□□□ -2.22
SHE3YBR130C SNF2P22082 1703 aa1.2□□□□□ -2.22
SHE3YBR130C TY1B-BLQ12490 1755 aa1.19□□□□□ -2.22
SHE3YBR130C YNL042W-BQ3E7Z2 85 aa1.19□□□□□ -2.22
SHE3YBR130C RPA12P32529 125 aaKnown RBP1.18□□□□□ -2.22
SHE3YBR130C SCP1Q08873 200 aa1.18□□□□□ -2.22
SHE3YBR130C COX7P10174 60 aa1.17□□□□□ -2.22
SHE3YBR130C NHP2P32495 156 aaPredicted RBP1.17□□□□□ -2.22
SHE3YBR130C RPL38P49167 78 aaKnown RBP1.17□□□□□ -2.22
SHE3YBR130C YNL190WP53872 204 aa1.16□□□□□ -2.22
SHE3YBR130C YNL198CP40166 100 aa1.15□□□□□ -2.23
SHE3YBR130C POL1P13382 1468 aa1.15□□□□□ -2.23
SHE3YBR130C RPC10P40422 70 aa1.14□□□□□ -2.23
SHE3YBR130C Q0032Q9ZZX7 96 aa1.14□□□□□ -2.23
SHE3YBR130C LTE1P07866 1435 aa1.14□□□□□ -2.23
SHE3YBR130C YKL068W-AQ3E826 78 aa1.13□□□□□ -2.23
SHE3YBR130C ATX1P38636 73 aa1.12□□□□□ -2.23
SHE3YBR130C YGL194C-AQ2V2P6 80 aa1.12□□□□□ -2.23
SHE3YBR130C YHR214C-DP0CX93 97 aa1.1□□□□□ -2.23
SHE3YBR130C TOM6P33448 61 aa1.1□□□□□ -2.23
SHE3YBR130C YBR201C-AQ2V2Q3 67 aa1.1□□□□□ -2.23
SHE3YBR130C YOR343CQ12484 108 aa1.09□□□□□ -2.23
SHE3YBR130C YMR175W-AQ3E766 64 aa1.09□□□□□ -2.23
SHE3YBR130C TY1B-BRQ12193 1756 aa1.08□□□□□ -2.24
SHE3YBR130C DNF3Q12674 1656 aa1.08□□□□□ -2.24
SHE3YBR130C FPR2P32472 135 aa1.08□□□□□ -2.24
SHE3YBR130C YAL065CO13511 128 aa1.07□□□□□ -2.24
SHE3YBR130C YJR107C-AP0CT86 78 aa1.07□□□□□ -2.24
SHE3YBR130C TAO3P40468 2376 aa1.06□□□□□ -2.24
SHE3YBR130C YMR122W-AQ3E842 84 aa1.06□□□□□ -2.24
SHE3YBR130C ESC1Q03661 1658 aaKnown RBP1.04□□□□□ -2.24
SHE3YBR130C ATP18P81450 59 aa1.03□□□□□ -2.24
SHE3YBR130C PAU23Q07987 124 aa1.03□□□□□ -2.24
SHE3YBR130C PAU17Q12370 124 aa1.03□□□□□ -2.24
SHE3YBR130C YSP2Q06681 1438 aa1.01□□□□□ -2.25
SHE3YBR130C SDH6Q3E785 79 aa1□□□□□ -2.25
SHE3YBR130C MOT1P32333 1867 aa1□□□□□ -2.25
SHE3YBR130C YFR009W-AP0C5M9 85 aa0.99□□□□□ -2.25
SHE3YBR130C YBR016WP38216 128 aa0.99□□□□□ -2.25
SHE3YBR130C YCR085WP25650 117 aa0.98□□□□□ -2.25
SHE3YBR130C YKL065W-AQ2V2P2 73 aa0.98□□□□□ -2.25
SHE3YBR130C YOL097W-AQ3E7Y9 61 aa0.98□□□□□ -2.25
SHE3YBR130C ECM29P38737 1868 aa0.98□□□□□ -2.25
SHE3YBR130C CWP2P43497 92 aa0.97□□□□□ -2.25
SHE3YBR130C YOR105WQ08504 108 aa0.97□□□□□ -2.25
SHE3YBR130C TY1B-PR2P0C2J0 1756 aa0.97□□□□□ -2.25
SHE3YBR130C TY1B-DR6P0C2I3 1755 aa0.96□□□□□ -2.26
SHE3YBR130C TY1B-LR2P0C2I5 1755 aa0.96□□□□□ -2.26
SHE3YBR130C TY1B-PR3P0C2J1 1755 aaKnown RBP0.96□□□□□ -2.26
SHE3YBR130C TY1B-JR2P47100 1755 aaKnown RBP0.96□□□□□ -2.26
SHE3YBR130C TY1B-MR1Q04214 1755 aa0.96□□□□□ -2.26
SHE3YBR130C TY1B-MR2Q04670 1755 aaKnown RBP0.96□□□□□ -2.26
SHE3YBR130C TY1B-NL1Q12112 1755 aa0.96□□□□□ -2.26
SHE3YBR130C TY1B-GR1Q12141 1755 aa0.96□□□□□ -2.26
SHE3YBR130C TY1B-GR3Q12316 1755 aa0.96□□□□□ -2.26
SHE3YBR130C TY1B-PLQ12414 1755 aaKnown RBP0.96□□□□□ -2.26
SHE3YBR130C TY1B-ORQ92393 1755 aa0.96□□□□□ -2.26
SHE3YBR130C NOP10Q6Q547 58 aaPredicted RBP0.96□□□□□ -2.26
SHE3YBR130C YIL134C-AQ45U18 67 aa0.94□□□□□ -2.26
SHE3YBR130C STT4P37297 1900 aa0.91□□□□□ -2.26
SHE3YBR130C TY1B-LR3P0C2I6 1755 aaKnown RBP0.91□□□□□ -2.26
SHE3YBR130C YOR314WQ12506 109 aa0.91□□□□□ -2.26
SHE3YBR130C ESP1Q03018 1630 aa0.9□□□□□ -2.26
SHE3YBR130C YBR032WP38223 100 aa0.9□□□□□ -2.27
SHE3YBR130C POC4Q12245 148 aaPredicted RBP0.9□□□□□ -2.27
SHE3YBR130C YPR108W-AQ3E7B3 70 aa0.9□□□□□ -2.27
SHE3YBR130C MMS22Q06164 1454 aa0.9□□□□□ -2.27
SHE3YBR130C XRN1P22147 1528 aaKnown RBP0.89□□□□□ -2.27
SHE3YBR130C EDC1P53080 175 aaPredicted RBP0.89□□□□□ -2.27
SHE3YBR130C HKR1P41809 1802 aa0.88□□□□□ -2.27
SHE3YBR130C SGF11Q03067 99 aa0.88□□□□□ -2.27
SHE3YBR130C YIL156W-BQ2V2P4 73 aa0.88□□□□□ -2.27
SHE3YBR130C MLP1Q02455 1875 aaKnown RBP0.87□□□□□ -2.27
SHE3YBR130C YDR381C-AQ3E6R5 114 aa0.86□□□□□ -2.27
SHE3YBR130C BPH1P25356 2167 aa0.86□□□□□ -2.27
SHE3YBR130C UTP10P42945 1769 aaKnown RBP0.85□□□□□ -2.27
SHE3YBR130C YPR145C-AQ2V2P0 78 aa0.85□□□□□ -2.27
SHE3YBR130C YGR025WP53216 100 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-DR5P0C2I2 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-PR1P0C2I9 1755 aaKnown RBP0.83□□□□□ -2.28
SHE3YBR130C TY1B-JR1P47098 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-ML2Q03434 1755 aaKnown RBP0.83□□□□□ -2.28
SHE3YBR130C TY1B-ER1Q03612 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-ER2Q03619 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-DR1Q03855 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-ML1Q04711 1755 aaKnown RBP0.83□□□□□ -2.28
SHE3YBR130C TY1B-LR1Q12088 1755 aaKnown RBP0.83□□□□□ -2.28
SHE3YBR130C TY1B-GR2Q12269 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-OLQ12273 1755 aa0.83□□□□□ -2.28
SHE3YBR130C TY1B-DR3Q99231 1755 aa0.83□□□□□ -2.28
SHE3YBR130C SWM2P40342 146 aa0.8□□□□□ -2.28
SHE3YBR130C QCR9P22289 66 aa0.77□□□□□ -2.29
SHE3YBR130C YDL022C-AP0C5L6 82 aa0.74□□□□□ -2.29
SHE3YBR130C YGR121W-AQ3E816 71 aa0.74□□□□□ -2.29
SHE3YBR130C SEN1Q00416 2231 aaKnown RBP0.72□□□□□ -2.29
SHE3YBR130C SIN3P22579 1536 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms