RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W YLR162WQ06235 118 aa2.06□□□□□ -2.08
PHO88YBR106W CMC4Q3E7A9 73 aa2.06□□□□□ -2.08
PHO88YBR106W DYN1P36022 4092 aa2.06□□□□□ -2.08
PHO88YBR106W RPS25BP0C0T4 108 aaKnown RBP2.05□□□□□ -2.08
PHO88YBR106W YJL197C-AP0C5P0 93 aa2.05□□□□□ -2.08
PHO88YBR106W YCL042WP25572 119 aa2.05□□□□□ -2.08
PHO88YBR106W RPA12P32529 125 aaKnown RBP2.05□□□□□ -2.08
PHO88YBR106W RPB7P34087 171 aa2.05□□□□□ -2.08
PHO88YBR106W FIT2Q08906 153 aa2.05□□□□□ -2.08
PHO88YBR106W MHF1Q3E835 90 aa2.05□□□□□ -2.08
PHO88YBR106W OST5Q92316 86 aa2.05□□□□□ -2.08
PHO88YBR106W QCR8P08525 94 aa2.04□□□□□ -2.08
PHO88YBR106W HSP150P32478 413 aa2.04□□□□□ -2.08
PHO88YBR106W YHR138CP38841 114 aaPredicted RBP2.04□□□□□ -2.08
PHO88YBR106W YFL051CP43552 160 aa2.04□□□□□ -2.08
PHO88YBR106W RPL22BP56628 122 aaKnown RBP2.04□□□□□ -2.08
PHO88YBR106W AVO2Q04749 426 aa2.04□□□□□ -2.08
PHO88YBR106W YDL157CQ12082 118 aa2.04□□□□□ -2.08
PHO88YBR106W YDR119W-AQ2V2P9 66 aa2.04□□□□□ -2.08
PHO88YBR106W URA2P07259 2214 aaKnown RBP2.03□□□□□ -2.08
PHO88YBR106W BPH1P25356 2167 aa2.03□□□□□ -2.08
PHO88YBR106W BLM10P43583 2143 aa2.03□□□□□ -2.08
PHO88YBR106W PAU19P0CE85 124 aa2.03□□□□□ -2.08
PHO88YBR106W PAU3P25610 124 aa2.03□□□□□ -2.08
PHO88YBR106W YIL014C-AQ02598 104 aa2.03□□□□□ -2.08
PHO88YBR106W ICY1Q04329 127 aa2.03□□□□□ -2.08
PHO88YBR106W DAD1Q12248 94 aa2.03□□□□□ -2.08
PHO88YBR106W YNL146C-AQ3E7Z1 64 aa2.03□□□□□ -2.08
PHO88YBR106W PAU16P35994 123 aa2.02□□□□□ -2.09
PHO88YBR106W HSP10P38910 106 aa2.02□□□□□ -2.09
PHO88YBR106W PAU15P40585 124 aa2.02□□□□□ -2.09
PHO88YBR106W VMA21P41806 77 aa2.02□□□□□ -2.09
PHO88YBR106W YLR363W-AQ3E747 85 aa2.02□□□□□ -2.09
PHO88YBR106W RPS25AQ3E792 108 aaPredicted RBP2.02□□□□□ -2.09
PHO88YBR106W ENV10Q99382 181 aa2.02□□□□□ -2.09
PHO88YBR106W SLH1P53327 1967 aaKnown RBP2.01□□□□□ -2.09
PHO88YBR106W PAI3P01094 68 aa2.01□□□□□ -2.09
PHO88YBR106W YHL005CP38752 130 aa2.01□□□□□ -2.09
PHO88YBR106W YGL149WP53116 101 aa2.01□□□□□ -2.09
PHO88YBR106W NAT5Q08689 176 aa2.01□□□□□ -2.09
PHO88YBR106W PCC1Q3E833 88 aa2.01□□□□□ -2.09
PHO88YBR106W COX23P38824 151 aa2□□□□□ -2.09
PHO88YBR106W YEL014CP39999 101 aa2□□□□□ -2.09
PHO88YBR106W RSM18P40033 138 aa2□□□□□ -2.09
PHO88YBR106W PAU5P43575 122 aa2□□□□□ -2.09
PHO88YBR106W ICS3P47034 131 aa2□□□□□ -2.09
PHO88YBR106W SNN1P48232 102 aa2□□□□□ -2.09
PHO88YBR106W YLR194CQ05777 254 aa2□□□□□ -2.09
PHO88YBR106W SUS1Q6WNK7 96 aa2□□□□□ -2.09
PHO88YBR106W ATG8P38182 117 aaRIP-Chip data1.99□□□□□ -2.09not detected
PHO88YBR106W GCV3P39726 170 aaPredicted RBP1.99□□□□□ -2.09
PHO88YBR106W IMP2P46972 177 aa1.99□□□□□ -2.09
PHO88YBR106W TOM6P33448 61 aa1.98□□□□□ -2.09
PHO88YBR106W SSS1P35179 80 aa1.98□□□□□ -2.09
PHO88YBR106W YBR027CP38220 110 aa1.98□□□□□ -2.09
PHO88YBR106W SWM2P40342 146 aa1.98□□□□□ -2.09
PHO88YBR106W YOL131WQ08270 108 aa1.98□□□□□ -2.09
PHO88YBR106W RPL22AP05749 121 aaKnown RBP1.97□□□□□ -2.09
PHO88YBR106W RPS22AP0C0W1 130 aaKnown RBP1.97□□□□□ -2.09
PHO88YBR106W ROX3P25046 220 aa1.97□□□□□ -2.09
PHO88YBR106W LST8P41318 303 aa1.96□□□□□ -2.1
PHO88YBR106W YPR145C-AQ2V2P0 78 aa1.96□□□□□ -2.1
PHO88YBR106W MDN1Q12019 4910 aaKnown RBP1.95□□□□□ -2.1
PHO88YBR106W POR2P40478 281 aa1.95□□□□□ -2.1
PHO88YBR106W RPL36BO14455 100 aaKnown RBP1.94□□□□□ -2.1
PHO88YBR106W RPL36AP05745 100 aaPredicted RBP1.94□□□□□ -2.1
PHO88YBR106W YHL037CP38733 133 aa1.94□□□□□ -2.1
PHO88YBR106W YNL198CP40166 100 aa1.94□□□□□ -2.1
PHO88YBR106W MIC27P50945 234 aa1.94□□□□□ -2.1
PHO88YBR106W YOL118CQ08259 102 aa1.94□□□□□ -2.1
PHO88YBR106W YDR381C-AQ3E6R5 114 aa1.94□□□□□ -2.1
PHO88YBR106W NHP2P32495 156 aaPredicted RBP1.93□□□□□ -2.1
PHO88YBR106W MRPL38P35996 138 aaPredicted RBP1.93□□□□□ -2.1
PHO88YBR106W YBR292CP38357 123 aa1.93□□□□□ -2.1
PHO88YBR106W RPS22BQ3E7Y3 130 aaKnown RBP1.93□□□□□ -2.1
PHO88YBR106W YHR214C-DP0CX93 97 aa1.92□□□□□ -2.1
PHO88YBR106W HMRA2P0CY13 119 aa1.92□□□□□ -2.1
PHO88YBR106W AIM4P38305 123 aaPredicted RBP1.92□□□□□ -2.1
PHO88YBR106W YIL086CP40503 102 aa1.92□□□□□ -2.1
PHO88YBR106W PAU23Q07987 124 aa1.92□□□□□ -2.1
PHO88YBR106W PAU17Q12370 124 aa1.92□□□□□ -2.1
PHO88YBR106W YIL134C-AQ45U18 67 aa1.92□□□□□ -2.1
PHO88YBR106W ATX1P38636 73 aa1.91□□□□□ -2.1
PHO88YBR106W HPA2Q06592 156 aa1.91□□□□□ -2.1
PHO88YBR106W COA3Q3E7B2 85 aa1.91□□□□□ -2.1
PHO88YBR106W YGL014C-AP0C5N1 53 aa1.9□□□□□ -2.11
PHO88YBR106W YOR343CQ12484 108 aa1.9□□□□□ -2.11
PHO88YBR106W YLR285C-AQ3E771 56 aa1.9□□□□□ -2.11
PHO88YBR106W YPL038W-AQ3E7B4 63 aa1.9□□□□□ -2.11
PHO88YBR106W YFL041W-AQ3E817 63 aa1.9□□□□□ -2.11
PHO88YBR106W YNR034W-AQ3E841 98 aa1.9□□□□□ -2.11
PHO88YBR106W SPC1P46965 94 aa1.89□□□□□ -2.11
PHO88YBR106W TAR1Q8TGM6 124 aa1.89□□□□□ -2.11
PHO88YBR106W PDX3P38075 228 aaKnown RBP1.88□□□□□ -2.11
PHO88YBR106W YEL008WP40001 126 aa1.88□□□□□ -2.11
PHO88YBR106W SED1Q01589 338 aa1.88□□□□□ -2.11
PHO88YBR106W YDR210WQ03482 75 aa1.88□□□□□ -2.11
PHO88YBR106W LSM6Q06406 86 aaKnown RBP1.88□□□□□ -2.11
PHO88YBR106W VAM10Q08474 114 aa1.88□□□□□ -2.11
PHO88YBR106W YCR095W-AQ3E787 52 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms