RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 PAU3P25610 124 aa-1.56□□□□□ -2.66
snR54snR54 YPL038W-AQ3E7B4 63 aa-1.56□□□□□ -2.66
snR54snR54 CAT8P39113 1433 aa-1.57□□□□□ -2.66
snR54snR54 MRPL38P35996 138 aaPredicted RBP-1.59□□□□□ -2.66
snR54snR54 YIL134C-AQ45U18 67 aa-1.6□□□□□ -2.67
snR54snR54 SSN2P38931 1420 aa-1.62□□□□□ -2.67
snR54snR54 AIM11P87275 137 aa-1.62□□□□□ -2.67
snR54snR54 YLR361C-AQ3E795 98 aa-1.62□□□□□ -2.67
snR54snR54 YHR138CP38841 114 aaPredicted RBP-1.63□□□□□ -2.67
snR54snR54 GTT1P40582 234 aa-1.63□□□□□ -2.67
snR54snR54 YCR099CP25657 155 aa-1.64□□□□□ -2.67
snR54snR54 MRX7P53869 86 aa-1.64□□□□□ -2.67
snR54snR54 COX12Q01519 83 aa-1.64□□□□□ -2.67
snR54snR54 YCR108CQ3E819 63 aa-1.64□□□□□ -2.67
snR54snR54 YLR419WQ06698 1435 aaKnown RBP-1.65□□□□□ -2.67
snR54snR54 PAU15P40585 124 aa-1.65□□□□□ -2.67
snR54snR54 YRF1-1P0CX20 1796 aa-1.67□□□□□ -2.68
snR54snR54 YRF1-5P0CX21 1796 aa-1.67□□□□□ -2.68
snR54snR54 YRF1-8P0CX22 1796 aa-1.67□□□□□ -2.68
snR54snR54 YJR107C-AP0CT86 78 aa-1.67□□□□□ -2.68
snR54snR54 YLR365WQ7LIF2 110 aa-1.67□□□□□ -2.68
snR54snR54 ICY1Q04329 127 aa-1.68□□□□□ -2.68
snR54snR54 PAU16P35994 123 aa-1.69□□□□□ -2.68
snR54snR54 RSM18P40033 138 aa-1.69□□□□□ -2.68
snR54snR54 YBR292CP38357 123 aa-1.7□□□□□ -2.68
snR54snR54 RPB11P38902 120 aa-1.7□□□□□ -2.68
snR54snR54 YLR118CQ12354 227 aa-1.7□□□□□ -2.68
snR54snR54 NTE1Q04958 1679 aa-1.71□□□□□ -2.68
snR54snR54 PMD1P32634 1753 aa-1.71□□□□□ -2.68
snR54snR54 MRP49P32388 137 aa-1.71□□□□□ -2.68
snR54snR54 YAR029WP39549 74 aa-1.71□□□□□ -2.68
snR54snR54 NKP2Q06162 153 aa-1.71□□□□□ -2.68
snR54snR54 YIR021W-AQ3E739 70 aa-1.71□□□□□ -2.68
snR54snR54 HKR1P41809 1802 aa-1.71□□□□□ -2.68
snR54snR54 YGL204CP53089 101 aa-1.73□□□□□ -2.69
snR54snR54 SRB8P25648 1427 aa-1.74□□□□□ -2.69
snR54snR54 TY1B-BRQ12193 1756 aa-1.74□□□□□ -2.69
snR54snR54 BPH1P25356 2167 aa-1.74□□□□□ -2.69
snR54snR54 YLR099W-AQ3E798 87 aa-1.76□□□□□ -2.69
snR54snR54 BUD23P25627 275 aaPredicted RBP-1.77□□□□□ -2.69
snR54snR54 RPL38P49167 78 aaKnown RBP-1.77□□□□□ -2.69
snR54snR54 DYN2Q02647 92 aa-1.77□□□□□ -2.69
snR54snR54 HUR1P45820 110 aa-1.78□□□□□ -2.69
snR54snR54 BPT1P14772 1559 aa-1.79□□□□□ -2.7
snR54snR54 PAU20Q08322 120 aa-1.79□□□□□ -2.7
snR54snR54 YNR034W-AQ3E841 98 aa-1.79□□□□□ -2.7
snR54snR54 BUD4P47136 1447 aa-1.8□□□□□ -2.7
snR54snR54 YDR381C-AQ3E6R5 114 aa-1.81□□□□□ -2.7
snR54snR54 PAU6P0CE90 120 aa-1.82□□□□□ -2.7
snR54snR54 PAU18P0CE91 120 aa-1.82□□□□□ -2.7
snR54snR54 MRP17P28778 131 aa-1.82□□□□□ -2.7
snR54snR54 SRB6P32570 121 aa-1.82□□□□□ -2.7
snR54snR54 YCR095W-AQ3E787 52 aa-1.82□□□□□ -2.7
snR54snR54 SNA2P56508 79 aa-1.83□□□□□ -2.7
snR54snR54 YLR042CQ07990 161 aa-1.83□□□□□ -2.7
snR54snR54 PDX3P38075 228 aaKnown RBP-1.84□□□□□ -2.7
snR54snR54 VMA21P41806 77 aa-1.84□□□□□ -2.7
snR54snR54 TOR1P35169 2470 aa-1.84□□□□□ -2.7
snR54snR54 VMA7P39111 118 aa-1.86□□□□□ -2.71
snR54snR54 RTR2Q12378 196 aa-1.87□□□□□ -2.71
snR54snR54 YDR246W-AQ3E763 66 aa-1.87□□□□□ -2.71
snR54snR54 TY1B-PR2P0C2J0 1756 aa-1.87□□□□□ -2.71
snR54snR54 ROX3P25046 220 aa-1.89□□□□□ -2.71
snR54snR54 DNF3Q12674 1656 aa-1.9□□□□□ -2.71
snR54snR54 MIX14Q04341 121 aa-1.9□□□□□ -2.71
snR54snR54 QCR6P00127 147 aa-1.91□□□□□ -2.72
snR54snR54 COX7P10174 60 aa-1.91□□□□□ -2.72
snR54snR54 YBL071CP38185 102 aa-1.91□□□□□ -2.72
snR54snR54 SWC7Q06707 132 aa-1.91□□□□□ -2.72
snR54snR54 KRE5P22023 1365 aa-1.91□□□□□ -2.72
snR54snR54 AIM19P40502 157 aa-1.92□□□□□ -2.72
snR54snR54 PAU5P43575 122 aa-1.92□□□□□ -2.72
snR54snR54 YGR025WP53216 100 aa-1.92□□□□□ -2.72
snR54snR54 APS2Q00381 147 aa-1.92□□□□□ -2.72
snR54snR54 Q0032Q9ZZX7 96 aa-1.93□□□□□ -2.72
snR54snR54 PAU1P0CE88 120 aa-1.95□□□□□ -2.72
snR54snR54 PAU14P0CE89 120 aa-1.95□□□□□ -2.72
snR54snR54 PAU8P0CE92 120 aa-1.95□□□□□ -2.72
snR54snR54 PAU11P0CE93 120 aa-1.95□□□□□ -2.72
snR54snR54 PAU13P38725 120 aa-1.95□□□□□ -2.72
snR54snR54 PAU10Q03050 120 aa-1.95□□□□□ -2.72
snR54snR54 PAU9Q3E770 120 aa-1.95□□□□□ -2.72
snR54snR54 YNL042W-BQ3E7Z2 85 aa-1.97□□□□□ -2.72
snR54snR54 LYS2P07702 1392 aa-1.98□□□□□ -2.73
snR54snR54 MIC10Q96VH5 97 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-DR6P0C2I3 1755 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-LR2P0C2I5 1755 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-JR2P47100 1755 aaKnown RBP-1.98□□□□□ -2.73
snR54snR54 TY1B-MR1Q04214 1755 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-MR2Q04670 1755 aaKnown RBP-1.98□□□□□ -2.73
snR54snR54 TY1B-NL1Q12112 1755 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-GR1Q12141 1755 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-GR3Q12316 1755 aa-1.98□□□□□ -2.73
snR54snR54 TY1B-PLQ12414 1755 aaKnown RBP-1.98□□□□□ -2.73
snR54snR54 TY1B-ORQ92393 1755 aa-1.98□□□□□ -2.73
snR54snR54 RPS29AP41057 56 aaKnown RBP-2□□□□□ -2.73
snR54snR54 YOS1Q3E834 85 aa-2.01□□□□□ -2.73
snR54snR54 SPC2Q04969 178 aa-2.02□□□□□ -2.73
snR54snR54 PAU4P53427 120 aa-2.04□□□□□ -2.74
snR54snR54 YBR201C-AQ2V2Q3 67 aa-2.04□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms