RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W KIN28P06242 306 aa1.37□□□□□ -2.19
VPS16YPL045W PDX3P38075 228 aaKnown RBP1.37□□□□□ -2.19
VPS16YPL045W YEL014CP39999 101 aa1.37□□□□□ -2.19
VPS16YPL045W NCE101Q02820 53 aa1.37□□□□□ -2.19
VPS16YPL045W RAF1Q06891 181 aa1.37□□□□□ -2.19
VPS16YPL045W RPB11P38902 120 aa1.36□□□□□ -2.19
VPS16YPL045W MPC1P53157 130 aaKnown RBP1.36□□□□□ -2.19
VPS16YPL045W YPR153WQ06537 140 aa1.36□□□□□ -2.19
VPS16YPL045W YOR376W-AQ3E805 51 aa1.36□□□□□ -2.19
VPS16YPL045W HSP150P32478 413 aa1.36□□□□□ -2.19
VPS16YPL045W YEL008WP40001 126 aa1.36□□□□□ -2.19
VPS16YPL045W YAE1P47118 141 aaPredicted RBP1.36□□□□□ -2.19
VPS16YPL045W BAT2P47176 376 aaKnown RBP1.36□□□□□ -2.19
VPS16YPL045W YMR252CQ04814 134 aa1.36□□□□□ -2.19
VPS16YPL045W YLR042CQ07990 161 aa1.36□□□□□ -2.19
VPS16YPL045W IRA1P18963 3092 aa1.36□□□□□ -2.19
VPS16YPL045W QCR8P08525 94 aa1.35□□□□□ -2.19
VPS16YPL045W YHR214C-DP0CX93 97 aa1.35□□□□□ -2.19
VPS16YPL045W QCR10P37299 77 aa1.35□□□□□ -2.19
VPS16YPL045W IPT1P38954 527 aa1.35□□□□□ -2.19
VPS16YPL045W RCE1Q03530 315 aa1.35□□□□□ -2.19
VPS16YPL045W FCF2Q12035 217 aaPredicted RBP1.35□□□□□ -2.19
VPS16YPL045W MHF1Q3E835 90 aa1.35□□□□□ -2.19
VPS16YPL045W MEC1P38111 2368 aa1.35□□□□□ -2.19
VPS16YPL045W YFR010W-AP0C5N0 62 aa1.35□□□□□ -2.19
VPS16YPL045W TIM12P32830 109 aa1.35□□□□□ -2.19
VPS16YPL045W SRL3P36167 246 aa1.35□□□□□ -2.19
VPS16YPL045W CWC27Q02770 301 aa1.35□□□□□ -2.19
VPS16YPL045W YBR056W-AI2HB52 66 aa1.34□□□□□ -2.19
VPS16YPL045W YOR289WQ12012 251 aaPredicted RBP1.34□□□□□ -2.19
VPS16YPL045W KTI11Q3E840 82 aa1.34□□□□□ -2.19
VPS16YPL045W MRPL44P19956 98 aa1.34□□□□□ -2.2
VPS16YPL045W GSP1P32835 219 aaKnown RBP1.34□□□□□ -2.2
VPS16YPL045W MIX14Q04341 121 aa1.34□□□□□ -2.2
VPS16YPL045W NAT5Q08689 176 aa1.34□□□□□ -2.2
VPS16YPL045W YOR343CQ12484 108 aa1.34□□□□□ -2.2
VPS16YPL045W YNL146C-AQ3E7Z1 64 aa1.34□□□□□ -2.2
VPS16YPL045W TAR1Q8TGM6 124 aa1.34□□□□□ -2.2
VPS16YPL045W MED11Q99278 115 aa1.34□□□□□ -2.2
VPS16YPL045W YER039C-AP0CD97 72 aa1.33□□□□□ -2.2
VPS16YPL045W ANB1P19211 157 aa1.33□□□□□ -2.2
VPS16YPL045W YKL044WP36092 106 aa1.33□□□□□ -2.2
VPS16YPL045W ECM31P38122 312 aa1.33□□□□□ -2.2
VPS16YPL045W RPL13BP40212 199 aaKnown RBP1.33□□□□□ -2.2
VPS16YPL045W DCV1P43595 202 aa1.33□□□□□ -2.2
VPS16YPL045W YOR097CQ12274 175 aaPredicted RBP1.33□□□□□ -2.2
VPS16YPL045W RPL13AQ12690 199 aaPredicted RBP1.33□□□□□ -2.2
VPS16YPL045W NUM1Q00402 2748 aa1.33□□□□□ -2.2
VPS16YPL045W RPL43AP0CX25 92 aaKnown RBP1.33□□□□□ -2.2
VPS16YPL045W RPL43BP0CX26 92 aa1.33□□□□□ -2.2
VPS16YPL045W YAR029WP39549 74 aa1.33□□□□□ -2.2
VPS16YPL045W BPH1P25356 2167 aa1.32□□□□□ -2.2
VPS16YPL045W PAU21P0CE86 164 aa1.32□□□□□ -2.2
VPS16YPL045W PAU22P0CE87 164 aa1.32□□□□□ -2.2
VPS16YPL045W FUN14P18411 198 aa1.32□□□□□ -2.2
VPS16YPL045W YGL149WP53116 101 aa1.32□□□□□ -2.2
VPS16YPL045W COX9P07255 59 aa1.32□□□□□ -2.2
VPS16YPL045W YGL010WP25338 174 aa1.32□□□□□ -2.2
VPS16YPL045W YHL037CP38733 133 aa1.32□□□□□ -2.2
VPS16YPL045W HSP10P38910 106 aa1.32□□□□□ -2.2
VPS16YPL045W PAM16P42949 149 aa1.32□□□□□ -2.2
VPS16YPL045W YFL051CP43552 160 aa1.32□□□□□ -2.2
VPS16YPL045W ERV14P53173 138 aa1.32□□□□□ -2.2
VPS16YPL045W BRP1P53194 125 aa1.32□□□□□ -2.2
VPS16YPL045W PAU12P53343 120 aa1.32□□□□□ -2.2
VPS16YPL045W COA3Q3E7B2 85 aa1.32□□□□□ -2.2
VPS16YPL045W TRA1P38811 3744 aa1.31□□□□□ -2.2
VPS16YPL045W SEC59P20048 519 aa1.31□□□□□ -2.2
VPS16YPL045W YCL042WP25572 119 aa1.31□□□□□ -2.2
VPS16YPL045W SNF11P38956 169 aa1.31□□□□□ -2.2
VPS16YPL045W YGL230CP53074 147 aa1.31□□□□□ -2.2
VPS16YPL045W YPL067CQ02754 198 aa1.31□□□□□ -2.2
VPS16YPL045W YBR242WP38331 238 aa1.3□□□□□ -2.2
VPS16YPL045W RTR2Q12378 196 aa1.3□□□□□ -2.2
VPS16YPL045W PAU2P32612 120 aa1.3□□□□□ -2.2
VPS16YPL045W YFR035CP43608 114 aa1.3□□□□□ -2.2
VPS16YPL045W SIP18P50263 79 aa1.3□□□□□ -2.2
VPS16YPL045W PRE1P22141 198 aaKnown RBP1.29□□□□□ -2.2
VPS16YPL045W PAU24P38155 120 aa1.29□□□□□ -2.2
VPS16YPL045W YFL065CP43539 102 aa1.29□□□□□ -2.2
VPS16YPL045W GPI19Q04082 140 aa1.29□□□□□ -2.2
VPS16YPL045W RTC6O14464 93 aa1.29□□□□□ -2.2
VPS16YPL045W HYP2P23301 157 aaKnown RBP1.29□□□□□ -2.2
VPS16YPL045W UTP11P34247 250 aaPredicted RBP1.29□□□□□ -2.2
VPS16YPL045W ATG8P38182 117 aaRIP-Chip data1.29□□□□□ -2.2not detected
VPS16YPL045W YBR027CP38220 110 aa1.29□□□□□ -2.2
VPS16YPL045W FYV7Q12247 151 aa1.29□□□□□ -2.2
VPS16YPL045W HAP3P13434 144 aa1.28□□□□□ -2.2
VPS16YPL045W TDA2P40045 126 aa1.28□□□□□ -2.2
VPS16YPL045W SED1Q01589 338 aa1.28□□□□□ -2.2
VPS16YPL045W FIT3Q08907 204 aa1.28□□□□□ -2.2
VPS16YPL045W URA2P07259 2214 aaKnown RBP1.28□□□□□ -2.2
VPS16YPL045W VAR1P02381 398 aa1.28□□□□□ -2.2
VPS16YPL045W EMP24P32803 203 aaKnown RBP1.28□□□□□ -2.2
VPS16YPL045W SUS1Q6WNK7 96 aa1.28□□□□□ -2.2
VPS16YPL045W YGL014C-AP0C5N1 53 aa1.27□□□□□ -2.21
VPS16YPL045W YCR101CP25607 182 aa1.27□□□□□ -2.21
VPS16YPL045W MRPL11P36521 249 aaPredicted RBP1.27□□□□□ -2.21
VPS16YPL045W FIT1Q04433 528 aa1.27□□□□□ -2.21
VPS16YPL045W Q0297Q9ZZV8 51 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms