RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	CCW14	O13547	238 aa		0.67	□□□□□ -2.3
SFM1	YOR021C	YCR101C	P25607	182 aa		0.67	□□□□□ -2.3
SFM1	YOR021C	YMR090W	Q04304	227 aa	Known RBP	0.67	□□□□□ -2.3
SFM1	YOR021C	MIC10	Q96VH5	97 aa		0.67	□□□□□ -2.3
SFM1	YOR021C	UBC4	P15731	148 aa		0.66	□□□□□ -2.3
SFM1	YOR021C	AUA1	P32450	94 aa		0.66	□□□□□ -2.3
SFM1	YOR021C	SRB6	P32570	121 aa		0.66	□□□□□ -2.3
SFM1	YOR021C	YBR090C	P38253	122 aa		0.66	□□□□□ -2.3
SFM1	YOR021C	YDR010C	Q12426	110 aa		0.66	□□□□□ -2.3
SFM1	YOR021C	UBC5	P15732	148 aa		0.65	□□□□□ -2.31
SFM1	YOR021C	YIL086C	P40503	102 aa		0.65	□□□□□ -2.31
SFM1	YOR021C	YDR210W	Q03482	75 aa		0.65	□□□□□ -2.31
SFM1	YOR021C	BPT1	P14772	1559 aa		0.65	□□□□□ -2.31
SFM1	YOR021C	PDR11	P40550	1411 aa		0.64	□□□□□ -2.31
SFM1	YOR021C	GEA1	P47102	1408 aa	Predicted RBP	0.64	□□□□□ -2.31
SFM1	YOR021C	YLR255C	O13574	117 aa		0.64	□□□□□ -2.31
SFM1	YOR021C	COX19	Q3E731	98 aa		0.64	□□□□□ -2.31
SFM1	YOR021C	YBR072C-A	Q3E794	53 aa		0.64	□□□□□ -2.31
SFM1	YOR021C	KRE5	P22023	1365 aa		0.64	□□□□□ -2.31
SFM1	YOR021C	SHU1	P38751	150 aa		0.63	□□□□□ -2.31
SFM1	YOR021C	GCV3	P39726	170 aa	Predicted RBP	0.63	□□□□□ -2.31
SFM1	YOR021C	MIX14	Q04341	121 aa		0.63	□□□□□ -2.31
SFM1	YOR021C	YPL038W-A	Q3E7B4	63 aa		0.63	□□□□□ -2.31
SFM1	YOR021C	SEC7	P11075	2009 aa	Known RBP	0.62	□□□□□ -2.31
SFM1	YOR021C	YHR173C	P38864	112 aa		0.62	□□□□□ -2.31
SFM1	YOR021C	FYV7	Q12247	151 aa		0.62	□□□□□ -2.31
SFM1	YOR021C	TOP2	P06786	1428 aa	Known RBP	0.62	□□□□□ -2.31
SFM1	YOR021C	TY4B-H	P0C2J7	1802 aa		0.61	□□□□□ -2.31
SFM1	YOR021C	COX12	Q01519	83 aa		0.61	□□□□□ -2.31
SFM1	YOR021C	GEA2	P39993	1459 aa	Known RBP	0.61	□□□□□ -2.31
SFM1	YOR021C	REV3	P14284	1504 aa		0.6	□□□□□ -2.31
SFM1	YOR021C	MPC2	P38857	129 aa		0.6	□□□□□ -2.31
SFM1	YOR021C	YOR289W	Q12012	251 aa	Predicted RBP	0.6	□□□□□ -2.31
SFM1	YOR021C	YCR095W-A	Q3E787	52 aa		0.6	□□□□□ -2.31
SFM1	YOR021C	SRB8	P25648	1427 aa		0.6	□□□□□ -2.31
SFM1	YOR021C	BUD4	P47136	1447 aa		0.6	□□□□□ -2.31
SFM1	YOR021C	RPS29B	P41058	56 aa	Known RBP	0.59	□□□□□ -2.31
SFM1	YOR021C	YPL225W	Q08971	146 aa	Known RBP	0.59	□□□□□ -2.31
SFM1	YOR021C	KSH1	Q8TGJ3	72 aa		0.59	□□□□□ -2.31
SFM1	YOR021C	NTE1	Q04958	1679 aa		0.59	□□□□□ -2.32
SFM1	YOR021C	ROX3	P25046	220 aa		0.58	□□□□□ -2.32
SFM1	YOR021C	PAU5	P43575	122 aa		0.58	□□□□□ -2.32
SFM1	YOR021C	RSM19	P53733	91 aa	Predicted RBP	0.58	□□□□□ -2.32
SFM1	YOR021C	MRX7	P53869	86 aa		0.58	□□□□□ -2.32
SFM1	YOR021C	SNA2	P56508	79 aa		0.58	□□□□□ -2.32
SFM1	YOR021C	SSN2	P38931	1420 aa		0.57	□□□□□ -2.32
SFM1	YOR021C	MRP17	P28778	131 aa		0.57	□□□□□ -2.32
SFM1	YOR021C	YHL005C	P38752	130 aa		0.57	□□□□□ -2.32
SFM1	YOR021C	ZEO1	Q08245	113 aa		0.57	□□□□□ -2.32
SFM1	YOR021C	SNF2	P22082	1703 aa		0.57	□□□□□ -2.32
SFM1	YOR021C	CAT8	P39113	1433 aa		0.56	□□□□□ -2.32
SFM1	YOR021C	YBR292C	P38357	123 aa		0.56	□□□□□ -2.32
SFM1	YOR021C	BLM10	P43583	2143 aa		0.55	□□□□□ -2.32
SFM1	YOR021C	MRPL38	P35996	138 aa	Predicted RBP	0.55	□□□□□ -2.32
SFM1	YOR021C	ICY1	Q04329	127 aa		0.55	□□□□□ -2.32
SFM1	YOR021C	YOL164W-A	Q3E7A5	60 aa		0.55	□□□□□ -2.32
SFM1	YOR021C	BNI1	P41832	1953 aa		0.54	□□□□□ -2.32
SFM1	YOR021C	RPS11A	P0CX47	156 aa	Known RBP	0.54	□□□□□ -2.32
SFM1	YOR021C	RPS11B	P0CX48	156 aa	Known RBP	0.54	□□□□□ -2.32
SFM1	YOR021C	EMC5	P40540	141 aa		0.54	□□□□□ -2.32
SFM1	YOR021C	RRT15	Q3E811	62 aa		0.54	□□□□□ -2.32
SFM1	YOR021C	BRR2	P32639	2163 aa	Known RBP	0.54	□□□□□ -2.32
SFM1	YOR021C	PAU6	P0CE90	120 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	PAU18	P0CE91	120 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	HMRA1	P0CY11	126 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	YBL071C	P38185	102 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	AIM19	P40502	157 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	YCR075W-A	Q3E830	75 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	YNR034W-A	Q3E841	98 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	YCL001W-B	Q96VH2	84 aa		0.53	□□□□□ -2.32
SFM1	YOR021C	PAU20	Q08322	120 aa		0.52	□□□□□ -2.33
SFM1	YOR021C	RSF2	P46974	1380 aa		0.52	□□□□□ -2.33
SFM1	YOR021C	POL2	P21951	2222 aa	Known RBP	0.52	□□□□□ -2.33
SFM1	YOR021C	RPA12	P32529	125 aa	Known RBP	0.51	□□□□□ -2.33
SFM1	YOR021C	MSL1	P40567	111 aa	Predicted RBP	0.51	□□□□□ -2.33
SFM1	YOR021C	RIM15	P43565	1770 aa		0.51	□□□□□ -2.33
SFM1	YOR021C	YDR042C	Q03205	200 aa		0.5	□□□□□ -2.33
SFM1	YOR021C	YMR082C	Q04276	118 aa		0.5	□□□□□ -2.33
SFM1	YOR021C	YDR029W	Q12111	104 aa		0.5	□□□□□ -2.33
SFM1	YOR021C	YRF1-1	P0CX20	1796 aa		0.5	□□□□□ -2.33
SFM1	YOR021C	YRF1-5	P0CX21	1796 aa		0.5	□□□□□ -2.33
SFM1	YOR021C	YRF1-8	P0CX22	1796 aa		0.5	□□□□□ -2.33
SFM1	YOR021C	SKI3	P17883	1432 aa	Known RBP	0.49	□□□□□ -2.33
SFM1	YOR021C	PAU1	P0CE88	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	PAU14	P0CE89	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	PAU8	P0CE92	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	PAU11	P0CE93	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	PAU13	P38725	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	RSM18	P40033	138 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	PAU10	Q03050	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	NHP10	Q03435	203 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	PAU9	Q3E770	120 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	RPA190	P10964	1664 aa	Known RBP	0.49	□□□□□ -2.33
SFM1	YOR021C	PDR10	P51533	1564 aa		0.49	□□□□□ -2.33
SFM1	YOR021C	MYO1	P08964	1928 aa		0.48	□□□□□ -2.33
SFM1	YOR021C	FAS2	P19097	1887 aa	Known RBP	0.48	□□□□□ -2.33
SFM1	YOR021C	SPC1	P46965	94 aa		0.48	□□□□□ -2.33
SFM1	YOR021C	YNL190W	P53872	204 aa		0.48	□□□□□ -2.33
SFM1	YOR021C	SCP1	Q08873	200 aa		0.48	□□□□□ -2.33
SFM1	YOR021C	YGL194C-A	Q2V2P6	80 aa		0.48	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms