RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C PAI3P01094 68 aa2.14□□□□□ -2.07
SSN8YNL025C KRE1P17260 313 aa2.14□□□□□ -2.07
SSN8YNL025C RPA12P32529 125 aaKnown RBP2.14□□□□□ -2.07
SSN8YNL025C ATG8P38182 117 aaRIP-Chip data2.14□□□□□ -2.07not detected
SSN8YNL025C YFL051CP43552 160 aa2.14□□□□□ -2.07
SSN8YNL025C SEN15Q04675 128 aa2.14□□□□□ -2.07
SSN8YNL025C HRT1Q08273 121 aa2.14□□□□□ -2.07
SSN8YNL025C NTE1Q04958 1679 aa2.14□□□□□ -2.07
SSN8YNL025C RPO21P04050 1733 aaKnown RBP2.14□□□□□ -2.07
SSN8YNL025C BCK1Q01389 1478 aa2.14□□□□□ -2.07
SSN8YNL025C USO1P25386 1790 aa2.13□□□□□ -2.07
SSN8YNL025C SPO14P36126 1683 aa2.13□□□□□ -2.07
SSN8YNL025C NUP192P47054 1683 aa2.13□□□□□ -2.07
SSN8YNL025C NUP188P52593 1655 aaKnown RBP2.13□□□□□ -2.07
SSN8YNL025C RTC6O14464 93 aa2.13□□□□□ -2.07
SSN8YNL025C PAU19P0CE85 124 aa2.13□□□□□ -2.07
SSN8YNL025C PAU3P25610 124 aa2.13□□□□□ -2.07
SSN8YNL025C UTH1P36135 365 aa2.13□□□□□ -2.07
SSN8YNL025C RSM18P40033 138 aa2.13□□□□□ -2.07
SSN8YNL025C YFL065CP43539 102 aa2.13□□□□□ -2.07
SSN8YNL025C PAU12P53343 120 aa2.13□□□□□ -2.07
SSN8YNL025C YPR203WQ08994 102 aa2.13□□□□□ -2.07
SSN8YNL025C MHF1Q3E835 90 aa2.13□□□□□ -2.07
SSN8YNL025C ENV10Q99382 181 aa2.13□□□□□ -2.07
SSN8YNL025C TY1B-BRQ12193 1756 aa2.13□□□□□ -2.07
SSN8YNL025C TY1B-GR3Q12316 1755 aa2.13□□□□□ -2.07
SSN8YNL025C TY1B-ORQ92393 1755 aa2.13□□□□□ -2.07
SSN8YNL025C DUR1,2P32528 1835 aaKnown RBP2.12□□□□□ -2.07
SSN8YNL025C PFY1P07274 126 aa2.12□□□□□ -2.07
SSN8YNL025C YJL197C-AP0C5P0 93 aa2.12□□□□□ -2.07
SSN8YNL025C PAU2P32612 120 aa2.12□□□□□ -2.07
SSN8YNL025C TOM6P33448 61 aa2.12□□□□□ -2.07
SSN8YNL025C YJL027CP47063 138 aaPredicted RBP2.12□□□□□ -2.07
SSN8YNL025C COA4Q05809 96 aa2.12□□□□□ -2.07
SSN8YNL025C UTP10P42945 1769 aaKnown RBP2.12□□□□□ -2.07
SSN8YNL025C BUD3P25558 1636 aa2.12□□□□□ -2.07
SSN8YNL025C RPL40AP0CH08 128 aaKnown RBP2.11□□□□□ -2.07
SSN8YNL025C RPL40BP0CH09 128 aaKnown RBP2.11□□□□□ -2.07
SSN8YNL025C SRX1P36077 127 aa2.11□□□□□ -2.07
SSN8YNL025C SWM2P40342 146 aa2.11□□□□□ -2.07
SSN8YNL025C RGM1Q00453 211 aa2.11□□□□□ -2.07
SSN8YNL025C FIT2Q08906 153 aa2.11□□□□□ -2.07
SSN8YNL025C YRF1-2P40105 1681 aa2.11□□□□□ -2.07
SSN8YNL025C YHR213WP0CI67 198 aa2.1□□□□□ -2.07
SSN8YNL025C HSP150P32478 413 aa2.1□□□□□ -2.07
SSN8YNL025C PAU16P35994 123 aa2.1□□□□□ -2.07
SSN8YNL025C PAU24P38155 120 aa2.1□□□□□ -2.07
SSN8YNL025C YER084WP40057 128 aa2.1□□□□□ -2.07
SSN8YNL025C YIR020CP40575 100 aa2.1□□□□□ -2.07
SSN8YNL025C PAU15P40585 124 aa2.1□□□□□ -2.07
SSN8YNL025C YJL144WP47009 104 aa2.1□□□□□ -2.07
SSN8YNL025C RRT15Q3E811 62 aa2.1□□□□□ -2.07
SSN8YNL025C MHF2Q3E829 80 aa2.1□□□□□ -2.07
SSN8YNL025C APC1P53886 1748 aa2.09□□□□□ -2.07
SSN8YNL025C RPL22AP05749 121 aaKnown RBP2.09□□□□□ -2.07
SSN8YNL025C RPB7P34087 171 aa2.09□□□□□ -2.07
SSN8YNL025C COX23P38824 151 aa2.09□□□□□ -2.07
SSN8YNL025C DSE2P38844 325 aa2.09□□□□□ -2.07
SSN8YNL025C CYT2Q00873 224 aa2.09□□□□□ -2.07
SSN8YNL025C ICY1Q04329 127 aa2.09□□□□□ -2.07
SSN8YNL025C YLR194CQ05777 254 aa2.09□□□□□ -2.07
SSN8YNL025C RDS3Q06835 107 aaPredicted RBP2.09□□□□□ -2.07
SSN8YNL025C YOL118CQ08259 102 aa2.09□□□□□ -2.07
SSN8YNL025C PRM3Q08931 133 aa2.09□□□□□ -2.07
SSN8YNL025C YMR175W-AQ3E766 64 aa2.09□□□□□ -2.07
SSN8YNL025C CMC4Q3E7A9 73 aa2.09□□□□□ -2.07
SSN8YNL025C YRF1-3P0CX14 1859 aa2.08□□□□□ -2.08
SSN8YNL025C YRF1-7P0CX15 1859 aa2.08□□□□□ -2.08
SSN8YNL025C YRF1-6P53819 1859 aa2.08□□□□□ -2.08
SSN8YNL025C QCR8P08525 94 aa2.08□□□□□ -2.08
SSN8YNL025C MRP17P28778 131 aa2.08□□□□□ -2.08
SSN8YNL025C UTR5P32630 166 aa2.08□□□□□ -2.08
SSN8YNL025C YBR027CP38220 110 aa2.08□□□□□ -2.08
SSN8YNL025C POR2P40478 281 aa2.08□□□□□ -2.08
SSN8YNL025C AVO2Q04749 426 aa2.08□□□□□ -2.08
SSN8YNL025C URB1P34241 1764 aaKnown RBP2.08□□□□□ -2.08
SSN8YNL025C YBR013CP38215 129 aa2.07□□□□□ -2.08
SSN8YNL025C YJR146WP47174 117 aa2.07□□□□□ -2.08
SSN8YNL025C YCL048W-AQ2V2Q2 79 aa2.07□□□□□ -2.08
SSN8YNL025C ATX1P38636 73 aa2.06□□□□□ -2.08
SSN8YNL025C IMP2P46972 177 aa2.06□□□□□ -2.08
SSN8YNL025C ICS3P47034 131 aa2.06□□□□□ -2.08
SSN8YNL025C YMR321CQ04898 105 aa2.06□□□□□ -2.08
SSN8YNL025C POC4Q12245 148 aaPredicted RBP2.06□□□□□ -2.08
SSN8YNL025C YFR010W-AP0C5N0 62 aa2.05□□□□□ -2.08
SSN8YNL025C HMRA2P0CY13 119 aa2.05□□□□□ -2.08
SSN8YNL025C ROX3P25046 220 aa2.05□□□□□ -2.08
SSN8YNL025C SSS1P35179 80 aa2.05□□□□□ -2.08
SSN8YNL025C PAU5P43575 122 aa2.05□□□□□ -2.08
SSN8YNL025C LSM6Q06406 86 aaKnown RBP2.05□□□□□ -2.08
SSN8YNL025C VAM10Q08474 114 aa2.05□□□□□ -2.08
SSN8YNL025C SEC7P11075 2009 aaKnown RBP2.04□□□□□ -2.08
SSN8YNL025C LST8P41318 303 aa2.04□□□□□ -2.08
SSN8YNL025C MIC27P50945 234 aa2.04□□□□□ -2.08
SSN8YNL025C SNA2P56508 79 aa2.04□□□□□ -2.08
SSN8YNL025C TY1B-NL2Q99337 1749 aaKnown RBP2.03□□□□□ -2.08
SSN8YNL025C YPR096CO13587 100 aa2.03□□□□□ -2.08
SSN8YNL025C RPS22AP0C0W1 130 aaKnown RBP2.03□□□□□ -2.08
SSN8YNL025C YHL037CP38733 133 aa2.03□□□□□ -2.08
SSN8YNL025C SED1Q01589 338 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms