RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C UBC12P52491 188 aa2.07□□□□□ -2.08
SKG1YKR100C YKE4P40544 346 aa2.06□□□□□ -2.08
SKG1YKR100C MRPL24P36525 258 aaPredicted RBP2.05□□□□□ -2.08
SKG1YKR100C YHL018WP38744 120 aaPredicted RBP2.05□□□□□ -2.08
SKG1YKR100C YFL019CP43576 117 aa2.05□□□□□ -2.08
SKG1YKR100C YNR077CP53758 84 aa2.05□□□□□ -2.08
SKG1YKR100C YNL122CP53921 115 aaPredicted RBP2.05□□□□□ -2.08
SKG1YKR100C CYT2Q00873 224 aa2.05□□□□□ -2.08
SKG1YKR100C GIM5Q04493 163 aa2.05□□□□□ -2.08
SKG1YKR100C SRP14P38985 146 aa2.04□□□□□ -2.08
SKG1YKR100C YJR111CP47148 283 aaKnown RBP2.04□□□□□ -2.08
SKG1YKR100C YKR041WP36134 250 aa2.03□□□□□ -2.08
SKG1YKR100C YHR173CP38864 112 aa2.03□□□□□ -2.08
SKG1YKR100C CWP2P43497 92 aa2.03□□□□□ -2.08
SKG1YKR100C CMC2Q3E7A4 109 aa2.03□□□□□ -2.08
SKG1YKR100C Q0017Q9ZZX8 53 aa2.03□□□□□ -2.08
SKG1YKR100C SPS2P08459 502 aa2.02□□□□□ -2.09
SKG1YKR100C SKI6P46948 246 aaPredicted RBP2.02□□□□□ -2.09
SKG1YKR100C YOL014WQ08110 124 aa2.02□□□□□ -2.09
SKG1YKR100C SCP1Q08873 200 aa2.02□□□□□ -2.09
SKG1YKR100C YDL085C-AQ3E7B7 68 aaKnown RBP2.02□□□□□ -2.09
SKG1YKR100C PCC1Q3E833 88 aa2.02□□□□□ -2.09
SKG1YKR100C UGX2P32772 223 aa2.01□□□□□ -2.09
SKG1YKR100C YEA4P40004 342 aa2.01□□□□□ -2.09
SKG1YKR100C SER2P42941 309 aa2.01□□□□□ -2.09
SKG1YKR100C DCV1P43595 202 aa2.01□□□□□ -2.09
SKG1YKR100C YLR031WQ07978 186 aa2.01□□□□□ -2.09
SKG1YKR100C FSF1Q12029 327 aaKnown RBP2.01□□□□□ -2.09
SKG1YKR100C VTC1P40046 129 aaRIP-Chip data2□□□□□ -2.09not detected
SKG1YKR100C RPL13BP40212 199 aaKnown RBP2□□□□□ -2.09
SKG1YKR100C RPL13AQ12690 199 aaPredicted RBP2□□□□□ -2.09
SKG1YKR100C YML100W-AQ8TGT0 57 aa2□□□□□ -2.09
SKG1YKR100C POR1P04840 283 aaKnown RBP1.99□□□□□ -2.09
SKG1YKR100C MRP49P32388 137 aa1.99□□□□□ -2.09
SKG1YKR100C KNH1P50112 268 aa1.99□□□□□ -2.09
SKG1YKR100C MIC27P50945 234 aa1.99□□□□□ -2.09
SKG1YKR100C GRX5Q02784 150 aa1.99□□□□□ -2.09
SKG1YKR100C PET20Q99373 253 aa1.99□□□□□ -2.09
SKG1YKR100C RPS25BP0C0T4 108 aaKnown RBP1.98□□□□□ -2.09
SKG1YKR100C DSE2P38844 325 aa1.98□□□□□ -2.09
SKG1YKR100C NVJ1P38881 321 aa1.98□□□□□ -2.09
SKG1YKR100C SPG1P50088 95 aa1.98□□□□□ -2.09
SKG1YKR100C JAC1P53193 184 aa1.98□□□□□ -2.09
SKG1YKR100C MPC3P53311 146 aa1.98□□□□□ -2.09
SKG1YKR100C SHH4Q06236 168 aa1.98□□□□□ -2.09
SKG1YKR100C RPS25AQ3E792 108 aaPredicted RBP1.98□□□□□ -2.09
SKG1YKR100C YPR014CQ6B0W2 109 aa1.98□□□□□ -2.09
SKG1YKR100C MRP17P28778 131 aa1.97□□□□□ -2.09
SKG1YKR100C YER134CP40081 178 aa1.97□□□□□ -2.09
SKG1YKR100C YGL193CP53097 103 aa1.97□□□□□ -2.09
SKG1YKR100C HUA1P40325 198 aa1.96□□□□□ -2.1
SKG1YKR100C SHH3Q04487 196 aa1.96□□□□□ -2.1
SKG1YKR100C NAT3Q06504 195 aa1.96□□□□□ -2.1
SKG1YKR100C Q0032Q9ZZX7 96 aa1.96□□□□□ -2.1
SKG1YKR100C YLR236CA0A023PZG4 107 aa1.95□□□□□ -2.1
SKG1YKR100C ENV10Q99382 181 aa1.95□□□□□ -2.1
SKG1YKR100C YBR209WP38311 105 aa1.94□□□□□ -2.1
SKG1YKR100C SYM1Q06563 197 aa1.94□□□□□ -2.1
SKG1YKR100C ATG41Q12048 136 aa1.94□□□□□ -2.1
SKG1YKR100C YLR050CQ12155 161 aaKnown RBP1.94□□□□□ -2.1
SKG1YKR100C YMR295CQ03559 197 aa1.93□□□□□ -2.1
SKG1YKR100C CUE4Q04201 117 aaPredicted RBP1.92□□□□□ -2.1
SKG1YKR100C QCR2P07257 368 aa1.91□□□□□ -2.1
SKG1YKR100C YBR219CP38317 127 aa1.91□□□□□ -2.1
SKG1YKR100C POP3P53833 195 aaPredicted RBP1.91□□□□□ -2.1
SKG1YKR100C YMR175W-AQ3E766 64 aa1.91□□□□□ -2.1
SKG1YKR100C PAM17P36147 197 aa1.9□□□□□ -2.11
SKG1YKR100C AME1P38313 324 aa1.9□□□□□ -2.11
SKG1YKR100C YMR141CP40211 102 aa1.9□□□□□ -2.11
SKG1YKR100C SBH1P52870 82 aa1.9□□□□□ -2.11
SKG1YKR100C ANT1Q06497 328 aa1.9□□□□□ -2.11
SKG1YKR100C YLR412C-AQ3E742 68 aa1.9□□□□□ -2.11
SKG1YKR100C SEC11P15367 167 aa1.89□□□□□ -2.11
SKG1YKR100C YHL005CP38752 130 aa1.89□□□□□ -2.11
SKG1YKR100C SPC25P40014 221 aa1.89□□□□□ -2.11
SKG1YKR100C PLP1Q04004 230 aa1.89□□□□□ -2.11
SKG1YKR100C YMR082CQ04276 118 aa1.89□□□□□ -2.11
SKG1YKR100C YPL073CP40323 161 aa1.88□□□□□ -2.11
SKG1YKR100C YLR118CQ12354 227 aa1.88□□□□□ -2.11
SKG1YKR100C YLR342W-AQ3E810 57 aa1.88□□□□□ -2.11
SKG1YKR100C COX7P10174 60 aa1.87□□□□□ -2.11
SKG1YKR100C SWM2P40342 146 aa1.87□□□□□ -2.11
SKG1YKR100C VPS28Q02767 242 aa1.87□□□□□ -2.11
SKG1YKR100C YLR162WQ06235 118 aa1.86□□□□□ -2.11
SKG1YKR100C ATP20Q12233 115 aa1.86□□□□□ -2.11
SKG1YKR100C YGR121W-AQ3E816 71 aa1.86□□□□□ -2.11
SKG1YKR100C RPS28BP0C0X0 67 aaKnown RBP1.85□□□□□ -2.11
SKG1YKR100C YER039C-AP0CD97 72 aa1.85□□□□□ -2.11
SKG1YKR100C HSP12P22943 109 aaKnown RBP1.85□□□□□ -2.11
SKG1YKR100C YJL009WP47078 108 aa1.85□□□□□ -2.11
SKG1YKR100C RPS28AQ3E7X9 67 aaPredicted RBP1.85□□□□□ -2.11
SKG1YKR100C YGL010WP25338 174 aa1.84□□□□□ -2.11
SKG1YKR100C FYV4P38783 130 aaPredicted RBP1.84□□□□□ -2.11
SKG1YKR100C YJR128WP47162 119 aa1.84□□□□□ -2.11
SKG1YKR100C KEI1Q06346 221 aa1.84□□□□□ -2.11
SKG1YKR100C AQY2P0CD90 149 aa1.83□□□□□ -2.12
SKG1YKR100C TMA20P89886 181 aaPredicted RBP1.83□□□□□ -2.12
SKG1YKR100C MAK3Q03503 176 aa1.83□□□□□ -2.12
SKG1YKR100C YMR090WQ04304 227 aaKnown RBP1.83□□□□□ -2.12
SKG1YKR100C COX8P04039 78 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms