RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W ROX3P25046 220 aa1.3□□□□□ -2.2
TRM2YKR056W GCV3P39726 170 aaPredicted RBP1.3□□□□□ -2.2
TRM2YKR056W LCL2Q08045 131 aa1.3□□□□□ -2.2
TRM2YKR056W SRB6P32570 121 aa1.29□□□□□ -2.2
TRM2YKR056W YHR138CP38841 114 aaPredicted RBP1.29□□□□□ -2.2
TRM2YKR056W YAR064WP39563 99 aa1.29□□□□□ -2.2
TRM2YKR056W YDR042CQ03205 200 aa1.29□□□□□ -2.2
TRM2YKR056W YMR321CQ04898 105 aa1.29□□□□□ -2.2
TRM2YKR056W RPS22BQ3E7Y3 130 aaKnown RBP1.29□□□□□ -2.2
TRM2YKR056W YLR255CO13574 117 aa1.28□□□□□ -2.2
TRM2YKR056W LCL1Q02786 101 aa1.28□□□□□ -2.2
TRM2YKR056W YMR082CQ04276 118 aa1.28□□□□□ -2.2
TRM2YKR056W YCR095W-AQ3E787 52 aa1.28□□□□□ -2.2
TRM2YKR056W SEC7P11075 2009 aaKnown RBP1.28□□□□□ -2.2
TRM2YKR056W PAU6P0CE90 120 aa1.28□□□□□ -2.2
TRM2YKR056W PAU18P0CE91 120 aa1.28□□□□□ -2.2
TRM2YKR056W YOL118CQ08259 102 aa1.28□□□□□ -2.2
TRM2YKR056W YGL041C-BQ3E750 60 aa1.28□□□□□ -2.2
TRM2YKR056W SPC1P46965 94 aa1.27□□□□□ -2.21
TRM2YKR056W MGR2Q02889 113 aa1.27□□□□□ -2.21
TRM2YKR056W YGR240C-AQ3E786 66 aa1.27□□□□□ -2.21
TRM2YKR056W HUG1Q6Q5K6 68 aa1.27□□□□□ -2.21
TRM2YKR056W PDR10P51533 1564 aa1.27□□□□□ -2.21
TRM2YKR056W BRR2P32639 2163 aaKnown RBP1.27□□□□□ -2.21
TRM2YKR056W ECM12O13529 151 aa1.27□□□□□ -2.21
TRM2YKR056W MVB12P42939 101 aa1.27□□□□□ -2.21
TRM2YKR056W YJL009WP47078 108 aa1.27□□□□□ -2.21
TRM2YKR056W NHP10Q03435 203 aa1.27□□□□□ -2.21
TRM2YKR056W URA2P07259 2214 aaKnown RBP1.26□□□□□ -2.21
TRM2YKR056W MRP17P28778 131 aa1.26□□□□□ -2.21
TRM2YKR056W MRPL38P35996 138 aaPredicted RBP1.26□□□□□ -2.21
TRM2YKR056W HHY1P39982 102 aa1.26□□□□□ -2.21
TRM2YKR056W IMP2P46972 177 aa1.26□□□□□ -2.21
TRM2YKR056W SEC16P48415 2195 aaKnown RBP1.25□□□□□ -2.21
TRM2YKR056W MRPL31P14063 131 aaPredicted RBP1.25□□□□□ -2.21
TRM2YKR056W HUA1P40325 198 aa1.25□□□□□ -2.21
TRM2YKR056W ICS3P47034 131 aa1.25□□□□□ -2.21
TRM2YKR056W YDR210WQ03482 75 aa1.25□□□□□ -2.21
TRM2YKR056W ICY1Q04329 127 aa1.25□□□□□ -2.21
TRM2YKR056W YCL048W-AQ2V2Q2 79 aa1.25□□□□□ -2.21
TRM2YKR056W YHL005CP38752 130 aa1.25□□□□□ -2.21
TRM2YKR056W SUS1Q6WNK7 96 aa1.25□□□□□ -2.21
TRM2YKR056W CCW14O13547 238 aa1.24□□□□□ -2.21
TRM2YKR056W RSM18P40033 138 aa1.24□□□□□ -2.21
TRM2YKR056W YSP2Q06681 1438 aa1.24□□□□□ -2.21
TRM2YKR056W RPA190P10964 1664 aaKnown RBP1.24□□□□□ -2.21
TRM2YKR056W YBL071CP38185 102 aa1.23□□□□□ -2.21
TRM2YKR056W SNA2P56508 79 aa1.23□□□□□ -2.21
TRM2YKR056W LTE1P07866 1435 aa1.23□□□□□ -2.21
TRM2YKR056W CWP2P43497 92 aa1.23□□□□□ -2.21
TRM2YKR056W YOR072WQ08486 104 aa1.23□□□□□ -2.21
TRM2YKR056W YPL038W-AQ3E7B4 63 aa1.23□□□□□ -2.21
TRM2YKR056W YNR034W-AQ3E841 98 aa1.23□□□□□ -2.21
TRM2YKR056W NHP2P32495 156 aaPredicted RBP1.22□□□□□ -2.21
TRM2YKR056W YIL102CP40488 101 aa1.22□□□□□ -2.21
TRM2YKR056W POL2P21951 2222 aaKnown RBP1.22□□□□□ -2.21
TRM2YKR056W PAU8P0CE92 120 aa1.21□□□□□ -2.22
TRM2YKR056W PAU11P0CE93 120 aa1.21□□□□□ -2.22
TRM2YKR056W PAU13P38725 120 aa1.21□□□□□ -2.22
TRM2YKR056W PAU4P53427 120 aa1.21□□□□□ -2.22
TRM2YKR056W PAU10Q03050 120 aa1.21□□□□□ -2.22
TRM2YKR056W YMR175W-AQ3E766 64 aa1.21□□□□□ -2.22
TRM2YKR056W PAU9Q3E770 120 aa1.21□□□□□ -2.22
TRM2YKR056W URB1P34241 1764 aaKnown RBP1.2□□□□□ -2.22
TRM2YKR056W ESC1Q03661 1658 aaKnown RBP1.19□□□□□ -2.22
TRM2YKR056W YMR007WQ03675 126 aa1.19□□□□□ -2.22
TRM2YKR056W YJR128WP47162 119 aa1.19□□□□□ -2.22
TRM2YKR056W POL1P13382 1468 aa1.19□□□□□ -2.22
TRM2YKR056W GDB1Q06625 1536 aa1.18□□□□□ -2.22
TRM2YKR056W SRB8P25648 1427 aa1.18□□□□□ -2.22
TRM2YKR056W MRX7P53869 86 aa1.17□□□□□ -2.22
TRM2YKR056W POC4Q12245 148 aaPredicted RBP1.17□□□□□ -2.22
TRM2YKR056W RPA12P32529 125 aaKnown RBP1.17□□□□□ -2.22
TRM2YKR056W SHU1P38751 150 aa1.17□□□□□ -2.22
TRM2YKR056W YMR141CP40211 102 aa1.17□□□□□ -2.22
TRM2YKR056W RPL37AP49166 88 aaKnown RBP1.17□□□□□ -2.22
TRM2YKR056W COX12Q01519 83 aa1.17□□□□□ -2.22
TRM2YKR056W BPT1P14772 1559 aa1.16□□□□□ -2.22
TRM2YKR056W YRF1-1P0CX20 1796 aa1.16□□□□□ -2.22
TRM2YKR056W YRF1-5P0CX21 1796 aa1.16□□□□□ -2.22
TRM2YKR056W YRF1-8P0CX22 1796 aa1.16□□□□□ -2.22
TRM2YKR056W PAU1P0CE88 120 aa1.16□□□□□ -2.22
TRM2YKR056W PAU14P0CE89 120 aa1.16□□□□□ -2.22
TRM2YKR056W YCR085WP25650 117 aa1.16□□□□□ -2.22
TRM2YKR056W PAU20Q08322 120 aa1.16□□□□□ -2.22
TRM2YKR056W YHR213W-BQ8TGK1 99 aa1.16□□□□□ -2.22
TRM2YKR056W SWR1Q05471 1514 aa1.16□□□□□ -2.22
TRM2YKR056W YPK9Q12697 1472 aa1.16□□□□□ -2.22
TRM2YKR056W RPS11AP0CX47 156 aaKnown RBP1.15□□□□□ -2.22
TRM2YKR056W RPS11BP0CX48 156 aaKnown RBP1.15□□□□□ -2.22
TRM2YKR056W YPR145C-AQ2V2P0 78 aa1.15□□□□□ -2.22
TRM2YKR056W MHF2Q3E829 80 aa1.15□□□□□ -2.22
TRM2YKR056W AUA1P32450 94 aa1.15□□□□□ -2.23
TRM2YKR056W YIL086CP40503 102 aa1.15□□□□□ -2.23
TRM2YKR056W MPC2P38857 129 aa1.14□□□□□ -2.23
TRM2YKR056W YOR034C-AQ3E735 80 aa1.14□□□□□ -2.23
TRM2YKR056W YHR173CP38864 112 aa1.13□□□□□ -2.23
TRM2YKR056W AIM19P40502 157 aa1.11□□□□□ -2.23
TRM2YKR056W BSC4P53841 131 aa1.11□□□□□ -2.23
TRM2YKR056W PAU23Q07987 124 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms