RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W EMC6Q12431 108 aa2.44□□□□□ -2.02
PHD1YKL043W YOR192C-CQ3E736 78 aa2.44□□□□□ -2.02
PHD1YKL043W YMR175W-AQ3E766 64 aa2.44□□□□□ -2.02
PHD1YKL043W YBL112CQ3E7Y4 105 aa2.44□□□□□ -2.02
PHD1YKL043W YPL229WQ99395 206 aa2.44□□□□□ -2.02
PHD1YKL043W FAS1P07149 2051 aaKnown RBP2.44□□□□□ -2.02
PHD1YKL043W UBC4P15731 148 aa2.43□□□□□ -2.02
PHD1YKL043W YCR022CP25620 114 aa2.43□□□□□ -2.02
PHD1YKL043W RPL16BP26785 198 aaKnown RBP2.43□□□□□ -2.02
PHD1YKL043W REC104P33323 182 aa2.43□□□□□ -2.02
PHD1YKL043W MSA2P36157 363 aa2.43□□□□□ -2.02
PHD1YKL043W MTC6P38849 526 aa2.43□□□□□ -2.02
PHD1YKL043W DCV1P43595 202 aa2.43□□□□□ -2.02
PHD1YKL043W YGR018CP53211 109 aa2.43□□□□□ -2.02
PHD1YKL043W MOT3P54785 490 aaKnown RBP2.43□□□□□ -2.02
PHD1YKL043W HSK3P69852 69 aa2.43□□□□□ -2.02
PHD1YKL043W KSH1Q8TGJ3 72 aa2.43□□□□□ -2.02
PHD1YKL043W RPS16AP0CX51 143 aaKnown RBP2.42□□□□□ -2.02
PHD1YKL043W RPS16BP0CX52 143 aaKnown RBP2.42□□□□□ -2.02
PHD1YKL043W HMRA2P0CY13 119 aa2.42□□□□□ -2.02
PHD1YKL043W ARF1P11076 181 aaKnown RBP2.42□□□□□ -2.02
PHD1YKL043W RPS27AP35997 82 aaKnown RBP2.42□□□□□ -2.02
PHD1YKL043W RPS27BP38711 82 aa2.42□□□□□ -2.02
PHD1YKL043W RRT13P40042 185 aa2.42□□□□□ -2.02
PHD1YKL043W YNL208WP40159 199 aaKnown RBP2.42□□□□□ -2.02
PHD1YKL043W URM1P40554 99 aaPredicted RBP2.42□□□□□ -2.02
PHD1YKL043W UBC11P52492 156 aa2.42□□□□□ -2.02
PHD1YKL043W HAL1Q01766 294 aa2.42□□□□□ -2.02
PHD1YKL043W YHP1Q04116 353 aa2.42□□□□□ -2.02
PHD1YKL043W YDL009CQ12210 107 aa2.42□□□□□ -2.02
PHD1YKL043W PRP8P33334 2413 aaKnown RBP2.41□□□□□ -2.02
PHD1YKL043W BLM10P43583 2143 aa2.41□□□□□ -2.02
PHD1YKL043W YDL022C-AP0C5L6 82 aa2.41□□□□□ -2.02
PHD1YKL043W RPL42AP0CX27 106 aaKnown RBP2.41□□□□□ -2.02
PHD1YKL043W RPL42BP0CX28 106 aaKnown RBP2.41□□□□□ -2.02
PHD1YKL043W CUP1-1P0CX80 61 aa2.41□□□□□ -2.02
PHD1YKL043W CUP1-2P0CX81 61 aa2.41□□□□□ -2.02
PHD1YKL043W AGA1P32323 725 aa2.41□□□□□ -2.02
PHD1YKL043W KTI12P34253 313 aaKnown RBP2.41□□□□□ -2.02
PHD1YKL043W MPC2P38857 129 aa2.41□□□□□ -2.02
PHD1YKL043W MBB1P39534 108 aa2.41□□□□□ -2.02
PHD1YKL043W PEX17P40155 199 aa2.41□□□□□ -2.02
PHD1YKL043W YNL194CP40169 301 aa2.41□□□□□ -2.02
PHD1YKL043W YFR057WP43625 151 aa2.41□□□□□ -2.02
PHD1YKL043W ATP23P53722 227 aa2.41□□□□□ -2.02
PHD1YKL043W RXT3Q07458 294 aa2.41□□□□□ -2.02
PHD1YKL043W YOR008C-AQ3E7B9 74 aa2.41□□□□□ -2.02
PHD1YKL043W QCR8P08525 94 aa2.4□□□□□ -2.03
PHD1YKL043W YHR213WP0CI67 198 aa2.4□□□□□ -2.03
PHD1YKL043W RPL18AP0CX49 186 aaKnown RBP2.4□□□□□ -2.03
PHD1YKL043W RPL18BP0CX50 186 aaKnown RBP2.4□□□□□ -2.03
PHD1YKL043W HSP150P32478 413 aa2.4□□□□□ -2.03
PHD1YKL043W IES6P32617 166 aa2.4□□□□□ -2.03
PHD1YKL043W YRA2P36036 203 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
PHD1YKL043W DSE2P38844 325 aa2.4□□□□□ -2.03
PHD1YKL043W YER187WP40102 141 aa2.4□□□□□ -2.03
PHD1YKL043W IMP2P46972 177 aa2.4□□□□□ -2.03
PHD1YKL043W API2Q04413 109 aa2.4□□□□□ -2.03
PHD1YKL043W YLR042CQ07990 161 aa2.4□□□□□ -2.03
PHD1YKL043W RRS1Q08746 203 aaKnown RBP2.4□□□□□ -2.03
PHD1YKL043W TRA1P38811 3744 aa2.4□□□□□ -2.03
PHD1YKL043W YHR214C-DP0CX93 97 aa2.39□□□□□ -2.03
PHD1YKL043W YHR022CP38763 256 aa2.39□□□□□ -2.03
PHD1YKL043W VTC1P40046 129 aaRIP-Chip data2.39□□□□□ -2.03not detected
PHD1YKL043W SFT1P43682 97 aa2.39□□□□□ -2.03
PHD1YKL043W PGU1P47180 361 aa2.39□□□□□ -2.03
PHD1YKL043W MMS2P53152 137 aa2.39□□□□□ -2.03
PHD1YKL043W YMR181CQ03231 154 aa2.39□□□□□ -2.03
PHD1YKL043W PBA1Q05778 276 aa2.39□□□□□ -2.03
PHD1YKL043W YPL278CQ08990 100 aa2.39□□□□□ -2.03
PHD1YKL043W PPT2Q12036 173 aa2.39□□□□□ -2.03
PHD1YKL043W YOR029WQ12243 111 aa2.39□□□□□ -2.03
PHD1YKL043W YOR032W-AQ8TGS1 66 aa2.39□□□□□ -2.03
PHD1YKL043W SEC16P48415 2195 aaKnown RBP2.39□□□□□ -2.03
PHD1YKL043W MEC1P38111 2368 aa2.38□□□□□ -2.03
PHD1YKL043W RPL28P02406 149 aaKnown RBP2.38□□□□□ -2.03
PHD1YKL043W BET1P22804 142 aa2.38□□□□□ -2.03
PHD1YKL043W ADH5P38113 351 aaKnown RBP2.38□□□□□ -2.03
PHD1YKL043W RRT1P38192 103 aa2.38□□□□□ -2.03
PHD1YKL043W YMR141CP40211 102 aa2.38□□□□□ -2.03
PHD1YKL043W HUR1P45820 110 aa2.38□□□□□ -2.03
PHD1YKL043W GLO1P50107 326 aa2.38□□□□□ -2.03
PHD1YKL043W YGL260WP53056 76 aa2.38□□□□□ -2.03
PHD1YKL043W MRPS12P53732 153 aa2.38□□□□□ -2.03
PHD1YKL043W YDR209CQ03480 137 aa2.38□□□□□ -2.03
PHD1YKL043W YKL183C-AQ3E765 70 aa2.38□□□□□ -2.03
PHD1YKL043W YBR056W-AI2HB52 66 aa2.37□□□□□ -2.03
PHD1YKL043W YAL065CO13511 128 aa2.37□□□□□ -2.03
PHD1YKL043W MIG3P39943 394 aa2.37□□□□□ -2.03
PHD1YKL043W GAT4P40569 121 aa2.37□□□□□ -2.03
PHD1YKL043W ECO1P43605 281 aa2.37□□□□□ -2.03
PHD1YKL043W YGR219WP53307 113 aa2.37□□□□□ -2.03
PHD1YKL043W TIM10P87108 93 aa2.37□□□□□ -2.03
PHD1YKL043W RGM1Q00453 211 aa2.37□□□□□ -2.03
PHD1YKL043W YDR246W-AQ3E763 66 aa2.37□□□□□ -2.03
PHD1YKL043W YDR182W-AQ3E796 67 aa2.37□□□□□ -2.03
PHD1YKL043W YOR020W-AQ3E824 90 aa2.37□□□□□ -2.03
PHD1YKL043W SPS100P13130 326 aa2.36□□□□□ -2.03
PHD1YKL043W MRPL39P36533 70 aa2.36□□□□□ -2.03
PHD1YKL043W HUA1P40325 198 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms