RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC16YKL022C BNI1P41832 1953 aa4.1□□□□□ -1.75
CDC16YKL022C RPA190P10964 1664 aaKnown RBP4.1□□□□□ -1.75
CDC16YKL022C YLR194CQ05777 254 aa4.1□□□□□ -1.75
CDC16YKL022C CHC1P22137 1653 aaKnown RBP4.09□□□□□ -1.75
CDC16YKL022C EMC5P40540 141 aa4.09□□□□□ -1.75
CDC16YKL022C PCC1Q3E833 88 aa4.09□□□□□ -1.75
CDC16YKL022C VMA21P41806 77 aa4.09□□□□□ -1.76
CDC16YKL022C YLR296WQ05898 108 aa4.09□□□□□ -1.76
CDC16YKL022C MHF1Q3E835 90 aa4.09□□□□□ -1.76
CDC16YKL022C SNF2P22082 1703 aa4.08□□□□□ -1.76
CDC16YKL022C HMRA1P0CY11 126 aa4.08□□□□□ -1.76
CDC16YKL022C MSL1P40567 111 aaPredicted RBP4.08□□□□□ -1.76
CDC16YKL022C MIX14Q04341 121 aa4.07□□□□□ -1.76
CDC16YKL022C SEN15Q04675 128 aa4.07□□□□□ -1.76
CDC16YKL022C YDL012CQ12489 107 aa4.07□□□□□ -1.76
CDC16YKL022C FLO9P39712 1322 aa4.07□□□□□ -1.76
CDC16YKL022C YSP2Q06681 1438 aa4.07□□□□□ -1.76
CDC16YKL022C PAU19P0CE85 124 aa4.07□□□□□ -1.76
CDC16YKL022C PAU3P25610 124 aa4.07□□□□□ -1.76
CDC16YKL022C YIR020CP40575 100 aa4.07□□□□□ -1.76
CDC16YKL022C DAN1P47178 298 aa4.07□□□□□ -1.76
CDC16YKL022C RSM19P53733 91 aaPredicted RBP4.07□□□□□ -1.76
CDC16YKL022C TAR1Q8TGM6 124 aa4.07□□□□□ -1.76
CDC16YKL022C RPL36BO14455 100 aaKnown RBP4.06□□□□□ -1.76
CDC16YKL022C RPL36AP05745 100 aaPredicted RBP4.06□□□□□ -1.76
CDC16YKL022C ATG8P38182 117 aaRIP-Chip data4.06□□□□□ -1.76not detected
CDC16YKL022C SNN1P48232 102 aa4.06□□□□□ -1.76
CDC16YKL022C RRT15Q3E811 62 aa4.06□□□□□ -1.76
CDC16YKL022C YJL197C-AP0C5P0 93 aa4.06□□□□□ -1.76
CDC16YKL022C YPR096CO13587 100 aa4.05□□□□□ -1.76
CDC16YKL022C RPL13BP40212 199 aaKnown RBP4.05□□□□□ -1.76
CDC16YKL022C QCR8P08525 94 aa4.05□□□□□ -1.76
CDC16YKL022C RPL22BP56628 122 aaKnown RBP4.05□□□□□ -1.76
CDC16YKL022C YMR082CQ04276 118 aa4.05□□□□□ -1.76
CDC16YKL022C HRT1Q08273 121 aa4.04□□□□□ -1.76
CDC16YKL022C SEC7P11075 2009 aaKnown RBP4.04□□□□□ -1.76
CDC16YKL022C NUP192P47054 1683 aa4.04□□□□□ -1.76
CDC16YKL022C COX23P38824 151 aa4.04□□□□□ -1.76
CDC16YKL022C YEL008WP40001 126 aa4.04□□□□□ -1.76
CDC16YKL022C PRM7Q12459 698 aa4.03□□□□□ -1.76
CDC16YKL022C HAP1P0CE41 1502 aa4.03□□□□□ -1.76
CDC16YKL022C VMR1P38735 1592 aa4.02□□□□□ -1.77
CDC16YKL022C HPA2Q06592 156 aa4.02□□□□□ -1.77
CDC16YKL022C YHR213WP0CI67 198 aa4.01□□□□□ -1.77
CDC16YKL022C SRX1P36077 127 aa4.01□□□□□ -1.77
CDC16YKL022C IML1P47170 1584 aa4.01□□□□□ -1.77
CDC16YKL022C YRF1-1P0CX20 1796 aa4.01□□□□□ -1.77
CDC16YKL022C YRF1-5P0CX21 1796 aa4.01□□□□□ -1.77
CDC16YKL022C YRF1-8P0CX22 1796 aa4.01□□□□□ -1.77
CDC16YKL022C PAU16P35994 123 aa4□□□□□ -1.77
CDC16YKL022C PAU15P40585 124 aa4□□□□□ -1.77
CDC16YKL022C ECM12O13529 151 aa4□□□□□ -1.77
CDC16YKL022C YGL014C-AP0C5N1 53 aa4□□□□□ -1.77
CDC16YKL022C NUP188P52593 1655 aaKnown RBP3.99□□□□□ -1.77
CDC16YKL022C DNF3Q12674 1656 aa3.99□□□□□ -1.77
CDC16YKL022C YBR027CP38220 110 aa3.98□□□□□ -1.77
CDC16YKL022C CDC39P25655 2108 aaKnown RBP3.97□□□□□ -1.77
CDC16YKL022C RGM1Q00453 211 aa3.97□□□□□ -1.77
CDC16YKL022C YLR162WQ06235 118 aa3.97□□□□□ -1.77
CDC16YKL022C YBR219CP38317 127 aa3.96□□□□□ -1.78
CDC16YKL022C YHR138CP38841 114 aaPredicted RBP3.95□□□□□ -1.78
CDC16YKL022C LST8P41318 303 aa3.95□□□□□ -1.78
CDC16YKL022C SED1Q01589 338 aa3.95□□□□□ -1.78
CDC16YKL022C GSC2P40989 1895 aa3.95□□□□□ -1.78
CDC16YKL022C AIM4P38305 123 aaPredicted RBP3.94□□□□□ -1.78
CDC16YKL022C YHR086W-AQ3E746 53 aa3.94□□□□□ -1.78
CDC16YKL022C USO1P25386 1790 aa3.94□□□□□ -1.78
CDC16YKL022C YDR042CQ03205 200 aa3.94□□□□□ -1.78
CDC16YKL022C HMRA2P0CY13 119 aa3.93□□□□□ -1.78
CDC16YKL022C RPL33AP05744 107 aaKnown RBP3.93□□□□□ -1.78
CDC16YKL022C BCK1Q01389 1478 aa3.92□□□□□ -1.78
CDC16YKL022C ROM2P51862 1356 aaKnown RBP3.92□□□□□ -1.78
CDC16YKL022C POR2P40478 281 aa3.92□□□□□ -1.78
CDC16YKL022C SRB6P32570 121 aa3.92□□□□□ -1.78
CDC16YKL022C YMR122CQ03879 124 aa3.91□□□□□ -1.78
CDC16YKL022C PRM3Q08931 133 aa3.91□□□□□ -1.78
CDC16YKL022C COA3Q3E7B2 85 aa3.91□□□□□ -1.78
CDC16YKL022C PAU5P43575 122 aa3.91□□□□□ -1.78
CDC16YKL022C YLR285C-AQ3E771 56 aa3.91□□□□□ -1.78
CDC16YKL022C YCL042WP25572 119 aa3.9□□□□□ -1.78
CDC16YKL022C NRG2P38082 220 aa3.9□□□□□ -1.78
CDC16YKL022C VAM10Q08474 114 aa3.9□□□□□ -1.78
CDC16YKL022C SUS1Q6WNK7 96 aa3.9□□□□□ -1.78
CDC16YKL022C FAB1P34756 2278 aa3.9□□□□□ -1.78
CDC16YKL022C GIS2P53849 153 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
CDC16YKL022C PFY1P07274 126 aa3.89□□□□□ -1.79
CDC16YKL022C CYB5P40312 120 aa3.89□□□□□ -1.79
CDC16YKL022C GCV3P39726 170 aaPredicted RBP3.88□□□□□ -1.79
CDC16YKL022C CWP2P43497 92 aa3.88□□□□□ -1.79
CDC16YKL022C YLR363W-AQ3E747 85 aa3.88□□□□□ -1.79
CDC16YKL022C YNL146C-AQ3E7Z1 64 aa3.88□□□□□ -1.79
CDC16YKL022C TY1B-NL2Q99337 1749 aaKnown RBP3.87□□□□□ -1.79
CDC16YKL022C YHL005CP38752 130 aa3.86□□□□□ -1.79
CDC16YKL022C APC1P53886 1748 aa3.86□□□□□ -1.79
CDC16YKL022C RPS22AP0C0W1 130 aaKnown RBP3.86□□□□□ -1.79
CDC16YKL022C COA4Q05809 96 aa3.86□□□□□ -1.79
CDC16YKL022C RPL22AP05749 121 aaKnown RBP3.85□□□□□ -1.79
CDC16YKL022C YIL163CP40448 117 aa3.85□□□□□ -1.79
CDC16YKL022C MYO1P08964 1928 aa3.84□□□□□ -1.79
CDC16YKL022C ROX3P25046 220 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms