RNA–Protein interactions for RNA: YJL050W

MTR4, Transcript of ATP-dependent 3'-5' RNA helicase of the DExD/H family, yeast

Gene MTR4, Length 3,222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MTR4	YJL050W	YLR194C	Q05777	254 aa		2.72	□□□□□ -1.97
MTR4	YJL050W	YGR039W	P53225	103 aa		2.71	□□□□□ -1.98
MTR4	YJL050W	RPL42A	P0CX27	106 aa	Known RBP	2.71	□□□□□ -1.98
MTR4	YJL050W	RPL42B	P0CX28	106 aa	Known RBP	2.71	□□□□□ -1.98
MTR4	YJL050W	YKL097C	P34245	136 aa		2.71	□□□□□ -1.98
MTR4	YJL050W	ERG28	P40030	148 aa		2.71	□□□□□ -1.98
MTR4	YJL050W	NCE103	P53615	221 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	KSH1	Q8TGJ3	72 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	TRA1	P38811	3744 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	FAS1	P07149	2051 aa	Known RBP	2.7	□□□□□ -1.98
MTR4	YJL050W	HMRA2	P0CY13	119 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	YCR050C	P25630	102 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	MED6	P38782	295 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	YDR029W	Q12111	104 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	YOR032W-A	Q8TGS1	66 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	RPS16A	P0CX51	143 aa	Known RBP	2.7	□□□□□ -1.98
MTR4	YJL050W	RPS16B	P0CX52	143 aa	Known RBP	2.7	□□□□□ -1.98
MTR4	YJL050W	MPC2	P38857	129 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	YJR146W	P47174	117 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	TDA8	Q6B2U8	126 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	TAO3	P40468	2376 aa		2.7	□□□□□ -1.98
MTR4	YJL050W	DCV1	P43595	202 aa		2.69	□□□□□ -1.98
MTR4	YJL050W	DAD1	Q12248	94 aa		2.69	□□□□□ -1.98
MTR4	YJL050W	YLR236C	A0A023PZG4	107 aa		2.69	□□□□□ -1.98
MTR4	YJL050W	KNH1	P50112	268 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	KTI12	P34253	313 aa	Known RBP	2.68	□□□□□ -1.98
MTR4	YJL050W	YER084W	P40057	128 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	RSM19	P53733	91 aa	Predicted RBP	2.68	□□□□□ -1.98
MTR4	YJL050W	SWS2	P53937	143 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	TRP1	P00912	224 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	HHF1	P02309	103 aa	Known RBP	2.68	□□□□□ -1.98
MTR4	YJL050W	SHU1	P38751	150 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	VHS2	P40463	436 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	GAT3	Q07928	141 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	PPT2	Q12036	173 aa		2.68	□□□□□ -1.98
MTR4	YJL050W	YHR214C-D	P0CX93	97 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	MLF3	P32047	452 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	PEX17	P40155	199 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	HAL1	Q01766	294 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	SDC1	Q03323	175 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	YAL065C	O13511	128 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	YSY6	P38374	65 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	YGR219W	P53307	113 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	COF1	Q03048	143 aa	Known RBP	2.67	□□□□□ -1.98
MTR4	YJL050W	YOR029W	Q12243	111 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	YDR034W-B	Q6Q5X2	51 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	TOM1	Q03280	3268 aa		2.67	□□□□□ -1.98
MTR4	YJL050W	DIF1	O13577	133 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	DSE2	P38844	325 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	URM1	P40554	99 aa	Predicted RBP	2.66	□□□□□ -1.98
MTR4	YJL050W	GLO1	P50107	326 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	YMR105W-A	Q8TGS8	64 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	MRPL39	P36533	70 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	YHR022C	P38763	256 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	RRT13	P40042	185 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	CCW12	Q12127	133 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	YOR008C-A	Q3E7B9	74 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	YER187W	P40102	141 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	REE1	P40893	198 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	SRL1	Q08673	210 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	PRM7	Q12459	698 aa		2.66	□□□□□ -1.98
MTR4	YJL050W	YNL194C	P40169	301 aa		2.65	□□□□□ -1.98
MTR4	YJL050W	ARC15	P40518	154 aa	RIP-Chip data	2.65	□□□□□ -1.99	not detected
MTR4	YJL050W	ATP23	P53722	227 aa		2.65	□□□□□ -1.99
MTR4	YJL050W	RPL15B	P54780	204 aa	Predicted RBP	2.65	□□□□□ -1.99
MTR4	YJL050W	PBI2	P0CT04	75 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	RPL16B	P26785	198 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	RGM1	Q00453	211 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	YMR181C	Q03231	154 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	PBP4	Q07362	185 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	YOL160W	Q08321	113 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	RPS14A	P06367	137 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	QCR8	P08525	94 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	RPL18A	P0CX49	186 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	RPL18B	P0CX50	186 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	RPL16A	P26784	199 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	RPS14B	P39516	138 aa	Known RBP	2.64	□□□□□ -1.99
MTR4	YJL050W	YNL190W	P53872	204 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	RNH203	Q12338	110 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	YBR200W-A	Q3E755	54 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	YNL277W-A	Q3E7Z0	62 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	YLR162W	Q06235	118 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	YDR182W-A	Q3E796	67 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	YGR121W-A	Q3E816	71 aa		2.64	□□□□□ -1.99
MTR4	YJL050W	ATP15	P21306	62 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	YML122C	Q03207	126 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	YPR117W	Q06116	2489 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	SPS100	P13130	326 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	RRT1	P38192	103 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	SFT1	P43682	97 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	PIR5	P46999	287 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	YOL166W-A	Q8TGJ1	51 aa		2.63	□□□□□ -1.99
MTR4	YJL050W	RPL28	P02406	149 aa	Known RBP	2.62	□□□□□ -1.99
MTR4	YJL050W	YHL037C	P38733	133 aa		2.62	□□□□□ -1.99
MTR4	YJL050W	BEM2	P39960	2167 aa	Known RBP	2.62	□□□□□ -1.99
MTR4	YJL050W	YOR020W-A	Q3E824	90 aa		2.62	□□□□□ -1.99
MTR4	YJL050W	SIP18	P50263	79 aa		2.62	□□□□□ -1.99
MTR4	YJL050W	SPG4	Q04438	115 aa		2.62	□□□□□ -1.99
MTR4	YJL050W	YDR114C	Q04597	100 aa		2.62	□□□□□ -1.99
MTR4	YJL050W	BRR2	P32639	2163 aa	Known RBP	2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms