RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YBR121C-AP0C5L4 52 aa2.19□□□□□ -2.06
SDS3YIL084C QCR9P22289 66 aa2.19□□□□□ -2.06
SDS3YIL084C AHT1P29589 182 aa2.19□□□□□ -2.06
SDS3YIL084C YBR013CP38215 129 aa2.19□□□□□ -2.06
SDS3YIL084C YBR090CP38253 122 aa2.19□□□□□ -2.06
SDS3YIL084C VTC1P40046 129 aaRIP-Chip data2.19□□□□□ -2.06not detected
SDS3YIL084C YIL163CP40448 117 aa2.19□□□□□ -2.06
SDS3YIL084C PMP3P87284 55 aa2.19□□□□□ -2.06
SDS3YIL084C DCN1Q12395 269 aa2.19□□□□□ -2.06
SDS3YIL084C PCC1Q3E833 88 aa2.19□□□□□ -2.06
SDS3YIL084C YPR010C-AA5Z2X5 72 aa2.18□□□□□ -2.06
SDS3YIL084C SEC59P20048 519 aa2.18□□□□□ -2.06
SDS3YIL084C YBR209WP38311 105 aa2.18□□□□□ -2.06
SDS3YIL084C YBR242WP38331 238 aa2.18□□□□□ -2.06
SDS3YIL084C YHR173CP38864 112 aa2.18□□□□□ -2.06
SDS3YIL084C YEA4P40004 342 aa2.18□□□□□ -2.06
SDS3YIL084C AIM19P40502 157 aa2.18□□□□□ -2.06
SDS3YIL084C YGL149WP53116 101 aa2.18□□□□□ -2.06
SDS3YIL084C ERI1P62651 68 aaKnown RBP2.18□□□□□ -2.06
SDS3YIL084C CYT2Q00873 224 aa2.18□□□□□ -2.06
SDS3YIL084C UPS3Q04006 179 aa2.18□□□□□ -2.06
SDS3YIL084C YOR015WQ12169 119 aa2.18□□□□□ -2.06
SDS3YIL084C YMR122W-AQ3E842 84 aa2.18□□□□□ -2.06
SDS3YIL084C FZF1P32805 299 aa2.17□□□□□ -2.06
SDS3YIL084C YLR342W-AQ3E810 57 aa2.17□□□□□ -2.06
SDS3YIL084C UBC5P15732 148 aa2.16□□□□□ -2.06
SDS3YIL084C DSE2P38844 325 aa2.16□□□□□ -2.06
SDS3YIL084C ERG28P40030 148 aa2.16□□□□□ -2.06
SDS3YIL084C CIN5P40917 295 aa2.16□□□□□ -2.06
SDS3YIL084C YKL183C-AQ3E765 70 aa2.16□□□□□ -2.06
SDS3YIL084C YDR157WA0A023PZE8 133 aa2.15□□□□□ -2.07
SDS3YIL084C AME1P38313 324 aa2.15□□□□□ -2.07
SDS3YIL084C YLR194CQ05777 254 aa2.15□□□□□ -2.07
SDS3YIL084C APS1P35181 156 aa2.14□□□□□ -2.07
SDS3YIL084C YER076CP40049 302 aa2.14□□□□□ -2.07
SDS3YIL084C TDA8Q6B2U8 126 aa2.13□□□□□ -2.07
SDS3YIL084C YLR156WP0CE96 114 aa2.12□□□□□ -2.07
SDS3YIL084C YLR159WP0CE97 114 aa2.12□□□□□ -2.07
SDS3YIL084C YLR161WP0CE98 114 aa2.12□□□□□ -2.07
SDS3YIL084C UTP11P34247 250 aaPredicted RBP2.12□□□□□ -2.07
SDS3YIL084C RPL27AP0C2H6 136 aaKnown RBP2.11□□□□□ -2.07
SDS3YIL084C RPL27BP0C2H7 136 aaKnown RBP2.11□□□□□ -2.07
SDS3YIL084C CKS1P20486 150 aaKnown RBP2.11□□□□□ -2.07
SDS3YIL084C YHR140WP38842 239 aa2.11□□□□□ -2.07
SDS3YIL084C TVP18Q04767 167 aa2.11□□□□□ -2.07
SDS3YIL084C YOR105WQ08504 108 aa2.11□□□□□ -2.07
SDS3YIL084C YGL194C-AQ2V2P6 80 aa2.11□□□□□ -2.07
SDS3YIL084C CMC2Q3E7A4 109 aa2.11□□□□□ -2.07
SDS3YIL084C KTI11Q3E840 82 aa2.11□□□□□ -2.07
SDS3YIL084C ECM12O13529 151 aa2.1□□□□□ -2.07
SDS3YIL084C MRPL31P14063 131 aaPredicted RBP2.1□□□□□ -2.07
SDS3YIL084C MAG1P22134 296 aaKnown RBP2.1□□□□□ -2.07
SDS3YIL084C RPB11P38902 120 aa2.1□□□□□ -2.07
SDS3YIL084C SEC72P39742 193 aaKnown RBP2.1□□□□□ -2.07
SDS3YIL084C RPC10P40422 70 aa2.1□□□□□ -2.07
SDS3YIL084C CWP2P43497 92 aa2.1□□□□□ -2.07
SDS3YIL084C DCV1P43595 202 aa2.1□□□□□ -2.07
SDS3YIL084C TSC3Q3E790 80 aa2.1□□□□□ -2.07
SDS3YIL084C CMC4Q3E7A9 73 aa2.1□□□□□ -2.07
SDS3YIL084C UBI4P0CG63 381 aaKnown RBP2.09□□□□□ -2.07
SDS3YIL084C YBR292CP38357 123 aa2.09□□□□□ -2.07
SDS3YIL084C THG1P53215 237 aaKnown RBP2.09□□□□□ -2.07
SDS3YIL084C YCL001W-AP87012 153 aa2.09□□□□□ -2.07
SDS3YIL084C UBC4P15731 148 aa2.08□□□□□ -2.08
SDS3YIL084C MRP49P32388 137 aa2.08□□□□□ -2.08
SDS3YIL084C ACP1P32463 125 aa2.08□□□□□ -2.08
SDS3YIL084C YBR219CP38317 127 aa2.08□□□□□ -2.08
SDS3YIL084C PAU4P53427 120 aa2.08□□□□□ -2.08
SDS3YIL084C GPI19Q04082 140 aa2.08□□□□□ -2.08
SDS3YIL084C GIM5Q04493 163 aa2.08□□□□□ -2.08
SDS3YIL084C ANT1Q06497 328 aa2.08□□□□□ -2.08
SDS3YIL084C NAT3Q06504 195 aa2.08□□□□□ -2.08
SDS3YIL084C YCL001W-BQ96VH2 84 aa2.08□□□□□ -2.08
SDS3YIL084C ENV10Q99382 181 aa2.07□□□□□ -2.08
SDS3YIL084C PAU1P0CE88 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU14P0CE89 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU6P0CE90 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU18P0CE91 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU8P0CE92 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU11P0CE93 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU13P38725 120 aa2.06□□□□□ -2.08
SDS3YIL084C JAC1P53193 184 aa2.06□□□□□ -2.08
SDS3YIL084C ATP19P81451 68 aa2.06□□□□□ -2.08
SDS3YIL084C PAU10Q03050 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU20Q08322 120 aa2.06□□□□□ -2.08
SDS3YIL084C PAU9Q3E770 120 aa2.06□□□□□ -2.08
SDS3YIL084C SEC4P07560 215 aaKnown RBP2.05□□□□□ -2.08
SDS3YIL084C RPS22AP0C0W1 130 aaKnown RBP2.05□□□□□ -2.08
SDS3YIL084C VMA7P39111 118 aa2.05□□□□□ -2.08
SDS3YIL084C GCV3P39726 170 aaPredicted RBP2.05□□□□□ -2.08
SDS3YIL084C CYB5P40312 120 aa2.05□□□□□ -2.08
SDS3YIL084C YLR118CQ12354 227 aa2.05□□□□□ -2.08
SDS3YIL084C Q0032Q9ZZX7 96 aa2.05□□□□□ -2.08
SDS3YIL084C BET1P22804 142 aa2.04□□□□□ -2.08
SDS3YIL084C YEL008WP40001 126 aa2.04□□□□□ -2.08
SDS3YIL084C YGL041C-BQ3E750 60 aa2.04□□□□□ -2.08
SDS3YIL084C SRP14P38985 146 aa2.03□□□□□ -2.08
SDS3YIL084C YMR295CQ03559 197 aa2.03□□□□□ -2.08
SDS3YIL084C COX19Q3E731 98 aa2.03□□□□□ -2.08
SDS3YIL084C YMR175W-AQ3E766 64 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms