RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W CDC39P25655 2108 aaKnown RBP1.85□□□□□ -2.11
CTM1YHR109W RTC6O14464 93 aa1.85□□□□□ -2.11
CTM1YHR109W PAU19P0CE85 124 aa1.85□□□□□ -2.11
CTM1YHR109W YHR213WP0CI67 198 aa1.85□□□□□ -2.11
CTM1YHR109W PAU3P25610 124 aa1.85□□□□□ -2.11
CTM1YHR109W YHL037CP38733 133 aa1.85□□□□□ -2.11
CTM1YHR109W SED1Q01589 338 aa1.85□□□□□ -2.11
CTM1YHR109W PRM3Q08931 133 aa1.85□□□□□ -2.11
CTM1YHR109W MHF1Q3E835 90 aa1.85□□□□□ -2.11
CTM1YHR109W HAP1P0CE41 1502 aa1.84□□□□□ -2.11
CTM1YHR109W DAD1Q12248 94 aa1.84□□□□□ -2.12
CTM1YHR109W YMR175W-AQ3E766 64 aa1.84□□□□□ -2.12
CTM1YHR109W SWR1Q05471 1514 aa1.84□□□□□ -2.12
CTM1YHR109W YHR138CP38841 114 aaPredicted RBP1.83□□□□□ -2.12
CTM1YHR109W HSP10P38910 106 aa1.83□□□□□ -2.12
CTM1YHR109W YGL149WP53116 101 aa1.83□□□□□ -2.12
CTM1YHR109W YIL014C-AQ02598 104 aa1.83□□□□□ -2.12
CTM1YHR109W DNA2P38859 1522 aa1.83□□□□□ -2.12
CTM1YHR109W ROM2P51862 1356 aaKnown RBP1.83□□□□□ -2.12
CTM1YHR109W PAI3P01094 68 aa1.82□□□□□ -2.12
CTM1YHR109W YGL014C-AP0C5N1 53 aa1.82□□□□□ -2.12
CTM1YHR109W RPA12P32529 125 aaKnown RBP1.82□□□□□ -2.12
CTM1YHR109W SSS1P35179 80 aa1.82□□□□□ -2.12
CTM1YHR109W YIR020CP40575 100 aa1.82□□□□□ -2.12
CTM1YHR109W YLR363W-AQ3E747 85 aa1.82□□□□□ -2.12
CTM1YHR109W SUS1Q6WNK7 96 aa1.82□□□□□ -2.12
CTM1YHR109W ENV10Q99382 181 aa1.82□□□□□ -2.12
CTM1YHR109W ACC1Q00955 2233 aaKnown RBP1.82□□□□□ -2.12
CTM1YHR109W MLP1Q02455 1875 aaKnown RBP1.82□□□□□ -2.12
CTM1YHR109W TCB3Q03640 1545 aaKnown RBP1.82□□□□□ -2.12
CTM1YHR109W VMA21P41806 77 aa1.82□□□□□ -2.12
CTM1YHR109W PCC1Q3E833 88 aa1.82□□□□□ -2.12
CTM1YHR109W OST5Q92316 86 aa1.82□□□□□ -2.12
CTM1YHR109W XRN1P22147 1528 aaKnown RBP1.81□□□□□ -2.12
CTM1YHR109W SIN3P22579 1536 aa1.81□□□□□ -2.12
CTM1YHR109W ATG8P38182 117 aaRIP-Chip data1.81□□□□□ -2.12not detected
CTM1YHR109W GCV3P39726 170 aaPredicted RBP1.81□□□□□ -2.12
CTM1YHR109W SNN1P48232 102 aa1.81□□□□□ -2.12
CTM1YHR109W RPL22BP56628 122 aaKnown RBP1.81□□□□□ -2.12
CTM1YHR109W ICY1Q04329 127 aa1.81□□□□□ -2.12
CTM1YHR109W RPL33AP05744 107 aaKnown RBP1.8□□□□□ -2.12
CTM1YHR109W PAU16P35994 123 aa1.8□□□□□ -2.12
CTM1YHR109W COX23P38824 151 aa1.8□□□□□ -2.12
CTM1YHR109W PAU15P40585 124 aa1.8□□□□□ -2.12
CTM1YHR109W LST8P41318 303 aa1.8□□□□□ -2.12
CTM1YHR109W PAU5P43575 122 aa1.8□□□□□ -2.12
CTM1YHR109W YLR194CQ05777 254 aa1.8□□□□□ -2.12
CTM1YHR109W YDR119W-AQ2V2P9 66 aa1.8□□□□□ -2.12
CTM1YHR109W MMS22Q06164 1454 aa1.8□□□□□ -2.12
CTM1YHR109W YOL131WQ08270 108 aa1.8□□□□□ -2.12
CTM1YHR109W SRB8P25648 1427 aa1.79□□□□□ -2.12
CTM1YHR109W GDB1Q06625 1536 aa1.79□□□□□ -2.12
CTM1YHR109W RSM18P40033 138 aa1.79□□□□□ -2.12
CTM1YHR109W ICS3P47034 131 aa1.79□□□□□ -2.12
CTM1YHR109W MON2P48563 1636 aaPredicted RBP1.79□□□□□ -2.12
CTM1YHR109W ESP1Q03018 1630 aa1.79□□□□□ -2.12
CTM1YHR109W RPS22AP0C0W1 130 aaKnown RBP1.78□□□□□ -2.12
CTM1YHR109W IMP2P46972 177 aa1.78□□□□□ -2.12
CTM1YHR109W YMR122CQ03879 124 aa1.78□□□□□ -2.12
CTM1YHR109W YPR145C-AQ2V2P0 78 aa1.78□□□□□ -2.12
CTM1YHR109W ECM29P38737 1868 aa1.78□□□□□ -2.12
CTM1YHR109W POL1P13382 1468 aa1.78□□□□□ -2.13
CTM1YHR109W YJL197C-AP0C5P0 93 aa1.77□□□□□ -2.13
CTM1YHR109W TOM6P33448 61 aa1.77□□□□□ -2.13
CTM1YHR109W SRX1P36077 127 aa1.77□□□□□ -2.13
CTM1YHR109W SMC4Q12267 1418 aa1.77□□□□□ -2.13
CTM1YHR109W DOP1Q03921 1698 aa1.77□□□□□ -2.13
CTM1YHR109W MMS1Q06211 1407 aa1.77□□□□□ -2.13
CTM1YHR109W ROX3P25046 220 aa1.77□□□□□ -2.13
CTM1YHR109W RPS22BQ3E7Y3 130 aaKnown RBP1.77□□□□□ -2.13
CTM1YHR109W YIL134C-AQ45U18 67 aa1.77□□□□□ -2.13
CTM1YHR109W YLR419WQ06698 1435 aaKnown RBP1.76□□□□□ -2.13
CTM1YHR109W YBR292CP38357 123 aa1.76□□□□□ -2.13
CTM1YHR109W ATX1P38636 73 aa1.76□□□□□ -2.13
CTM1YHR109W YHL005CP38752 130 aa1.76□□□□□ -2.13
CTM1YHR109W SWM2P40342 146 aa1.76□□□□□ -2.13
CTM1YHR109W IQG1Q12280 1495 aa1.76□□□□□ -2.13
CTM1YHR109W RPL36BO14455 100 aaKnown RBP1.75□□□□□ -2.13
CTM1YHR109W RPL36AP05745 100 aaPredicted RBP1.75□□□□□ -2.13
CTM1YHR109W HMRA2P0CY13 119 aa1.75□□□□□ -2.13
CTM1YHR109W NHP2P32495 156 aaPredicted RBP1.75□□□□□ -2.13
CTM1YHR109W BPH1P25356 2167 aa1.75□□□□□ -2.13
CTM1YHR109W RPL22AP05749 121 aaKnown RBP1.75□□□□□ -2.13
CTM1YHR109W AIM4P38305 123 aaPredicted RBP1.75□□□□□ -2.13
CTM1YHR109W YNL198CP40166 100 aa1.75□□□□□ -2.13
CTM1YHR109W MIC27P50945 234 aa1.75□□□□□ -2.13
CTM1YHR109W YDR381C-AQ3E6R5 114 aa1.75□□□□□ -2.13
CTM1YHR109W MYO4P32492 1471 aa1.74□□□□□ -2.13
CTM1YHR109W RRP5Q05022 1729 aaKnown RBP1.74□□□□□ -2.13
CTM1YHR109W DNF1P32660 1571 aa1.74□□□□□ -2.13
CTM1YHR109W HPA2Q06592 156 aa1.74□□□□□ -2.13
CTM1YHR109W PFY1P07274 126 aa1.73□□□□□ -2.13
CTM1YHR109W SPC1P46965 94 aa1.73□□□□□ -2.13
CTM1YHR109W YNL122CP53921 115 aaPredicted RBP1.73□□□□□ -2.13
CTM1YHR109W PAU23Q07987 124 aa1.73□□□□□ -2.13
CTM1YHR109W PAU17Q12370 124 aa1.73□□□□□ -2.13
CTM1YHR109W YLR285C-AQ3E771 56 aa1.73□□□□□ -2.13
CTM1YHR109W YNR034W-AQ3E841 98 aa1.73□□□□□ -2.13
CTM1YHR109W YCF1P39109 1515 aaKnown RBP1.73□□□□□ -2.13
CTM1YHR109W PDR12Q02785 1511 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms