RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C HSP150P32478 413 aa4.33□□□□□ -1.72
SHO1YER118C EMC5P40540 141 aa4.33□□□□□ -1.72
SHO1YER118C MET31Q03081 177 aa4.33□□□□□ -1.72
SHO1YER118C APC1P53886 1748 aa4.32□□□□□ -1.72
SHO1YER118C SOD1P00445 154 aaKnown RBP4.32□□□□□ -1.72
SHO1YER118C HMRA1P0CY11 126 aa4.32□□□□□ -1.72
SHO1YER118C RPL13BP40212 199 aaKnown RBP4.32□□□□□ -1.72
SHO1YER118C MSL1P40567 111 aaPredicted RBP4.32□□□□□ -1.72
SHO1YER118C SML1Q04964 104 aa4.32□□□□□ -1.72
SHO1YER118C OST5Q92316 86 aa4.32□□□□□ -1.72
SHO1YER118C PAU2P32612 120 aa4.31□□□□□ -1.72
SHO1YER118C MIX14Q04341 121 aa4.31□□□□□ -1.72
SHO1YER118C AVO2Q04749 426 aa4.31□□□□□ -1.72
SHO1YER118C RTC6O14464 93 aa4.3□□□□□ -1.72
SHO1YER118C YHR007C-AQ07074 71 aa4.3□□□□□ -1.72
SHO1YER118C RPB7P34087 171 aa4.29□□□□□ -1.72
SHO1YER118C YMR082CQ04276 118 aa4.29□□□□□ -1.72
SHO1YER118C YLR296WQ05898 108 aa4.29□□□□□ -1.72
SHO1YER118C TY4B-HP0C2J7 1802 aa4.29□□□□□ -1.72
SHO1YER118C TY4B-JP47024 1803 aa4.29□□□□□ -1.72
SHO1YER118C YRF1-2P40105 1681 aa4.29□□□□□ -1.72
SHO1YER118C SEN15Q04675 128 aa4.28□□□□□ -1.72
SHO1YER118C ECM12O13529 151 aa4.27□□□□□ -1.73
SHO1YER118C YKR045CP36138 183 aa4.27□□□□□ -1.73
SHO1YER118C DSE2P38844 325 aa4.27□□□□□ -1.73
SHO1YER118C RSM19P53733 91 aaPredicted RBP4.27□□□□□ -1.73
SHO1YER118C RPL36BO14455 100 aaKnown RBP4.26□□□□□ -1.73
SHO1YER118C RPL36AP05745 100 aaPredicted RBP4.26□□□□□ -1.73
SHO1YER118C FPR1P20081 114 aaKnown RBP4.26□□□□□ -1.73
SHO1YER118C PAU24P38155 120 aa4.26□□□□□ -1.73
SHO1YER118C ATG8P38182 117 aaRIP-Chip data4.26□□□□□ -1.73not detected
SHO1YER118C RPL22BP56628 122 aaKnown RBP4.26□□□□□ -1.73
SHO1YER118C YIL014C-AQ02598 104 aa4.26□□□□□ -1.73
SHO1YER118C PCC1Q3E833 88 aa4.26□□□□□ -1.73
SHO1YER118C MHF1Q3E835 90 aa4.26□□□□□ -1.73
SHO1YER118C YJL197C-AP0C5P0 93 aa4.25□□□□□ -1.73
SHO1YER118C SNN1P48232 102 aa4.25□□□□□ -1.73
SHO1YER118C RRP5Q05022 1729 aaKnown RBP4.25□□□□□ -1.73
SHO1YER118C YLR194CQ05777 254 aa4.25□□□□□ -1.73
SHO1YER118C FAS1P07149 2051 aaKnown RBP4.25□□□□□ -1.73
SHO1YER118C PAU19P0CE85 124 aa4.24□□□□□ -1.73
SHO1YER118C PAU3P25610 124 aa4.24□□□□□ -1.73
SHO1YER118C FMT1P32785 401 aa4.24□□□□□ -1.73
SHO1YER118C SRB6P32570 121 aa4.23□□□□□ -1.73
SHO1YER118C HRT1Q08273 121 aa4.23□□□□□ -1.73
SHO1YER118C RRT15Q3E811 62 aa4.23□□□□□ -1.73
SHO1YER118C URB1P34241 1764 aaKnown RBP4.22□□□□□ -1.73
SHO1YER118C YHR138CP38841 114 aaPredicted RBP4.22□□□□□ -1.73
SHO1YER118C FKS3Q04952 1785 aa4.22□□□□□ -1.73
SHO1YER118C QCR8P08525 94 aa4.21□□□□□ -1.74
SHO1YER118C YIR020CP40575 100 aa4.21□□□□□ -1.74
SHO1YER118C HPA2Q06592 156 aa4.21□□□□□ -1.74
SHO1YER118C PAU16P35994 123 aa4.19□□□□□ -1.74
SHO1YER118C SRX1P36077 127 aa4.19□□□□□ -1.74
SHO1YER118C COX23P38824 151 aa4.19□□□□□ -1.74
SHO1YER118C PAU15P40585 124 aa4.19□□□□□ -1.74
SHO1YER118C ROM2P51862 1356 aaKnown RBP4.18□□□□□ -1.74
SHO1YER118C SUS1Q6WNK7 96 aa4.18□□□□□ -1.74
SHO1YER118C TAR1Q8TGM6 124 aa4.17□□□□□ -1.74
SHO1YER118C YPR096CO13587 100 aa4.16□□□□□ -1.74
SHO1YER118C YHR213WP0CI67 198 aa4.16□□□□□ -1.74
SHO1YER118C NRG2P38082 220 aa4.16□□□□□ -1.74
SHO1YER118C CYB5P40312 120 aa4.16□□□□□ -1.74
SHO1YER118C DAN1P47178 298 aa4.16□□□□□ -1.74
SHO1YER118C RGM1Q00453 211 aa4.16□□□□□ -1.74
SHO1YER118C YDR042CQ03205 200 aa4.16□□□□□ -1.74
SHO1YER118C FLO9P39712 1322 aa4.16□□□□□ -1.74
SHO1YER118C MIX17Q03667 156 aa4.15□□□□□ -1.75
SHO1YER118C YLR363W-AQ3E747 85 aa4.15□□□□□ -1.75
SHO1YER118C YBR027CP38220 110 aa4.14□□□□□ -1.75
SHO1YER118C CWP2P43497 92 aa4.14□□□□□ -1.75
SHO1YER118C YGL014C-AP0C5N1 53 aa4.13□□□□□ -1.75
SHO1YER118C YHL005CP38752 130 aa4.12□□□□□ -1.75
SHO1YER118C RIF1P29539 1916 aa4.11□□□□□ -1.75
SHO1YER118C GCV3P39726 170 aaPredicted RBP4.1□□□□□ -1.75
SHO1YER118C YEL008WP40001 126 aa4.1□□□□□ -1.75
SHO1YER118C POR2P40478 281 aa4.1□□□□□ -1.75
SHO1YER118C LST8P41318 303 aa4.1□□□□□ -1.75
SHO1YER118C PFY1P07274 126 aa4.09□□□□□ -1.75
SHO1YER118C HMRA2P0CY13 119 aa4.09□□□□□ -1.75
SHO1YER118C RSM18P40033 138 aa4.09□□□□□ -1.75
SHO1YER118C SED1Q01589 338 aa4.09□□□□□ -1.75
SHO1YER118C PAU5P43575 122 aa4.08□□□□□ -1.76
SHO1YER118C PRM7Q12459 698 aa4.08□□□□□ -1.76
SHO1YER118C RPL33AP05744 107 aaKnown RBP4.07□□□□□ -1.76
SHO1YER118C GSC2P40989 1895 aa4.07□□□□□ -1.76
SHO1YER118C YMR122CQ03879 124 aa4.06□□□□□ -1.76
SHO1YER118C RIM15P43565 1770 aa4.05□□□□□ -1.76
SHO1YER118C YCR085WP25650 117 aa4.05□□□□□ -1.76
SHO1YER118C AIM4P38305 123 aaPredicted RBP4.05□□□□□ -1.76
SHO1YER118C VAM10Q08474 114 aa4.05□□□□□ -1.76
SHO1YER118C YLR285C-AQ3E771 56 aa4.05□□□□□ -1.76
SHO1YER118C ENV10Q99382 181 aa4.05□□□□□ -1.76
SHO1YER118C ICY1Q04329 127 aa4.04□□□□□ -1.76
SHO1YER118C YLR162WQ06235 118 aa4.04□□□□□ -1.76
SHO1YER118C PRM3Q08931 133 aa4.04□□□□□ -1.76
SHO1YER118C YDL012CQ12489 107 aa4.04□□□□□ -1.76
SHO1YER118C RPL22AP05749 121 aaKnown RBP4.03□□□□□ -1.76
SHO1YER118C RPS22AP0C0W1 130 aaKnown RBP4.03□□□□□ -1.76
SHO1YER118C ROX3P25046 220 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms