RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C YCR101CP25607 182 aa1.69□□□□□ -2.14
RTN1YDR233C LSM1P47017 172 aaKnown RBP1.69□□□□□ -2.14
RTN1YDR233C YGR042WP53227 271 aa1.69□□□□□ -2.14
RTN1YDR233C SCS22Q6Q595 175 aa1.69□□□□□ -2.14
RTN1YDR233C PRP8P33334 2413 aaKnown RBP1.69□□□□□ -2.14
RTN1YDR233C MEC1P38111 2368 aa1.68□□□□□ -2.14
RTN1YDR233C RPL39P04650 51 aa1.68□□□□□ -2.14
RTN1YDR233C YOL013W-AP0C272 63 aaPredicted RBP1.68□□□□□ -2.14
RTN1YDR233C PET54P10834 293 aa1.68□□□□□ -2.14
RTN1YDR233C ECM31P38122 312 aa1.68□□□□□ -2.14
RTN1YDR233C ATG8P38182 117 aaRIP-Chip data1.68□□□□□ -2.14not detected
RTN1YDR233C TMA23Q03525 211 aa1.68□□□□□ -2.14
RTN1YDR233C DIE2P50076 525 aa1.67□□□□□ -2.14
RTN1YDR233C EST3Q03096 181 aa1.67□□□□□ -2.14
RTN1YDR233C RRT7Q07829 113 aa1.67□□□□□ -2.14
RTN1YDR233C VAM10Q08474 114 aa1.67□□□□□ -2.14
RTN1YDR233C SCP1Q08873 200 aa1.67□□□□□ -2.14
RTN1YDR233C YOR385WQ08909 290 aa1.67□□□□□ -2.14
RTN1YDR233C YCR001WP25347 104 aa1.66□□□□□ -2.14
RTN1YDR233C BUD23P25627 275 aaPredicted RBP1.66□□□□□ -2.14
RTN1YDR233C MRP17P28778 131 aa1.66□□□□□ -2.14
RTN1YDR233C SWM2P40342 146 aa1.66□□□□□ -2.14
RTN1YDR233C RTR2Q12378 196 aa1.66□□□□□ -2.14
RTN1YDR233C YCL048W-AQ2V2Q2 79 aa1.66□□□□□ -2.14
RTN1YDR233C Q0297Q9ZZV8 51 aa1.66□□□□□ -2.14
RTN1YDR233C GCN1P33892 2672 aaKnown RBP1.65□□□□□ -2.14
RTN1YDR233C YIR020CP40575 100 aa1.65□□□□□ -2.15
RTN1YDR233C YOL118CQ08259 102 aa1.65□□□□□ -2.15
RTN1YDR233C YOR192C-CQ3E736 78 aa1.65□□□□□ -2.15
RTN1YDR233C YPR108W-AQ3E7B3 70 aa1.65□□□□□ -2.15
RTN1YDR233C YLR365WQ7LIF2 110 aa1.65□□□□□ -2.15
RTN1YDR233C YMR105W-AQ8TGS8 64 aa1.65□□□□□ -2.15
RTN1YDR233C CSF1Q12150 2958 aa1.65□□□□□ -2.15
RTN1YDR233C YHR138CP38841 114 aaPredicted RBP1.64□□□□□ -2.15
RTN1YDR233C YER137CP40083 148 aaKnown RBP1.64□□□□□ -2.15
RTN1YDR233C MOG1P47123 218 aa1.64□□□□□ -2.15
RTN1YDR233C YPR153WQ06537 140 aa1.64□□□□□ -2.15
RTN1YDR233C YLR146W-AQ2V2P1 62 aa1.64□□□□□ -2.15
RTN1YDR233C HUG1Q6Q5K6 68 aa1.64□□□□□ -2.15
RTN1YDR233C ROX3P25046 220 aa1.63□□□□□ -2.15
RTN1YDR233C SRL3P36167 246 aa1.63□□□□□ -2.15
RTN1YDR233C PKR1Q03880 122 aaKnown RBP1.63□□□□□ -2.15
RTN1YDR233C RAV2Q03956 351 aa1.63□□□□□ -2.15
RTN1YDR233C YMR090WQ04304 227 aaKnown RBP1.63□□□□□ -2.15
RTN1YDR233C YOR097CQ12274 175 aaPredicted RBP1.63□□□□□ -2.15
RTN1YDR233C YOS1Q3E834 85 aa1.63□□□□□ -2.15
RTN1YDR233C CCW14O13547 238 aa1.62□□□□□ -2.15
RTN1YDR233C HSP12P22943 109 aaKnown RBP1.62□□□□□ -2.15
RTN1YDR233C HYP2P23301 157 aaKnown RBP1.62□□□□□ -2.15
RTN1YDR233C SUA7P29055 345 aaPredicted RBP1.62□□□□□ -2.15
RTN1YDR233C ATP19P81451 68 aa1.62□□□□□ -2.15
RTN1YDR233C SEN15Q04675 128 aa1.62□□□□□ -2.15
RTN1YDR233C YMR320WQ04897 101 aa1.62□□□□□ -2.15
RTN1YDR233C FCF2Q12035 217 aaPredicted RBP1.62□□□□□ -2.15
RTN1YDR233C NUM1Q00402 2748 aa1.62□□□□□ -2.15
RTN1YDR233C GCV3P39726 170 aaPredicted RBP1.61□□□□□ -2.15
RTN1YDR233C YEA6P39953 335 aa1.61□□□□□ -2.15
RTN1YDR233C GPI2P46961 280 aa1.61□□□□□ -2.15
RTN1YDR233C YGL194C-AQ2V2P6 80 aa1.61□□□□□ -2.15
RTN1YDR233C YGL258W-AQ3E740 77 aa1.61□□□□□ -2.15
RTN1YDR233C COA2Q3E823 68 aa1.61□□□□□ -2.15
RTN1YDR233C YHR213W-AQ8TGT4 77 aa1.61□□□□□ -2.15
RTN1YDR233C ACP1P32463 125 aa1.6□□□□□ -2.15
RTN1YDR233C YBL071CP38185 102 aa1.6□□□□□ -2.15
RTN1YDR233C VMA7P39111 118 aa1.6□□□□□ -2.15
RTN1YDR233C DYN2Q02647 92 aa1.6□□□□□ -2.15
RTN1YDR233C YMR082CQ04276 118 aa1.6□□□□□ -2.15
RTN1YDR233C COA4Q05809 96 aa1.6□□□□□ -2.15
RTN1YDR233C FRQ1Q06389 190 aa1.6□□□□□ -2.15
RTN1YDR233C FMP49A0A023PZB3 126 aa1.59□□□□□ -2.15
RTN1YDR233C QCR9P22289 66 aa1.59□□□□□ -2.15
RTN1YDR233C YBR292CP38357 123 aa1.59□□□□□ -2.15
RTN1YDR233C EMC5P40540 141 aa1.59□□□□□ -2.15
RTN1YDR233C LST8P41318 303 aa1.59□□□□□ -2.15
RTN1YDR233C MIC27P50945 234 aa1.59□□□□□ -2.15
RTN1YDR233C SDH7Q04401 133 aa1.59□□□□□ -2.15
RTN1YDR233C POC4Q12245 148 aaPredicted RBP1.59□□□□□ -2.15
RTN1YDR233C NHP6AP11632 93 aaKnown RBP1.58□□□□□ -2.16
RTN1YDR233C FPR2P32472 135 aa1.58□□□□□ -2.16
RTN1YDR233C EMP24P32803 203 aaKnown RBP1.58□□□□□ -2.16
RTN1YDR233C MRPL38P35996 138 aaPredicted RBP1.58□□□□□ -2.16
RTN1YDR233C YCL001W-AP87012 153 aa1.58□□□□□ -2.16
RTN1YDR233C HOR7Q05827 59 aa1.58□□□□□ -2.16
RTN1YDR233C COX19Q3E731 98 aa1.58□□□□□ -2.16
RTN1YDR233C YGR035W-AQ45U48 73 aa1.58□□□□□ -2.16
RTN1YDR233C SRB6P32570 121 aa1.57□□□□□ -2.16
RTN1YDR233C POR2P40478 281 aa1.57□□□□□ -2.16
RTN1YDR233C VPS55P47111 140 aa1.57□□□□□ -2.16
RTN1YDR233C SNN1P48232 102 aa1.57□□□□□ -2.16
RTN1YDR233C YNL122CP53921 115 aaPredicted RBP1.57□□□□□ -2.16
RTN1YDR233C PRM3Q08931 133 aa1.57□□□□□ -2.16
RTN1YDR233C ATP14Q12349 124 aa1.57□□□□□ -2.16
RTN1YDR233C VMA9Q3E7B6 73 aa1.57□□□□□ -2.16
RTN1YDR233C BLM10P43583 2143 aa1.57□□□□□ -2.16
RTN1YDR233C RPL33AP05744 107 aaKnown RBP1.56□□□□□ -2.16
RTN1YDR233C SEC59P20048 519 aa1.56□□□□□ -2.16
RTN1YDR233C FYV5P25585 152 aa1.56□□□□□ -2.16
RTN1YDR233C SFT2P38166 215 aa1.56□□□□□ -2.16
RTN1YDR233C HHY1P39982 102 aa1.56□□□□□ -2.16
RTN1YDR233C SNU13P39990 126 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms