RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A YOR394C-AQ8TGJ0 55 aa-0.41□□□□□ -2.48
TFB5YDR079C-A UBA3Q99344 299 aa-0.41□□□□□ -2.48
TFB5YDR079C-A YLR462WO13556 202 aa-0.42□□□□□ -2.48
TFB5YDR079C-A POR1P04840 283 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A RPL26AP05743 127 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A YHR032W-AP0C5N6 59 aa-0.42□□□□□ -2.48
TFB5YDR079C-A RPL12AP0CX53 165 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A RPL12BP0CX54 165 aa-0.42□□□□□ -2.48
TFB5YDR079C-A MRPL31P14063 131 aaPredicted RBP-0.42□□□□□ -2.48
TFB5YDR079C-A TPM1P17536 199 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A BET1P22804 142 aa-0.42□□□□□ -2.48
TFB5YDR079C-A CDC10P25342 322 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A FYV5P25585 152 aa-0.42□□□□□ -2.48
TFB5YDR079C-A GSP1P32835 219 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A GSP2P32836 220 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A APS1P35181 156 aa-0.42□□□□□ -2.48
TFB5YDR079C-A RPC25P35718 212 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YBR209WP38311 105 aa-0.42□□□□□ -2.48
TFB5YDR079C-A RPS20P38701 121 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A END3P39013 349 aa-0.42□□□□□ -2.48
TFB5YDR079C-A COX14P39103 70 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YEL014CP39999 101 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YRB2P40517 327 aa-0.42□□□□□ -2.48
TFB5YDR079C-A MET28P40573 187 aa-0.42□□□□□ -2.48
TFB5YDR079C-A FMP32P43557 207 aa-0.42□□□□□ -2.48
TFB5YDR079C-A PAU5P43575 122 aa-0.42□□□□□ -2.48
TFB5YDR079C-A SFT1P43682 97 aa-0.42□□□□□ -2.48
TFB5YDR079C-A OST2P46964 130 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YJR011CP47086 261 aaPredicted RBP-0.42□□□□□ -2.48
TFB5YDR079C-A GPI14P47088 403 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A BXI1P48558 297 aa-0.42□□□□□ -2.48
TFB5YDR079C-A BNS1P50084 137 aa-0.42□□□□□ -2.48
TFB5YDR079C-A USE1P53146 245 aa-0.42□□□□□ -2.48
TFB5YDR079C-A RPL26BP53221 127 aaKnown RBP-0.42□□□□□ -2.48
TFB5YDR079C-A YGR042WP53227 271 aa-0.42□□□□□ -2.48
TFB5YDR079C-A PAU4P53427 120 aa-0.42□□□□□ -2.48
TFB5YDR079C-A VPS75P53853 264 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YML018CQ03730 393 aa-0.42□□□□□ -2.48
TFB5YDR079C-A CUE4Q04201 117 aaPredicted RBP-0.42□□□□□ -2.48
TFB5YDR079C-A SPC2Q04969 178 aa-0.42□□□□□ -2.48
TFB5YDR079C-A ECM19Q06011 112 aa-0.42□□□□□ -2.48
TFB5YDR079C-A PAU20Q08322 120 aa-0.42□□□□□ -2.48
TFB5YDR079C-A DAD1Q12248 94 aa-0.42□□□□□ -2.48
TFB5YDR079C-A SNF8Q12483 233 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YBR230W-AQ3E762 66 aa-0.42□□□□□ -2.48
TFB5YDR079C-A YLL006W-AQ3E814 58 aa-0.42□□□□□ -2.48
TFB5YDR079C-A TDA8Q6B2U8 126 aa-0.42□□□□□ -2.48
TFB5YDR079C-A MIC10Q96VH5 97 aa-0.42□□□□□ -2.48
TFB5YDR079C-A QCR6P00127 147 aa-0.43□□□□□ -2.48
TFB5YDR079C-A MF(ALPHA)1P01149 165 aa-0.43□□□□□ -2.48
TFB5YDR079C-A COX8P04039 78 aa-0.43□□□□□ -2.48
TFB5YDR079C-A COX9P07255 59 aa-0.43□□□□□ -2.48
TFB5YDR079C-A RPS28BP0C0X0 67 aaKnown RBP-0.43□□□□□ -2.48
TFB5YDR079C-A PAU6P0CE90 120 aa-0.43□□□□□ -2.48
TFB5YDR079C-A PAU18P0CE91 120 aa-0.43□□□□□ -2.48
TFB5YDR079C-A MATALPHA2P0CY08 210 aa-0.43□□□□□ -2.48
TFB5YDR079C-A HMLALPHA2P0CY09 210 aa-0.43□□□□□ -2.48
TFB5YDR079C-A HMRA2P0CY13 119 aa-0.43□□□□□ -2.48
TFB5YDR079C-A SUI2P20459 304 aaKnown RBP-0.43□□□□□ -2.48
TFB5YDR079C-A YGL010WP25338 174 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YCR051WP25631 222 aa-0.43□□□□□ -2.48
TFB5YDR079C-A RFA3P26755 122 aaKnown RBP-0.43□□□□□ -2.48
TFB5YDR079C-A URA10P30402 227 aa-0.43□□□□□ -2.48
TFB5YDR079C-A NHP2P32495 156 aaPredicted RBP-0.43□□□□□ -2.48
TFB5YDR079C-A VPS24P36095 224 aaKnown RBP-0.43□□□□□ -2.48
TFB5YDR079C-A AIM29P36154 155 aa-0.43□□□□□ -2.48
TFB5YDR079C-A PAU13P38725 120 aa-0.43□□□□□ -2.48
TFB5YDR079C-A FYV4P38783 130 aaPredicted RBP-0.43□□□□□ -2.48
TFB5YDR079C-A IPI1P38803 334 aaPredicted RBP-0.43□□□□□ -2.48
TFB5YDR079C-A RTC3P38804 111 aaPredicted RBP-0.43□□□□□ -2.48
TFB5YDR079C-A YHR122WP38829 231 aa-0.43□□□□□ -2.48
TFB5YDR079C-A NVJ1P38881 321 aa-0.43□□□□□ -2.48
TFB5YDR079C-A VMA7P39111 118 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YEA6P39953 335 aa-0.43□□□□□ -2.48
TFB5YDR079C-A HHY1P39982 102 aa-0.43□□□□□ -2.48
TFB5YDR079C-A SMX2P40204 77 aaKnown RBP-0.43□□□□□ -2.48
TFB5YDR079C-A HPM1P40481 377 aa-0.43□□□□□ -2.48
TFB5YDR079C-A MAM33P40513 266 aa-0.43□□□□□ -2.48
TFB5YDR079C-A GTT1P40582 234 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YGR201CP42936 225 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YAR1P46683 200 aa-0.43□□□□□ -2.48
TFB5YDR079C-A SKI6P46948 246 aaPredicted RBP-0.43□□□□□ -2.48
TFB5YDR079C-A ICS3P47034 131 aa-0.43□□□□□ -2.48
TFB5YDR079C-A UBC12P52491 188 aa-0.43□□□□□ -2.48
TFB5YDR079C-A PRM8P53174 237 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YGR026WP53217 278 aa-0.43□□□□□ -2.48
TFB5YDR079C-A HHO1P53551 258 aa-0.43□□□□□ -2.48
TFB5YDR079C-A OLI1P61829 76 aa-0.43□□□□□ -2.48
TFB5YDR079C-A MAK3Q03503 176 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YML079WQ03629 201 aa-0.43□□□□□ -2.48
TFB5YDR079C-A VTI1Q04338 217 aa-0.43□□□□□ -2.48
TFB5YDR079C-A FAR8Q05040 523 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YLR162WQ06235 118 aa-0.43□□□□□ -2.48
TFB5YDR079C-A ATP17Q06405 101 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YOL131WQ08270 108 aa-0.43□□□□□ -2.48
TFB5YDR079C-A PEX27Q08580 376 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YPR108W-AQ3E7B3 70 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YOR008C-AQ3E7B9 74 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YLR365WQ7LIF2 110 aa-0.43□□□□□ -2.48
TFB5YDR079C-A YGR146C-AQ8TGT9 53 aa-0.43□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms