RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YNL092WP53934 400 aa6.68□□□□□ -1.34
LSR1LSR1 YLR194CQ05777 254 aa6.68□□□□□ -1.34
LSR1LSR1 PRM7Q12459 698 aa6.68□□□□□ -1.34
LSR1LSR1 YNL146C-AQ3E7Z1 64 aa6.68□□□□□ -1.34
LSR1LSR1 Q0297Q9ZZV8 51 aa6.68□□□□□ -1.34
LSR1LSR1 INO4P13902 151 aa6.67□□□□□ -1.34
LSR1LSR1 VPS55P47111 140 aa6.67□□□□□ -1.34
LSR1LSR1 TOS8P53147 276 aa6.67□□□□□ -1.34
LSR1LSR1 SPO24Q3E752 67 aa6.67□□□□□ -1.34
LSR1LSR1 MSA1Q08471 629 aa6.66□□□□□ -1.34
LSR1LSR1 YOR011W-AQ3E807 68 aa6.66□□□□□ -1.34
LSR1LSR1 PRP8P33334 2413 aaKnown RBP6.65□□□□□ -1.34
LSR1LSR1 RPS8AP0CX39 200 aaKnown RBP6.65□□□□□ -1.34
LSR1LSR1 RPS8BP0CX40 200 aaKnown RBP6.65□□□□□ -1.34
LSR1LSR1 AIM11P87275 137 aa6.65□□□□□ -1.34
LSR1LSR1 YPR053CQ6Q5F3 151 aa6.65□□□□□ -1.34
LSR1LSR1 YAR1P46683 200 aa6.64□□□□□ -1.35
LSR1LSR1 CAX4P53223 239 aa6.64□□□□□ -1.35
LSR1LSR1 SPG4Q04438 115 aa6.64□□□□□ -1.35
LSR1LSR1 HOR7Q05827 59 aa6.64□□□□□ -1.35
LSR1LSR1 YCR085WP25650 117 aa6.63□□□□□ -1.35
LSR1LSR1 VTC1P40046 129 aaRIP-Chip data6.63□□□□□ -1.35not detected
LSR1LSR1 YER135CP40082 130 aa6.63□□□□□ -1.35
LSR1LSR1 PEX17P40155 199 aa6.63□□□□□ -1.35
LSR1LSR1 DCV1P43595 202 aa6.63□□□□□ -1.35
LSR1LSR1 ISD11Q6Q560 94 aa6.63□□□□□ -1.35
LSR1LSR1 RPL16BP26785 198 aaKnown RBP6.62□□□□□ -1.35
LSR1LSR1 YFR057WP43625 151 aa6.62□□□□□ -1.35
LSR1LSR1 YJR146WP47174 117 aa6.62□□□□□ -1.35
LSR1LSR1 AIM34Q03673 198 aa6.62□□□□□ -1.35
LSR1LSR1 MRPL23Q12487 163 aaPredicted RBP6.62□□□□□ -1.35
LSR1LSR1 YFL065CP43539 102 aa6.61□□□□□ -1.35
LSR1LSR1 YMR244WQ04018 355 aa6.61□□□□□ -1.35
LSR1LSR1 YPR203WQ08994 102 aa6.61□□□□□ -1.35
LSR1LSR1 COX10P21592 462 aa6.6□□□□□ -1.35
LSR1LSR1 MIG3P39943 394 aa6.6□□□□□ -1.35
LSR1LSR1 YER085CP40058 173 aa6.6□□□□□ -1.35
LSR1LSR1 YFR035CP43608 114 aa6.6□□□□□ -1.35
LSR1LSR1 YCR075W-AQ3E830 75 aa6.6□□□□□ -1.35
LSR1LSR1 RPL16AP26784 199 aaKnown RBP6.59□□□□□ -1.35
LSR1LSR1 RPA12P32529 125 aaKnown RBP6.59□□□□□ -1.35
LSR1LSR1 SIM1P40472 476 aa6.59□□□□□ -1.35
LSR1LSR1 RRG8Q06109 277 aa6.59□□□□□ -1.35
LSR1LSR1 TAR1Q8TGM6 124 aa6.59□□□□□ -1.35
LSR1LSR1 MEC1P38111 2368 aa6.58□□□□□ -1.36
LSR1LSR1 YOR304C-AO14468 76 aa6.58□□□□□ -1.36
LSR1LSR1 TRP1P00912 224 aa6.58□□□□□ -1.36
LSR1LSR1 Q0255P03881 472 aa6.58□□□□□ -1.36
LSR1LSR1 ATP15P21306 62 aa6.58□□□□□ -1.36
LSR1LSR1 MRPS8Q03799 155 aa6.58□□□□□ -1.36
LSR1LSR1 SRL1Q08673 210 aa6.58□□□□□ -1.36
LSR1LSR1 YLR042CQ07990 161 aa6.57□□□□□ -1.36
LSR1LSR1 QCR8P08525 94 aa6.56□□□□□ -1.36
LSR1LSR1 KRE1P17260 313 aa6.56□□□□□ -1.36
LSR1LSR1 MLF3P32047 452 aa6.56□□□□□ -1.36
LSR1LSR1 YHR130CP38834 111 aa6.56□□□□□ -1.36
LSR1LSR1 RRT13P40042 185 aa6.56□□□□□ -1.36
LSR1LSR1 VHS2P40463 436 aa6.56□□□□□ -1.36
LSR1LSR1 MRPS12P53732 153 aa6.56□□□□□ -1.36
LSR1LSR1 YER145C-AA0A023PYF4 145 aa6.55□□□□□ -1.36
LSR1LSR1 RPL18AP0CX49 186 aaKnown RBP6.55□□□□□ -1.36
LSR1LSR1 RPL18BP0CX50 186 aaKnown RBP6.55□□□□□ -1.36
LSR1LSR1 UGX2P32772 223 aa6.55□□□□□ -1.36
LSR1LSR1 YCR041WP37265 110 aa6.55□□□□□ -1.36
LSR1LSR1 FIP1P45976 327 aa6.55□□□□□ -1.36
LSR1LSR1 YNL184CP53876 108 aa6.55□□□□□ -1.36
LSR1LSR1 YCH1P42937 148 aa6.54□□□□□ -1.36
LSR1LSR1 YFL041W-AQ3E817 63 aa6.54□□□□□ -1.36
LSR1LSR1 RPL28P02406 149 aaKnown RBP6.53□□□□□ -1.36
LSR1LSR1 EOS1P53938 366 aa6.53□□□□□ -1.36
LSR1LSR1 ABF2Q02486 183 aa6.53□□□□□ -1.36
LSR1LSR1 SHU1P38751 150 aa6.52□□□□□ -1.37
LSR1LSR1 RAD6P06104 172 aa6.51□□□□□ -1.37
LSR1LSR1 NRG2P38082 220 aa6.51□□□□□ -1.37
LSR1LSR1 YIA6P40556 373 aa6.51□□□□□ -1.37
LSR1LSR1 SKI6P46948 246 aaPredicted RBP6.51□□□□□ -1.37
LSR1LSR1 COX12Q01519 83 aa6.51□□□□□ -1.37
LSR1LSR1 YAL063C-AQ3E791 96 aa6.51□□□□□ -1.37
LSR1LSR1 RPL43AP0CX25 92 aaKnown RBP6.5□□□□□ -1.37
LSR1LSR1 RPL43BP0CX26 92 aa6.5□□□□□ -1.37
LSR1LSR1 RPB9P27999 122 aa6.5□□□□□ -1.37
LSR1LSR1 YAR029WP39549 74 aa6.5□□□□□ -1.37
LSR1LSR1 YNL190WP53872 204 aa6.5□□□□□ -1.37
LSR1LSR1 PPT2Q12036 173 aa6.5□□□□□ -1.37
LSR1LSR1 YEL008WP40001 126 aa6.49□□□□□ -1.37
LSR1LSR1 MID2P36027 376 aa6.48□□□□□ -1.37
LSR1LSR1 DSE2P38844 325 aa6.48□□□□□ -1.37
LSR1LSR1 YGL088WP53151 121 aa6.48□□□□□ -1.37
LSR1LSR1 YCL021W-AQ96VH3 125 aa6.48□□□□□ -1.37
LSR1LSR1 RPS11AP0CX47 156 aaKnown RBP6.46□□□□□ -1.38
LSR1LSR1 RPS11BP0CX48 156 aaKnown RBP6.46□□□□□ -1.38
LSR1LSR1 UBC5P15732 148 aa6.46□□□□□ -1.38
LSR1LSR1 YBR209WP38311 105 aa6.46□□□□□ -1.38
LSR1LSR1 AIM19P40502 157 aa6.46□□□□□ -1.38
LSR1LSR1 HUR1P45820 110 aa6.46□□□□□ -1.38
LSR1LSR1 ALG13P53178 202 aa6.46□□□□□ -1.38
LSR1LSR1 PMP3P87284 55 aa6.46□□□□□ -1.38
LSR1LSR1 YIR021W-AQ3E739 70 aa6.46□□□□□ -1.38
LSR1LSR1 RPL15AP05748 204 aaKnown RBP6.45□□□□□ -1.38
LSR1LSR1 RPL2AP0CX45 254 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms