RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 RPL36AP05745 100 aaPredicted RBP-1.28□□□□□ -2.61
snR49snR49 PAU21P0CE86 164 aa-1.28□□□□□ -2.61
snR49snR49 PAU22P0CE87 164 aa-1.28□□□□□ -2.61
snR49snR49 NHP6BP11633 99 aaKnown RBP-1.28□□□□□ -2.61
snR49snR49 QCR10P37299 77 aa-1.28□□□□□ -2.61
snR49snR49 EGD2P38879 174 aaKnown RBP-1.28□□□□□ -2.61
snR49snR49 HSP10P38910 106 aa-1.28□□□□□ -2.61
snR49snR49 YER181CP40097 107 aa-1.28□□□□□ -2.61
snR49snR49 DDP1Q99321 188 aaKnown RBP-1.28□□□□□ -2.61
snR49snR49 BPH1P25356 2167 aa-1.29□□□□□ -2.62
snR49snR49 HMRA2P0CY13 119 aa-1.29□□□□□ -2.62
snR49snR49 YKT6P36015 200 aaKnown RBP-1.29□□□□□ -2.62
snR49snR49 YGR201CP42936 225 aa-1.29□□□□□ -2.62
snR49snR49 JAC1P53193 184 aa-1.29□□□□□ -2.62
snR49snR49 QCR2P07257 368 aa-1.3□□□□□ -2.62
snR49snR49 MRPL44P19956 98 aa-1.3□□□□□ -2.62
snR49snR49 DER1P38307 211 aa-1.3□□□□□ -2.62
snR49snR49 YER187WP40102 141 aa-1.3□□□□□ -2.62
snR49snR49 YGR025WP53216 100 aa-1.3□□□□□ -2.62
snR49snR49 RAF1Q06891 181 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-DR5P0C2I2 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-DR6P0C2I3 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-LR2P0C2I5 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-PR1P0C2I9 1755 aaKnown RBP-1.3□□□□□ -2.62
snR49snR49 TY1B-PR2P0C2J0 1756 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-JR1P47098 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-JR2P47100 1755 aaKnown RBP-1.3□□□□□ -2.62
snR49snR49 TY1B-ML2Q03434 1755 aaKnown RBP-1.3□□□□□ -2.62
snR49snR49 TY1B-ER1Q03612 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-DR1Q03855 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-MR2Q04670 1755 aaKnown RBP-1.3□□□□□ -2.62
snR49snR49 TY1B-ML1Q04711 1755 aaKnown RBP-1.3□□□□□ -2.62
snR49snR49 TY1B-GR1Q12141 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-GR2Q12269 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-OLQ12273 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-PLQ12414 1755 aaKnown RBP-1.3□□□□□ -2.62
snR49snR49 TY1B-ORQ92393 1755 aa-1.3□□□□□ -2.62
snR49snR49 TY1B-DR3Q99231 1755 aa-1.3□□□□□ -2.62
snR49snR49 DNA2P38859 1522 aa-1.3□□□□□ -2.62
snR49snR49 RPL30P14120 105 aaKnown RBP-1.31□□□□□ -2.62
snR49snR49 HSP12P22943 109 aaKnown RBP-1.31□□□□□ -2.62
snR49snR49 YCR101CP25607 182 aa-1.31□□□□□ -2.62
snR49snR49 LSM1P47017 172 aaKnown RBP-1.31□□□□□ -2.62
snR49snR49 PAU12P53343 120 aa-1.31□□□□□ -2.62
snR49snR49 AIM11P87275 137 aa-1.31□□□□□ -2.62
snR49snR49 SNO1Q03144 224 aa-1.31□□□□□ -2.62
snR49snR49 SDH7Q04401 133 aa-1.31□□□□□ -2.62
snR49snR49 NSL1Q12143 216 aa-1.31□□□□□ -2.62
snR49snR49 YCL048W-AQ2V2Q2 79 aa-1.31□□□□□ -2.62
snR49snR49 COX19Q3E731 98 aa-1.31□□□□□ -2.62
snR49snR49 PET54P10834 293 aa-1.32□□□□□ -2.62
snR49snR49 CBF1P17106 351 aa-1.32□□□□□ -2.62
snR49snR49 ROX3P25046 220 aa-1.32□□□□□ -2.62
snR49snR49 RSM18P40033 138 aa-1.32□□□□□ -2.62
snR49snR49 RGI1P40043 161 aaPredicted RBP-1.32□□□□□ -2.62
snR49snR49 DLS1P40366 167 aa-1.32□□□□□ -2.62
snR49snR49 MSS2P40990 351 aa-1.32□□□□□ -2.62
snR49snR49 RPL38P49167 78 aaKnown RBP-1.32□□□□□ -2.62
snR49snR49 YNL140CP53910 189 aa-1.32□□□□□ -2.62
snR49snR49 YDR476CQ03362 224 aa-1.32□□□□□ -2.62
snR49snR49 YDR210WQ03482 75 aa-1.32□□□□□ -2.62
snR49snR49 YLR042CQ07990 161 aa-1.32□□□□□ -2.62
snR49snR49 EFG1Q3E705 233 aaKnown RBP-1.32□□□□□ -2.62
snR49snR49 MIC10Q96VH5 97 aa-1.32□□□□□ -2.62
snR49snR49 YPK9Q12697 1472 aa-1.32□□□□□ -2.62
snR49snR49 IMP2P46972 177 aa-1.33□□□□□ -2.62
snR49snR49 LSM8P47093 109 aaKnown RBP-1.33□□□□□ -2.62
snR49snR49 YGR042WP53227 271 aa-1.33□□□□□ -2.62
snR49snR49 LSM3P57743 89 aaKnown RBP-1.33□□□□□ -2.62
snR49snR49 TMA20P89886 181 aaPredicted RBP-1.33□□□□□ -2.62
snR49snR49 YPL038W-AQ3E7B4 63 aa-1.33□□□□□ -2.62
snR49snR49 YRF1-1P0CX20 1796 aa-1.34□□□□□ -2.62
snR49snR49 YRF1-5P0CX21 1796 aa-1.34□□□□□ -2.62
snR49snR49 YRF1-8P0CX22 1796 aa-1.34□□□□□ -2.62
snR49snR49 YJL197C-AP0C5P0 93 aa-1.34□□□□□ -2.62
snR49snR49 YCR050CP25630 102 aa-1.34□□□□□ -2.62
snR49snR49 YPD1Q07688 167 aa-1.34□□□□□ -2.62
snR49snR49 YLR363W-AQ3E747 85 aa-1.34□□□□□ -2.62
snR49snR49 SSN2P38931 1420 aa-1.34□□□□□ -2.62
snR49snR49 BUD4P47136 1447 aa-1.34□□□□□ -2.62
snR49snR49 RPL14AP36105 138 aaKnown RBP-1.35□□□□□ -2.63
snR49snR49 PDX3P38075 228 aaKnown RBP-1.35□□□□□ -2.63
snR49snR49 PAU24P38155 120 aa-1.35□□□□□ -2.63
snR49snR49 SHG1P38337 142 aa-1.35□□□□□ -2.63
snR49snR49 MRX7P53869 86 aa-1.35□□□□□ -2.63
snR49snR49 MRPS17Q03246 237 aaPredicted RBP-1.35□□□□□ -2.63
snR49snR49 ICY1Q04329 127 aa-1.35□□□□□ -2.63
snR49snR49 MIX14Q04341 121 aa-1.35□□□□□ -2.63
snR49snR49 YPR202WQ08993 238 aa-1.35□□□□□ -2.63
snR49snR49 YLR050CQ12155 161 aaKnown RBP-1.35□□□□□ -2.63
snR49snR49 YIR021W-AQ3E739 70 aa-1.35□□□□□ -2.63
snR49snR49 TRM732Q03496 1420 aa-1.35□□□□□ -2.63
snR49snR49 INO80P53115 1489 aa-1.36□□□□□ -2.63
snR49snR49 TRS20P38334 175 aa-1.36□□□□□ -2.63
snR49snR49 YHR130CP38834 111 aa-1.36□□□□□ -2.63
snR49snR49 APQ12P40532 138 aa-1.36□□□□□ -2.63
snR49snR49 LSM6Q06406 86 aaKnown RBP-1.36□□□□□ -2.63
snR49snR49 PCC1Q3E833 88 aa-1.36□□□□□ -2.63
snR49snR49 MMS1Q06211 1407 aa-1.37□□□□□ -2.63
snR49snR49 JIP3O13555 125 aa-1.37□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms