RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C COX19Q3E731 98 aa2.39□□□□□ -2.03
RPA43YOR340C QCR9P22289 66 aa2.38□□□□□ -2.03
RPA43YOR340C RPL14AP36105 138 aaKnown RBP2.38□□□□□ -2.03
RPA43YOR340C RPL14BP38754 138 aaKnown RBP2.38□□□□□ -2.03
RPA43YOR340C EMC5P40540 141 aa2.38□□□□□ -2.03
RPA43YOR340C COX12Q01519 83 aa2.38□□□□□ -2.03
RPA43YOR340C UBC7Q02159 165 aa2.38□□□□□ -2.03
RPA43YOR340C RAV2Q03956 351 aa2.38□□□□□ -2.03
RPA43YOR340C YNL146C-AQ3E7Z1 64 aa2.38□□□□□ -2.03
RPA43YOR340C YBR090CP38253 122 aa2.37□□□□□ -2.03
RPA43YOR340C TEM1P38987 245 aa2.37□□□□□ -2.03
RPA43YOR340C ERG28P40030 148 aa2.37□□□□□ -2.03
RPA43YOR340C SPI1P40092 148 aa2.37□□□□□ -2.03
RPA43YOR340C YMR141CP40211 102 aa2.37□□□□□ -2.03
RPA43YOR340C YIL163CP40448 117 aa2.37□□□□□ -2.03
RPA43YOR340C YCL001W-AP87012 153 aa2.37□□□□□ -2.03
RPA43YOR340C MRPS8Q03799 155 aa2.37□□□□□ -2.03
RPA43YOR340C ATP14Q12349 124 aa2.37□□□□□ -2.03
RPA43YOR340C YKL183C-AQ3E765 70 aa2.37□□□□□ -2.03
RPA43YOR340C RPB3P16370 318 aaKnown RBP2.36□□□□□ -2.03
RPA43YOR340C NTF2P33331 125 aaKnown RBP2.36□□□□□ -2.03
RPA43YOR340C YBR292CP38357 123 aa2.36□□□□□ -2.03
RPA43YOR340C YHR022CP38763 256 aa2.36□□□□□ -2.03
RPA43YOR340C SPC25P40014 221 aa2.36□□□□□ -2.03
RPA43YOR340C TMA23Q03525 211 aa2.36□□□□□ -2.03
RPA43YOR340C GIM5Q04493 163 aa2.36□□□□□ -2.03
RPA43YOR340C FCF1Q05498 189 aaPredicted RBP2.36□□□□□ -2.03
RPA43YOR340C SMT3Q12306 101 aaKnown RBP2.36□□□□□ -2.03
RPA43YOR340C HTB2P02294 131 aa2.35□□□□□ -2.03
RPA43YOR340C MRS1P07266 363 aa2.35□□□□□ -2.03
RPA43YOR340C RPL27AP0C2H6 136 aaKnown RBP2.35□□□□□ -2.03
RPA43YOR340C RPL27BP0C2H7 136 aaKnown RBP2.35□□□□□ -2.03
RPA43YOR340C YBR121C-AP0C5L4 52 aa2.35□□□□□ -2.03
RPA43YOR340C HSP12P22943 109 aaKnown RBP2.35□□□□□ -2.03
RPA43YOR340C SMD3P43321 101 aaKnown RBP2.35□□□□□ -2.03
RPA43YOR340C PAU4P53427 120 aa2.35□□□□□ -2.03
RPA43YOR340C YPR195CQ06594 109 aa2.35□□□□□ -2.03
RPA43YOR340C CCW12Q12127 133 aa2.35□□□□□ -2.03
RPA43YOR340C VMA9Q3E7B6 73 aa2.35□□□□□ -2.03
RPA43YOR340C YPL229WQ99395 206 aa2.35□□□□□ -2.03
RPA43YOR340C PAU1P0CE88 120 aa2.34□□□□□ -2.03
RPA43YOR340C PAU14P0CE89 120 aa2.34□□□□□ -2.03
RPA43YOR340C PAU6P0CE90 120 aa2.34□□□□□ -2.03
RPA43YOR340C PAU18P0CE91 120 aa2.34□□□□□ -2.03
RPA43YOR340C PAU8P0CE92 120 aa2.34□□□□□ -2.03
RPA43YOR340C PAU11P0CE93 120 aa2.34□□□□□ -2.03
RPA43YOR340C RPS11AP0CX47 156 aaKnown RBP2.34□□□□□ -2.03
RPA43YOR340C RPS11BP0CX48 156 aaKnown RBP2.34□□□□□ -2.03
RPA43YOR340C YCR001WP25347 104 aa2.34□□□□□ -2.03
RPA43YOR340C FZF1P32805 299 aa2.34□□□□□ -2.03
RPA43YOR340C PAU13P38725 120 aa2.34□□□□□ -2.03
RPA43YOR340C YHR173CP38864 112 aa2.34□□□□□ -2.03
RPA43YOR340C VMA7P39111 118 aa2.34□□□□□ -2.03
RPA43YOR340C SNX4P47057 423 aa2.34□□□□□ -2.03
RPA43YOR340C SNN1P48232 102 aa2.34□□□□□ -2.03
RPA43YOR340C PAU10Q03050 120 aa2.34□□□□□ -2.03
RPA43YOR340C YMR253CQ04835 414 aa2.34□□□□□ -2.03
RPA43YOR340C PAU20Q08322 120 aa2.34□□□□□ -2.03
RPA43YOR340C YPR145C-AQ2V2P0 78 aa2.34□□□□□ -2.03
RPA43YOR340C PAU9Q3E770 120 aa2.34□□□□□ -2.03
RPA43YOR340C VAR1P02381 398 aa2.33□□□□□ -2.04
RPA43YOR340C RPL28P02406 149 aaKnown RBP2.33□□□□□ -2.04
RPA43YOR340C MCM22P47167 239 aa2.33□□□□□ -2.04
RPA43YOR340C UBC12P52491 188 aa2.33□□□□□ -2.04
RPA43YOR340C DIA1P54005 336 aa2.33□□□□□ -2.04
RPA43YOR340C DAD4P69851 72 aa2.33□□□□□ -2.04
RPA43YOR340C YPL162CQ12042 273 aa2.33□□□□□ -2.04
RPA43YOR340C DCN1Q12395 269 aa2.33□□□□□ -2.04
RPA43YOR340C RPL2AP0CX45 254 aaKnown RBP2.32□□□□□ -2.04
RPA43YOR340C RPL2BP0CX46 254 aaKnown RBP2.32□□□□□ -2.04
RPA43YOR340C SRP21P32342 167 aa2.32□□□□□ -2.04
RPA43YOR340C ACP1P32463 125 aa2.32□□□□□ -2.04
RPA43YOR340C SRP14P38985 146 aa2.32□□□□□ -2.04
RPA43YOR340C SEC72P39742 193 aaKnown RBP2.32□□□□□ -2.04
RPA43YOR340C PGD1P40356 397 aa2.32□□□□□ -2.04
RPA43YOR340C POG1P40473 351 aa2.32□□□□□ -2.04
RPA43YOR340C SNO1Q03144 224 aa2.32□□□□□ -2.04
RPA43YOR340C RPS22AP0C0W1 130 aaKnown RBP2.31□□□□□ -2.04
RPA43YOR340C AME1P38313 324 aa2.31□□□□□ -2.04
RPA43YOR340C SHG1P38337 142 aa2.31□□□□□ -2.04
RPA43YOR340C MGA1P53050 456 aa2.31□□□□□ -2.04
RPA43YOR340C VAM10Q08474 114 aa2.31□□□□□ -2.04
RPA43YOR340C Q0255P03881 472 aa2.3□□□□□ -2.04
RPA43YOR340C TIR1P10863 254 aa2.3□□□□□ -2.04
RPA43YOR340C KRE1P17260 313 aa2.3□□□□□ -2.04
RPA43YOR340C MSA2P36157 363 aa2.3□□□□□ -2.04
RPA43YOR340C PEX17P40155 199 aa2.3□□□□□ -2.04
RPA43YOR340C CYB5P40312 120 aa2.3□□□□□ -2.04
RPA43YOR340C PHS1P40857 217 aa2.3□□□□□ -2.04
RPA43YOR340C ATP19P81451 68 aa2.3□□□□□ -2.04
RPA43YOR340C SGF11Q03067 99 aa2.3□□□□□ -2.04
RPA43YOR340C NAT3Q06504 195 aa2.3□□□□□ -2.04
RPA43YOR340C YOR268CQ08734 132 aa2.3□□□□□ -2.04
RPA43YOR340C YBR200W-AQ3E755 54 aa2.3□□□□□ -2.04
RPA43YOR340C YLR342W-AQ3E810 57 aa2.3□□□□□ -2.04
RPA43YOR340C BRP1P53194 125 aa2.29□□□□□ -2.04
RPA43YOR340C DAD3P69850 94 aa2.29□□□□□ -2.04
RPA43YOR340C DAD1Q12248 94 aa2.29□□□□□ -2.04
RPA43YOR340C PCC1Q3E833 88 aa2.29□□□□□ -2.04
RPA43YOR340C YCL001W-BQ96VH2 84 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms