RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W RTR2Q12378 196 aa1.33□□□□□ -2.2
SRL1YOR247W YJL197C-AP0C5P0 93 aa1.32□□□□□ -2.2
SRL1YOR247W YFR035CP43608 114 aa1.32□□□□□ -2.2
SRL1YOR247W MIC27P50945 234 aa1.32□□□□□ -2.2
SRL1YOR247W RPL37BP51402 88 aaKnown RBP1.32□□□□□ -2.2
SRL1YOR247W YIL014C-AQ02598 104 aa1.32□□□□□ -2.2
SRL1YOR247W YLR194CQ05777 254 aa1.32□□□□□ -2.2
SRL1YOR247W YLR042CQ07990 161 aa1.32□□□□□ -2.2
SRL1YOR247W FIT3Q08907 204 aa1.32□□□□□ -2.2
SRL1YOR247W YBR013CP38215 129 aa1.31□□□□□ -2.2
SRL1YOR247W YIL163CP40448 117 aa1.31□□□□□ -2.2
SRL1YOR247W PAM16P42949 149 aa1.31□□□□□ -2.2
SRL1YOR247W YPL261CQ08976 102 aa1.31□□□□□ -2.2
SRL1YOR247W OST5Q92316 86 aa1.31□□□□□ -2.2
SRL1YOR247W YAR029WP39549 74 aa1.3□□□□□ -2.2
SRL1YOR247W MVB12P42939 101 aa1.3□□□□□ -2.2
SRL1YOR247W RPL22AP05749 121 aaKnown RBP1.29□□□□□ -2.2
SRL1YOR247W ADK1P07170 222 aaKnown RBP1.28□□□□□ -2.2
SRL1YOR247W MRPL31P14063 131 aaPredicted RBP1.28□□□□□ -2.2
SRL1YOR247W EMP24P32803 203 aaKnown RBP1.28□□□□□ -2.2
SRL1YOR247W YER187WP40102 141 aa1.28□□□□□ -2.2
SRL1YOR247W GTT1P40582 234 aa1.28□□□□□ -2.2
SRL1YOR247W ICS3P47034 131 aa1.28□□□□□ -2.2
SRL1YOR247W RPL22BP56628 122 aaKnown RBP1.28□□□□□ -2.2
SRL1YOR247W DAD1Q12248 94 aa1.28□□□□□ -2.2
SRL1YOR247W HUG1Q6Q5K6 68 aa1.28□□□□□ -2.2
SRL1YOR247W SPP41P38904 1435 aa1.28□□□□□ -2.2
SRL1YOR247W YHR130CP38834 111 aa1.27□□□□□ -2.21
SRL1YOR247W YMR141CP40211 102 aa1.27□□□□□ -2.21
SRL1YOR247W POR2P40478 281 aa1.27□□□□□ -2.21
SRL1YOR247W PAU12P53343 120 aa1.27□□□□□ -2.21
SRL1YOR247W YLR365WQ7LIF2 110 aa1.27□□□□□ -2.21
SRL1YOR247W RUB1Q03919 77 aa1.26□□□□□ -2.21
SRL1YOR247W PCC1Q3E833 88 aa1.26□□□□□ -2.21
SRL1YOR247W ENV10Q99382 181 aa1.26□□□□□ -2.21
SRL1YOR247W YER188C-AP0C0V2 99 aa1.25□□□□□ -2.21
SRL1YOR247W SRX1P36077 127 aa1.25□□□□□ -2.21
SRL1YOR247W SNN1P48232 102 aa1.25□□□□□ -2.21
SRL1YOR247W OCA6Q12454 224 aa1.25□□□□□ -2.21
SRL1YOR247W YLR363W-AQ3E747 85 aa1.25□□□□□ -2.21
SRL1YOR247W YGL041C-BQ3E750 60 aa1.25□□□□□ -2.21
SRL1YOR247W GSC2P40989 1895 aa1.24□□□□□ -2.21
SRL1YOR247W YER039C-AP0CD97 72 aa1.24□□□□□ -2.21
SRL1YOR247W COX23P38824 151 aa1.24□□□□□ -2.21
SRL1YOR247W CYB5P40312 120 aa1.24□□□□□ -2.21
SRL1YOR247W YGR164WP53291 111 aa1.24□□□□□ -2.21
SRL1YOR247W SWC7Q06707 132 aa1.24□□□□□ -2.21
SRL1YOR247W YMR321CQ04898 105 aa1.23□□□□□ -2.21
SRL1YOR247W YLR285C-AQ3E771 56 aa1.23□□□□□ -2.21
SRL1YOR247W TY4B-JP47024 1803 aa1.23□□□□□ -2.21
SRL1YOR247W YIR020CP40575 100 aa1.22□□□□□ -2.21
SRL1YOR247W VMA21P41806 77 aa1.22□□□□□ -2.21
SRL1YOR247W YGR240C-AQ3E786 66 aa1.22□□□□□ -2.21
SRL1YOR247W HUR1P45820 110 aa1.21□□□□□ -2.22
SRL1YOR247W MDS3P53094 1487 aa1.2□□□□□ -2.22
SRL1YOR247W PAU2P32612 120 aa1.2□□□□□ -2.22
SRL1YOR247W GNA1P43577 159 aaPredicted RBP1.2□□□□□ -2.22
SRL1YOR247W RPS12P48589 143 aaKnown RBP1.2□□□□□ -2.22
SRL1YOR247W YPK9Q12697 1472 aa1.19□□□□□ -2.22
SRL1YOR247W PAU19P0CE85 124 aa1.19□□□□□ -2.22
SRL1YOR247W PAU3P25610 124 aa1.19□□□□□ -2.22
SRL1YOR247W LHP1P33399 275 aaKnown RBP1.19□□□□□ -2.22
SRL1YOR247W PAU24P38155 120 aa1.19□□□□□ -2.22
SRL1YOR247W RGI1P40043 161 aaPredicted RBP1.19□□□□□ -2.22
SRL1YOR247W HMRA2P0CY13 119 aa1.18□□□□□ -2.22
SRL1YOR247W YER137CP40083 148 aaKnown RBP1.18□□□□□ -2.22
SRL1YOR247W YJR128WP47162 119 aa1.18□□□□□ -2.22
SRL1YOR247W YOR034C-AQ3E735 80 aa1.18□□□□□ -2.22
SRL1YOR247W RPL43AP0CX25 92 aaKnown RBP1.17□□□□□ -2.22
SRL1YOR247W RPL43BP0CX26 92 aa1.17□□□□□ -2.22
SRL1YOR247W YEA6P39953 335 aa1.17□□□□□ -2.22
SRL1YOR247W VPS55P47111 140 aa1.17□□□□□ -2.22
SRL1YOR247W YCL048W-AQ2V2Q2 79 aa1.17□□□□□ -2.22
SRL1YOR247W YOS1Q3E834 85 aa1.16□□□□□ -2.22
SRL1YOR247W TSC11P40061 1430 aa1.15□□□□□ -2.22
SRL1YOR247W YMR103CQ04436 120 aa1.15□□□□□ -2.23
SRL1YOR247W YRF1-3P0CX14 1859 aa1.15□□□□□ -2.23
SRL1YOR247W YRF1-7P0CX15 1859 aa1.15□□□□□ -2.23
SRL1YOR247W MON2P48563 1636 aaPredicted RBP1.15□□□□□ -2.23
SRL1YOR247W DNA2P38859 1522 aa1.15□□□□□ -2.23
SRL1YOR247W YBR090CP38253 122 aa1.14□□□□□ -2.23
SRL1YOR247W YHR138CP38841 114 aaPredicted RBP1.14□□□□□ -2.23
SRL1YOR247W LCL1Q02786 101 aa1.14□□□□□ -2.23
SRL1YOR247W YMR090WQ04304 227 aaKnown RBP1.14□□□□□ -2.23
SRL1YOR247W LSM6Q06406 86 aaKnown RBP1.14□□□□□ -2.23
SRL1YOR247W SRB6P32570 121 aa1.13□□□□□ -2.23
SRL1YOR247W YLR307C-AQ3E825 87 aa1.13□□□□□ -2.23
SRL1YOR247W LYS2P07702 1392 aa1.12□□□□□ -2.23
SRL1YOR247W LAA1P39526 2014 aa1.12□□□□□ -2.23
SRL1YOR247W BUD23P25627 275 aaPredicted RBP1.12□□□□□ -2.23
SRL1YOR247W PAU16P35994 123 aa1.12□□□□□ -2.23
SRL1YOR247W PAU15P40585 124 aa1.12□□□□□ -2.23
SRL1YOR247W MRPS12P53732 153 aa1.12□□□□□ -2.23
SRL1YOR247W YOL118CQ08259 102 aa1.12□□□□□ -2.23
SRL1YOR247W MIC10Q96VH5 97 aa1.12□□□□□ -2.23
SRL1YOR247W UBC5P15732 148 aa1.11□□□□□ -2.23
SRL1YOR247W YCR101CP25607 182 aa1.11□□□□□ -2.23
SRL1YOR247W YLR419WQ06698 1435 aaKnown RBP1.11□□□□□ -2.23
SRL1YOR247W YLR157W-EP0CF00 54 aa1.1□□□□□ -2.23
SRL1YOR247W UBC4P15731 148 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms