RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeastyeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUD3YOR216C CYR1P08678 2026 aaKnown RBP1.34□□□□□ -2.19
RUD3YOR216C UBC4P15731 148 aa1.34□□□□□ -2.19
RUD3YOR216C YER187WP40102 141 aa1.34□□□□□ -2.19
RUD3YOR216C YGL149WP53116 101 aa1.34□□□□□ -2.19
RUD3YOR216C YPL067CQ02754 198 aa1.34□□□□□ -2.19
RUD3YOR216C MIX14Q04341 121 aa1.34□□□□□ -2.19
RUD3YOR216C DAD1Q12248 94 aa1.34□□□□□ -2.19
RUD3YOR216C COA6Q3E846 104 aa1.34□□□□□ -2.19
RUD3YOR216C GCN1P33892 2672 aaKnown RBP1.34□□□□□ -2.2
RUD3YOR216C ROM2P51862 1356 aaKnown RBP1.34□□□□□ -2.2
RUD3YOR216C YJL197C-AP0C5P0 93 aa1.33□□□□□ -2.2
RUD3YOR216C FUN14P18411 198 aa1.33□□□□□ -2.2
RUD3YOR216C PRE1P22141 198 aaKnown RBP1.33□□□□□ -2.2
RUD3YOR216C YGL010WP25338 174 aa1.33□□□□□ -2.2
RUD3YOR216C RPB7P34087 171 aa1.33□□□□□ -2.2
RUD3YOR216C IPT1P38954 527 aa1.33□□□□□ -2.2
RUD3YOR216C GPI11Q06636 219 aa1.33□□□□□ -2.2
RUD3YOR216C YPL261CQ08976 102 aa1.33□□□□□ -2.2
RUD3YOR216C TY1B-DR1Q03855 1755 aa1.33□□□□□ -2.2
RUD3YOR216C TY1B-DR3Q99231 1755 aa1.33□□□□□ -2.2
RUD3YOR216C HSP150P32478 413 aa1.32□□□□□ -2.2
RUD3YOR216C UTR5P32630 166 aa1.32□□□□□ -2.2
RUD3YOR216C TEL1P38110 2787 aa1.32□□□□□ -2.2
RUD3YOR216C YHR130CP38834 111 aa1.32□□□□□ -2.2
RUD3YOR216C LAA1P39526 2014 aa1.32□□□□□ -2.2
RUD3YOR216C FLO9P39712 1322 aa1.32□□□□□ -2.2
RUD3YOR216C SNU13P39990 126 aaKnown RBP1.32□□□□□ -2.2
RUD3YOR216C YFL051CP43552 160 aa1.32□□□□□ -2.2
RUD3YOR216C MIX17Q03667 156 aa1.32□□□□□ -2.2
RUD3YOR216C KSH1Q8TGJ3 72 aa1.32□□□□□ -2.2
RUD3YOR216C OST5Q92316 86 aa1.32□□□□□ -2.2
RUD3YOR216C NTE1Q04958 1679 aa1.32□□□□□ -2.2
RUD3YOR216C YPK9Q12697 1472 aa1.32□□□□□ -2.2
RUD3YOR216C YLR419WQ06698 1435 aaKnown RBP1.31□□□□□ -2.2
RUD3YOR216C FMP27Q06179 2628 aa1.31□□□□□ -2.2
RUD3YOR216C RPL36BO14455 100 aaKnown RBP1.31□□□□□ -2.2
RUD3YOR216C RTC6O14464 93 aa1.31□□□□□ -2.2
RUD3YOR216C RPL36AP05745 100 aaPredicted RBP1.31□□□□□ -2.2
RUD3YOR216C MSL1P40567 111 aaPredicted RBP1.31□□□□□ -2.2
RUD3YOR216C YIL014C-AQ02598 104 aa1.31□□□□□ -2.2
RUD3YOR216C YLR296WQ05898 108 aa1.31□□□□□ -2.2
RUD3YOR216C VAM10Q08474 114 aa1.31□□□□□ -2.2
RUD3YOR216C CMC4Q3E7A9 73 aa1.31□□□□□ -2.2
RUD3YOR216C YKL068W-AQ3E826 78 aa1.31□□□□□ -2.2
RUD3YOR216C FAS2P19097 1887 aaKnown RBP1.31□□□□□ -2.2
RUD3YOR216C YSP2Q06681 1438 aa1.31□□□□□ -2.2
RUD3YOR216C RSM19P53733 91 aaPredicted RBP1.31□□□□□ -2.2
RUD3YOR216C AVO2Q04749 426 aa1.31□□□□□ -2.2
RUD3YOR216C YDR029WQ12111 104 aa1.31□□□□□ -2.2
RUD3YOR216C YGL194C-AQ2V2P6 80 aa1.31□□□□□ -2.2
RUD3YOR216C MIC10Q96VH5 97 aa1.31□□□□□ -2.2
RUD3YOR216C VPS13Q07878 3144 aa1.3□□□□□ -2.2
RUD3YOR216C TY4B-JP47024 1803 aa1.3□□□□□ -2.2
RUD3YOR216C RPL40AP0CH08 128 aaKnown RBP1.3□□□□□ -2.2
RUD3YOR216C RPL40BP0CH09 128 aaKnown RBP1.3□□□□□ -2.2
RUD3YOR216C RPL22BP56628 122 aaKnown RBP1.3□□□□□ -2.2
RUD3YOR216C YMR082CQ04276 118 aa1.3□□□□□ -2.2
RUD3YOR216C HPA2Q06592 156 aa1.3□□□□□ -2.2
RUD3YOR216C FIT3Q08907 204 aa1.3□□□□□ -2.2
RUD3YOR216C MHF1Q3E835 90 aa1.3□□□□□ -2.2
RUD3YOR216C SLH1P53327 1967 aaKnown RBP1.29□□□□□ -2.2
RUD3YOR216C PFY1P07274 126 aa1.29□□□□□ -2.2
RUD3YOR216C QCR8P08525 94 aa1.29□□□□□ -2.2
RUD3YOR216C YHR213WP0CI67 198 aa1.29□□□□□ -2.2
RUD3YOR216C SRX1P36077 127 aa1.29□□□□□ -2.2
RUD3YOR216C YKR045CP36138 183 aa1.29□□□□□ -2.2
RUD3YOR216C ATG8P38182 117 aaRIP-Chip data1.29□□□□□ -2.2not detected
RUD3YOR216C YHR138CP38841 114 aaPredicted RBP1.29□□□□□ -2.2
RUD3YOR216C RPL13BP40212 199 aaKnown RBP1.29□□□□□ -2.2
RUD3YOR216C EMC5P40540 141 aa1.29□□□□□ -2.2
RUD3YOR216C SNN1P48232 102 aa1.29□□□□□ -2.2
RUD3YOR216C SED1Q01589 338 aa1.29□□□□□ -2.2
RUD3YOR216C SCP1Q08873 200 aa1.29□□□□□ -2.2
RUD3YOR216C PCC1Q3E833 88 aa1.29□□□□□ -2.2
RUD3YOR216C ACC1Q00955 2233 aaKnown RBP1.28□□□□□ -2.2
RUD3YOR216C ECM12O13529 151 aa1.28□□□□□ -2.2
RUD3YOR216C RPL33AP05744 107 aaKnown RBP1.28□□□□□ -2.2
RUD3YOR216C YHL005CP38752 130 aa1.28□□□□□ -2.2
RUD3YOR216C DAN1P47178 298 aa1.28□□□□□ -2.2
RUD3YOR216C SUS1Q6WNK7 96 aa1.28□□□□□ -2.2
RUD3YOR216C GDB1Q06625 1536 aa1.28□□□□□ -2.2
RUD3YOR216C URB1P34241 1764 aaKnown RBP1.28□□□□□ -2.2
RUD3YOR216C YOR093CQ12275 1648 aa1.28□□□□□ -2.21
RUD3YOR216C PRP8P33334 2413 aaKnown RBP1.27□□□□□ -2.21
RUD3YOR216C YGL014C-AP0C5N1 53 aa1.27□□□□□ -2.21
RUD3YOR216C SRB6P32570 121 aa1.27□□□□□ -2.21
RUD3YOR216C YBR027CP38220 110 aa1.27□□□□□ -2.21
RUD3YOR216C YIR020CP40575 100 aa1.27□□□□□ -2.21
RUD3YOR216C PAU12P53343 120 aa1.27□□□□□ -2.21
RUD3YOR216C RGM1Q00453 211 aa1.27□□□□□ -2.21
RUD3YOR216C YLR194CQ05777 254 aa1.27□□□□□ -2.21
RUD3YOR216C TAR1Q8TGM6 124 aa1.27□□□□□ -2.21
RUD3YOR216C DOP1Q03921 1698 aa1.27□□□□□ -2.21
RUD3YOR216C ECM29P38737 1868 aa1.26□□□□□ -2.21
RUD3YOR216C PAU19P0CE85 124 aa1.26□□□□□ -2.21
RUD3YOR216C HMRA1P0CY11 126 aa1.26□□□□□ -2.21
RUD3YOR216C FPR1P20081 114 aaKnown RBP1.26□□□□□ -2.21
RUD3YOR216C PAU3P25610 124 aa1.26□□□□□ -2.21
RUD3YOR216C NRG2P38082 220 aa1.26□□□□□ -2.21
RUD3YOR216C YBR219CP38317 127 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms