RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C TOR1P35169 2470 aa2.71□□□□□ -1.97
VPS21YOR089C YBR056W-AI2HB52 66 aa2.71□□□□□ -1.98
VPS21YOR089C FZF1P32805 299 aa2.71□□□□□ -1.98
VPS21YOR089C YHL037CP38733 133 aa2.71□□□□□ -1.98
VPS21YOR089C YFL051CP43552 160 aa2.71□□□□□ -1.98
VPS21YOR089C SNN1P48232 102 aa2.71□□□□□ -1.98
VPS21YOR089C SIP18P50263 79 aa2.71□□□□□ -1.98
VPS21YOR089C YMR082CQ04276 118 aa2.71□□□□□ -1.98
VPS21YOR089C UPS1Q05776 175 aa2.71□□□□□ -1.98
VPS21YOR089C NAT3Q06504 195 aa2.71□□□□□ -1.98
VPS21YOR089C BOL1Q3E793 110 aa2.71□□□□□ -1.98
VPS21YOR089C COA2Q3E823 68 aa2.71□□□□□ -1.98
VPS21YOR089C HUG1Q6Q5K6 68 aa2.71□□□□□ -1.98
VPS21YOR089C CDC39P25655 2108 aaKnown RBP2.71□□□□□ -1.98
VPS21YOR089C YLR236CA0A023PZG4 107 aa2.7□□□□□ -1.98
VPS21YOR089C SRB6P32570 121 aa2.7□□□□□ -1.98
VPS21YOR089C SLM6P38343 150 aa2.7□□□□□ -1.98
VPS21YOR089C NSA2P40078 261 aaKnown RBP2.7□□□□□ -1.98
VPS21YOR089C EMC5P40540 141 aa2.7□□□□□ -1.98
VPS21YOR089C YCL001W-AP87012 153 aa2.7□□□□□ -1.98
VPS21YOR089C COX19Q3E731 98 aa2.7□□□□□ -1.98
VPS21YOR089C DDI2P0CH63 225 aa2.69□□□□□ -1.98
VPS21YOR089C DDI3P0CH64 225 aa2.69□□□□□ -1.98
VPS21YOR089C SPC25P40014 221 aa2.69□□□□□ -1.98
VPS21YOR089C YPL067CQ02754 198 aa2.69□□□□□ -1.98
VPS21YOR089C FIT1Q04433 528 aa2.69□□□□□ -1.98
VPS21YOR089C RIM9Q04734 239 aa2.69□□□□□ -1.98
VPS21YOR089C FCF2Q12035 217 aaPredicted RBP2.69□□□□□ -1.98
VPS21YOR089C PRP8P33334 2413 aaKnown RBP2.69□□□□□ -1.98
VPS21YOR089C TIR1P10863 254 aa2.68□□□□□ -1.98
VPS21YOR089C CPR5P35176 225 aa2.68□□□□□ -1.98
VPS21YOR089C ECM31P38122 312 aa2.68□□□□□ -1.98
VPS21YOR089C MPC3P53311 146 aa2.68□□□□□ -1.98
VPS21YOR089C HHO1P53551 258 aa2.68□□□□□ -1.98
VPS21YOR089C YMR090WQ04304 227 aaKnown RBP2.68□□□□□ -1.98
VPS21YOR089C PCC1Q3E833 88 aa2.68□□□□□ -1.98
VPS21YOR089C MEC1P38111 2368 aa2.67□□□□□ -1.98
VPS21YOR089C ROX3P25046 220 aa2.67□□□□□ -1.98
VPS21YOR089C YCR023CP25351 611 aa2.67□□□□□ -1.98
VPS21YOR089C AHT1P29589 182 aa2.67□□□□□ -1.98
VPS21YOR089C YBR220CP38318 560 aa2.67□□□□□ -1.98
VPS21YOR089C YBR292CP38357 123 aa2.67□□□□□ -1.98
VPS21YOR089C DAN1P47178 298 aa2.67□□□□□ -1.98
VPS21YOR089C SBH1P52870 82 aa2.67□□□□□ -1.98
VPS21YOR089C GEP7P53171 287 aa2.67□□□□□ -1.98
VPS21YOR089C SED1Q01589 338 aa2.67□□□□□ -1.98
VPS21YOR089C TMA23Q03525 211 aa2.67□□□□□ -1.98
VPS21YOR089C YMR253CQ04835 414 aa2.67□□□□□ -1.98
VPS21YOR089C PRP11Q07350 266 aaPredicted RBP2.67□□□□□ -1.98
VPS21YOR089C YPD1Q07688 167 aa2.67□□□□□ -1.98
VPS21YOR089C HRD1Q08109 551 aa2.67□□□□□ -1.98
VPS21YOR089C YOR015WQ12169 119 aa2.67□□□□□ -1.98
VPS21YOR089C YPR145C-AQ2V2P0 78 aa2.67□□□□□ -1.98
VPS21YOR089C RPL39P04650 51 aa2.66□□□□□ -1.98
VPS21YOR089C NRG2P38082 220 aa2.66□□□□□ -1.98
VPS21YOR089C PRS3P38689 320 aaKnown RBP2.66□□□□□ -1.98
VPS21YOR089C YGR269WP40326 108 aa2.66□□□□□ -1.98
VPS21YOR089C YJL027CP47063 138 aaPredicted RBP2.66□□□□□ -1.98
VPS21YOR089C MOG1P47123 218 aa2.66□□□□□ -1.98
VPS21YOR089C IRC23Q08416 157 aa2.66□□□□□ -1.98
VPS21YOR089C YMR105W-AQ8TGS8 64 aa2.66□□□□□ -1.98
VPS21YOR089C UPS2P35200 230 aa2.65□□□□□ -1.99
VPS21YOR089C SHB17P36136 271 aaKnown RBP2.65□□□□□ -1.99
VPS21YOR089C KNH1P50112 268 aa2.65□□□□□ -1.99
VPS21YOR089C PKR1Q03880 122 aaKnown RBP2.65□□□□□ -1.99
VPS21YOR089C RAD28Q12021 506 aa2.65□□□□□ -1.99
VPS21YOR089C RAD6P06104 172 aa2.64□□□□□ -1.99
VPS21YOR089C QCR9P22289 66 aa2.64□□□□□ -1.99
VPS21YOR089C PAM17P36147 197 aa2.64□□□□□ -1.99
VPS21YOR089C ATG8P38182 117 aaRIP-Chip data2.64□□□□□ -1.99not detected
VPS21YOR089C YHR138CP38841 114 aaPredicted RBP2.64□□□□□ -1.99
VPS21YOR089C PHS1P40857 217 aa2.64□□□□□ -1.99
VPS21YOR089C VMA21P41806 77 aa2.64□□□□□ -1.99
VPS21YOR089C PAU4P53427 120 aa2.64□□□□□ -1.99
VPS21YOR089C POP3P53833 195 aaPredicted RBP2.64□□□□□ -1.99
VPS21YOR089C RAV2Q03956 351 aa2.64□□□□□ -1.99
VPS21YOR089C AVO2Q04749 426 aa2.64□□□□□ -1.99
VPS21YOR089C FRQ1Q06389 190 aa2.64□□□□□ -1.99
VPS21YOR089C POC4Q12245 148 aaPredicted RBP2.64□□□□□ -1.99
VPS21YOR089C YLR118CQ12354 227 aa2.64□□□□□ -1.99
VPS21YOR089C YGL258W-AQ3E740 77 aa2.64□□□□□ -1.99
VPS21YOR089C RPS25BP0C0T4 108 aaKnown RBP2.63□□□□□ -1.99
VPS21YOR089C PAU1P0CE88 120 aa2.63□□□□□ -1.99
VPS21YOR089C PAU14P0CE89 120 aa2.63□□□□□ -1.99
VPS21YOR089C PAU6P0CE90 120 aa2.63□□□□□ -1.99
VPS21YOR089C PAU18P0CE91 120 aa2.63□□□□□ -1.99
VPS21YOR089C PAU8P0CE92 120 aa2.63□□□□□ -1.99
VPS21YOR089C PAU11P0CE93 120 aa2.63□□□□□ -1.99
VPS21YOR089C SEC11P15367 167 aa2.63□□□□□ -1.99
VPS21YOR089C RPL14AP36105 138 aaKnown RBP2.63□□□□□ -1.99
VPS21YOR089C PAU13P38725 120 aa2.63□□□□□ -1.99
VPS21YOR089C RPL14BP38754 138 aaKnown RBP2.63□□□□□ -1.99
VPS21YOR089C GTT1P40582 234 aa2.63□□□□□ -1.99
VPS21YOR089C PAU15P40585 124 aa2.63□□□□□ -1.99
VPS21YOR089C NSE4P43124 402 aa2.63□□□□□ -1.99
VPS21YOR089C DYN2Q02647 92 aa2.63□□□□□ -1.99
VPS21YOR089C PAU10Q03050 120 aa2.63□□□□□ -1.99
VPS21YOR089C YMR007WQ03675 126 aa2.63□□□□□ -1.99
VPS21YOR089C PAU20Q08322 120 aa2.63□□□□□ -1.99
VPS21YOR089C ATP20Q12233 115 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms