RNA–Protein interactions for RNA: YNL292W

PUS4, Transcript of Pseudouridine synthase, yeast

Gene PUS4, Length 1,212 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS4	YNL292W	ADH3	P07246	375 aa	Known RBP	4.72	□□□□□ -1.65
PUS4	YNL292W	YDR034C-A	P0C289	58 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	TIR1	P10863	254 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	POF1	P25576	258 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	AGA1	P32323	725 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	YGL185C	P53100	379 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	BRP1	P53194	125 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	TIM21	P53220	239 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	YOR105W	Q08504	108 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	DAD1	Q12248	94 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	SMT3	Q12306	101 aa	Known RBP	4.72	□□□□□ -1.65
PUS4	YNL292W	YBR200W-A	Q3E755	54 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	YLR342W-A	Q3E810	57 aa		4.72	□□□□□ -1.65
PUS4	YNL292W	FZF1	P32805	299 aa		4.71	□□□□□ -1.66
PUS4	YNL292W	KTI12	P34253	313 aa	Known RBP	4.71	□□□□□ -1.66
PUS4	YNL292W	MGA1	P53050	456 aa		4.71	□□□□□ -1.66
PUS4	YNL292W	DCN1	Q12395	269 aa		4.71	□□□□□ -1.66
PUS4	YNL292W	STF1	P01098	86 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	RPL33A	P05744	107 aa	Known RBP	4.7	□□□□□ -1.66
PUS4	YNL292W	YJL197C-A	P0C5P0	93 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	ATG8	P38182	117 aa	RIP-Chip data	4.7	□□□□□ -1.66	not detected
PUS4	YNL292W	HSP10	P38910	106 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	RPL33B	P41056	107 aa	Known RBP	4.7	□□□□□ -1.66
PUS4	YNL292W	VMA21	P41806	77 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	YFR045W	P43617	309 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	AIM34	Q03673	198 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	FCF1	Q05498	189 aa	Predicted RBP	4.7	□□□□□ -1.66
PUS4	YNL292W	UTP23	Q12339	254 aa	Known RBP	4.7	□□□□□ -1.66
PUS4	YNL292W	YLR118C	Q12354	227 aa		4.7	□□□□□ -1.66
PUS4	YNL292W	QRI5	P32344	111 aa		4.69	□□□□□ -1.66
PUS4	YNL292W	HOT13	P36078	116 aa		4.69	□□□□□ -1.66
PUS4	YNL292W	DFM1	Q12743	341 aa	Known RBP	4.69	□□□□□ -1.66
PUS4	YNL292W	YCL001W-B	Q96VH2	84 aa		4.69	□□□□□ -1.66
PUS4	YNL292W	NHP6A	P11632	93 aa	Known RBP	4.68	□□□□□ -1.66
PUS4	YNL292W	YCR023C	P25351	611 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	PGD1	P40356	397 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	PAU15	P40585	124 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	MOG1	P47123	218 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	GIM5	Q04493	163 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	YLR042C	Q07990	161 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	DGA1	Q08650	418 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	YOP1	Q12402	180 aa		4.68	□□□□□ -1.66
PUS4	YNL292W	MRPL31	P14063	131 aa	Predicted RBP	4.67	□□□□□ -1.66
PUS4	YNL292W	YGL010W	P25338	174 aa		4.67	□□□□□ -1.66
PUS4	YNL292W	COX16	P47081	118 aa		4.67	□□□□□ -1.66
PUS4	YNL292W	DAN1	P47178	298 aa		4.67	□□□□□ -1.66
PUS4	YNL292W	APS2	Q00381	147 aa		4.67	□□□□□ -1.66
PUS4	YNL292W	UPS3	Q04006	179 aa		4.67	□□□□□ -1.66
PUS4	YNL292W	YDR115W	Q04598	105 aa		4.67	□□□□□ -1.66
PUS4	YNL292W	RPL12A	P0CX53	165 aa	Known RBP	4.66	□□□□□ -1.66
PUS4	YNL292W	RPL12B	P0CX54	165 aa		4.66	□□□□□ -1.66
PUS4	YNL292W	MIX23	P38162	196 aa		4.66	□□□□□ -1.66
PUS4	YNL292W	HHO1	P53551	258 aa		4.66	□□□□□ -1.66
PUS4	YNL292W	TIM22	Q12328	207 aa		4.66	□□□□□ -1.66
PUS4	YNL292W	HMRA1	P0CY11	126 aa		4.65	□□□□□ -1.67
PUS4	YNL292W	DAD2	P36162	133 aa		4.65	□□□□□ -1.67
PUS4	YNL292W	RPB11	P38902	120 aa		4.65	□□□□□ -1.67
PUS4	YNL292W	YGR026W	P53217	278 aa		4.65	□□□□□ -1.67
PUS4	YNL292W	DIA1	P54005	336 aa		4.65	□□□□□ -1.67
PUS4	YNL292W	SNU23	Q12368	194 aa	Predicted RBP	4.65	□□□□□ -1.67
PUS4	YNL292W	YNR034W-A	Q3E841	98 aa		4.65	□□□□□ -1.67
PUS4	YNL292W	YAR023C	D6VPM8	179 aa		4.64	□□□□□ -1.67
PUS4	YNL292W	PAM17	P36147	197 aa		4.64	□□□□□ -1.67
PUS4	YNL292W	NSE4	P43124	402 aa		4.64	□□□□□ -1.67
PUS4	YNL292W	PAU5	P43575	122 aa		4.64	□□□□□ -1.67
PUS4	YNL292W	CSM4	Q08955	156 aa		4.64	□□□□□ -1.67
PUS4	YNL292W	YGR017W	P53210	297 aa		4.63	□□□□□ -1.67
PUS4	YNL292W	YMR320W	Q04897	101 aa		4.63	□□□□□ -1.67
PUS4	YNL292W	ZEO1	Q08245	113 aa		4.63	□□□□□ -1.67
PUS4	YNL292W	YBR013C	P38215	129 aa		4.62	□□□□□ -1.67
PUS4	YNL292W	SUR2	P38992	349 aa		4.62	□□□□□ -1.67
PUS4	YNL292W	PAU7	P39545	55 aa		4.62	□□□□□ -1.67
PUS4	YNL292W	THG1	P53215	237 aa	Known RBP	4.62	□□□□□ -1.67
PUS4	YNL292W	ARC18	Q05933	178 aa	Known RBP	4.62	□□□□□ -1.67
PUS4	YNL292W	ERI1	P62651	68 aa	Known RBP	4.61	□□□□□ -1.67
PUS4	YNL292W	GPI19	Q04082	140 aa		4.61	□□□□□ -1.67
PUS4	YNL292W	YLR307C-A	Q3E825	87 aa		4.61	□□□□□ -1.67
PUS4	YNL292W	RPL27A	P0C2H6	136 aa	Known RBP	4.6	□□□□□ -1.67
PUS4	YNL292W	PAU19	P0CE85	124 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	PAU21	P0CE86	164 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	PAU22	P0CE87	164 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	PAU3	P25610	124 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	ZRT1	P32804	376 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	YHR140W	P38842	239 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	YIL059C	P40520	121 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	GTT1	P40582	234 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	SDS23	P53172	527 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	BET5	Q03630	159 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	GTO3	Q04806	366 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	DXO1	Q06349	442 aa		4.6	□□□□□ -1.67
PUS4	YNL292W	UBC5	P15732	148 aa		4.59	□□□□□ -1.67
PUS4	YNL292W	PMP3	P87284	55 aa		4.59	□□□□□ -1.67
PUS4	YNL292W	YLR112W	Q12130	139 aa		4.59	□□□□□ -1.67
PUS4	YNL292W	POM33	Q12164	279 aa		4.59	□□□□□ -1.67
PUS4	YNL292W	YMR122W-A	Q3E842	84 aa		4.59	□□□□□ -1.67
PUS4	YNL292W	YPR010C-A	A5Z2X5	72 aa		4.58	□□□□□ -1.68
PUS4	YNL292W	RPL23A	P0CX41	137 aa	Known RBP	4.58	□□□□□ -1.68
PUS4	YNL292W	RPL23B	P0CX42	137 aa	Known RBP	4.58	□□□□□ -1.68
PUS4	YNL292W	TEM1	P38987	245 aa		4.58	□□□□□ -1.68
PUS4	YNL292W	TIM11	P81449	96 aa	Predicted RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms