RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YOR304C-AO14468 76 aa2.78□□□□□ -1.96
SHH3YMR118C PFY1P07274 126 aa2.78□□□□□ -1.96
SHH3YMR118C HMRA2P0CY13 119 aa2.78□□□□□ -1.96
SHH3YMR118C YKL070WP36087 169 aa2.78□□□□□ -1.96
SHH3YMR118C RPL32P38061 130 aaKnown RBP2.78□□□□□ -1.96
SHH3YMR118C OXA1P39952 402 aa2.78□□□□□ -1.96
SHH3YMR118C NRM1P53718 249 aa2.78□□□□□ -1.96
SHH3YMR118C HPA2Q06592 156 aa2.78□□□□□ -1.96
SHH3YMR118C GAT3Q07928 141 aa2.78□□□□□ -1.96
SHH3YMR118C YPL261CQ08976 102 aa2.78□□□□□ -1.96
SHH3YMR118C YOR097CQ12274 175 aaPredicted RBP2.78□□□□□ -1.96
SHH3YMR118C FOL3Q12676 427 aaPredicted RBP2.78□□□□□ -1.96
SHH3YMR118C ISD11Q6Q560 94 aa2.78□□□□□ -1.96
SHH3YMR118C YMR105W-AQ8TGS8 64 aa2.78□□□□□ -1.96
SHH3YMR118C UTH1P36135 365 aa2.77□□□□□ -1.97
SHH3YMR118C YKR045CP36138 183 aa2.77□□□□□ -1.97
SHH3YMR118C YEL067CP39978 195 aa2.77□□□□□ -1.97
SHH3YMR118C YNL217WP40152 326 aa2.77□□□□□ -1.97
SHH3YMR118C TOS6P48560 102 aa2.77□□□□□ -1.97
SHH3YMR118C EOS1P53938 366 aa2.77□□□□□ -1.97
SHH3YMR118C UBC7Q02159 165 aa2.77□□□□□ -1.97
SHH3YMR118C YTH1Q06102 208 aaPredicted RBP2.77□□□□□ -1.97
SHH3YMR118C LSM6Q06406 86 aaKnown RBP2.77□□□□□ -1.97
SHH3YMR118C MSA1Q08471 629 aa2.77□□□□□ -1.97
SHH3YMR118C TIM22Q12328 207 aa2.77□□□□□ -1.97
SHH3YMR118C COA3Q3E7B2 85 aa2.77□□□□□ -1.97
SHH3YMR118C COX10P21592 462 aa2.76□□□□□ -1.97
SHH3YMR118C RPA12P32529 125 aaKnown RBP2.76□□□□□ -1.97
SHH3YMR118C KTI12P34253 313 aaKnown RBP2.76□□□□□ -1.97
SHH3YMR118C YJL027CP47063 138 aaPredicted RBP2.76□□□□□ -1.97
SHH3YMR118C YIP3P53633 176 aa2.76□□□□□ -1.97
SHH3YMR118C YNR077CP53758 84 aa2.76□□□□□ -1.97
SHH3YMR118C YDR034W-BQ6Q5X2 51 aa2.76□□□□□ -1.97
SHH3YMR118C IGO2Q9P305 131 aa2.76□□□□□ -1.97
SHH3YMR118C ADH5P38113 351 aaKnown RBP2.75□□□□□ -1.97
SHH3YMR118C YHR130CP38834 111 aa2.75□□□□□ -1.97
SHH3YMR118C GLE2P40066 365 aa2.75□□□□□ -1.97
SHH3YMR118C SPI1P40092 148 aa2.75□□□□□ -1.97
SHH3YMR118C YFR057WP43625 151 aa2.75□□□□□ -1.97
SHH3YMR118C YMR181CQ03231 154 aa2.75□□□□□ -1.97
SHH3YMR118C SNA4Q07549 140 aa2.75□□□□□ -1.97
SHH3YMR118C YDL009CQ12210 107 aa2.75□□□□□ -1.97
SHH3YMR118C JID1Q12350 301 aa2.75□□□□□ -1.97
SHH3YMR118C YDL022C-AP0C5L6 82 aa2.74□□□□□ -1.97
SHH3YMR118C AGA1P32323 725 aa2.74□□□□□ -1.97
SHH3YMR118C MRPL38P35996 138 aaPredicted RBP2.74□□□□□ -1.97
SHH3YMR118C CTR2P38865 189 aa2.74□□□□□ -1.97
SHH3YMR118C VHS2P40463 436 aa2.74□□□□□ -1.97
SHH3YMR118C YNL046WP53956 172 aa2.74□□□□□ -1.97
SHH3YMR118C AIM11P87275 137 aa2.74□□□□□ -1.97
SHH3YMR118C YPL080CQ02826 108 aa2.74□□□□□ -1.97
SHH3YMR118C YLR194CQ05777 254 aa2.74□□□□□ -1.97
SHH3YMR118C IRC23Q08416 157 aa2.74□□□□□ -1.97
SHH3YMR118C YOR008C-AQ3E7B9 74 aa2.74□□□□□ -1.97
SHH3YMR118C FAB1P34756 2278 aa2.73□□□□□ -1.97
SHH3YMR118C RPL42AP0CX27 106 aaKnown RBP2.73□□□□□ -1.97
SHH3YMR118C RPL42BP0CX28 106 aaKnown RBP2.73□□□□□ -1.97
SHH3YMR118C KRE1P17260 313 aa2.73□□□□□ -1.97
SHH3YMR118C YCR085WP25650 117 aa2.73□□□□□ -1.97
SHH3YMR118C VTC1P40046 129 aaRIP-Chip data2.73□□□□□ -1.97not detected
SHH3YMR118C YER085CP40058 173 aa2.73□□□□□ -1.97
SHH3YMR118C YER121WP40076 114 aa2.73□□□□□ -1.97
SHH3YMR118C POR2P40478 281 aa2.73□□□□□ -1.97
SHH3YMR118C SGN1P40561 250 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
SHH3YMR118C YFL051CP43552 160 aa2.73□□□□□ -1.97
SHH3YMR118C GLO1P50107 326 aa2.73□□□□□ -1.97
SHH3YMR118C DUO1P53168 247 aaKnown RBP2.73□□□□□ -1.97
SHH3YMR118C YNL234WP53857 426 aa2.73□□□□□ -1.97
SHH3YMR118C SED1Q01589 338 aa2.73□□□□□ -1.97
SHH3YMR118C AIM34Q03673 198 aa2.73□□□□□ -1.97
SHH3YMR118C YOL160WQ08321 113 aa2.73□□□□□ -1.97
SHH3YMR118C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
SHH3YMR118C CCW14O13547 238 aa2.72□□□□□ -1.97
SHH3YMR118C RPS8AP0CX39 200 aaKnown RBP2.72□□□□□ -1.97
SHH3YMR118C RPS8BP0CX40 200 aaKnown RBP2.72□□□□□ -1.97
SHH3YMR118C IES6P32617 166 aa2.72□□□□□ -1.97
SHH3YMR118C MRPL49P40858 161 aaPredicted RBP2.72□□□□□ -1.97
SHH3YMR118C FIP1P45976 327 aa2.72□□□□□ -1.97
SHH3YMR118C ABF2Q02486 183 aa2.72□□□□□ -1.97
SHH3YMR118C RRG8Q06109 277 aa2.72□□□□□ -1.97
SHH3YMR118C PBP4Q07362 185 aaKnown RBP2.72□□□□□ -1.97
SHH3YMR118C MRPL23Q12487 163 aaPredicted RBP2.72□□□□□ -1.97
SHH3YMR118C YIR021W-AQ3E739 70 aa2.72□□□□□ -1.97
SHH3YMR118C YAL063C-AQ3E791 96 aa2.72□□□□□ -1.97
SHH3YMR118C YFL041W-AQ3E817 63 aa2.72□□□□□ -1.97
SHH3YMR118C TOM1Q03280 3268 aa2.72□□□□□ -1.97
SHH3YMR118C TAO3P40468 2376 aa2.71□□□□□ -1.98
SHH3YMR118C PHO85P17157 305 aa2.71□□□□□ -1.98
SHH3YMR118C ATP15P21306 62 aa2.71□□□□□ -1.98
SHH3YMR118C LDB16P25587 256 aa2.71□□□□□ -1.98
SHH3YMR118C TOA2P32774 122 aa2.71□□□□□ -1.98
SHH3YMR118C YHL037CP38733 133 aa2.71□□□□□ -1.98
SHH3YMR118C DSE2P38844 325 aa2.71□□□□□ -1.98
SHH3YMR118C LCB3P47013 409 aa2.71□□□□□ -1.98
SHH3YMR118C YGR219WP53307 113 aa2.71□□□□□ -1.98
SHH3YMR118C FCY1Q12178 158 aa2.71□□□□□ -1.98
SHH3YMR118C PRM7Q12459 698 aa2.71□□□□□ -1.98
SHH3YMR118C YPL229WQ99395 206 aa2.71□□□□□ -1.98
SHH3YMR118C RPL28P02406 149 aaKnown RBP2.7□□□□□ -1.98
SHH3YMR118C RPL18AP0CX49 186 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms