RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C KSH1Q8TGJ3 72 aa3.92□□□□□ -1.78
NUP116YMR047C VHS2P40463 436 aa3.92□□□□□ -1.78
NUP116YMR047C TOS8P53147 276 aa3.92□□□□□ -1.78
NUP116YMR047C YPR071WQ12346 211 aa3.92□□□□□ -1.78
NUP116YMR047C MPD1Q12404 318 aaKnown RBP3.92□□□□□ -1.78
NUP116YMR047C YMR105W-AQ8TGS8 64 aa3.92□□□□□ -1.78
NUP116YMR047C YHR139C-AO13536 103 aa3.91□□□□□ -1.78
NUP116YMR047C MTC7P32633 139 aa3.91□□□□□ -1.78
NUP116YMR047C SNF11P38956 169 aa3.91□□□□□ -1.78
NUP116YMR047C CAX4P53223 239 aa3.91□□□□□ -1.78
NUP116YMR047C ALG9P53868 555 aaKnown RBP3.91□□□□□ -1.78
NUP116YMR047C MRX11Q03079 207 aa3.91□□□□□ -1.78
NUP116YMR047C CSH1P38287 376 aa3.91□□□□□ -1.78
NUP116YMR047C PHS1P40857 217 aa3.91□□□□□ -1.78
NUP116YMR047C HST4P53688 370 aa3.91□□□□□ -1.78
NUP116YMR047C YAL063C-AQ3E791 96 aa3.91□□□□□ -1.78
NUP116YMR047C YCL021W-AQ96VH3 125 aa3.91□□□□□ -1.78
NUP116YMR047C SEC16P48415 2195 aaKnown RBP3.9□□□□□ -1.78
NUP116YMR047C YHR140WP38842 239 aa3.9□□□□□ -1.78
NUP116YMR047C MBB1P39534 108 aa3.9□□□□□ -1.78
NUP116YMR047C RPL39P04650 51 aa3.9□□□□□ -1.79
NUP116YMR047C SMP1P38128 452 aa3.9□□□□□ -1.79
NUP116YMR047C MIX17Q03667 156 aa3.9□□□□□ -1.79
NUP116YMR047C RIM9Q04734 239 aa3.9□□□□□ -1.79
NUP116YMR047C AYT1Q12226 474 aa3.9□□□□□ -1.79
NUP116YMR047C YLL053CP0CD98 152 aa3.9□□□□□ -1.79
NUP116YMR047C YPL073CP40323 161 aa3.9□□□□□ -1.79
NUP116YMR047C YNL277W-AQ3E7Z0 62 aa3.9□□□□□ -1.79
NUP116YMR047C TRP1P00912 224 aa3.89□□□□□ -1.79
NUP116YMR047C RPS8AP0CX39 200 aaKnown RBP3.89□□□□□ -1.79
NUP116YMR047C RPS8BP0CX40 200 aaKnown RBP3.89□□□□□ -1.79
NUP116YMR047C MRS3P10566 314 aa3.89□□□□□ -1.79
NUP116YMR047C NRG2P38082 220 aa3.89□□□□□ -1.79
NUP116YMR047C MIC27P50945 234 aa3.89□□□□□ -1.79
NUP116YMR047C MST27P53176 234 aa3.89□□□□□ -1.79
NUP116YMR047C SME1Q12330 94 aaPredicted RBP3.89□□□□□ -1.79
NUP116YMR047C NHP2P32495 156 aaPredicted RBP3.88□□□□□ -1.79
NUP116YMR047C CPD1P53314 239 aa3.88□□□□□ -1.79
NUP116YMR047C IRC25Q07951 179 aa3.88□□□□□ -1.79
NUP116YMR047C RPA12P32529 125 aaKnown RBP3.88□□□□□ -1.79
NUP116YMR047C AGA2P32781 87 aa3.88□□□□□ -1.79
NUP116YMR047C FSH2Q05015 223 aa3.88□□□□□ -1.79
NUP116YMR047C YDL009CQ12210 107 aa3.88□□□□□ -1.79
NUP116YMR047C YGR035W-AQ45U48 73 aa3.88□□□□□ -1.79
NUP116YMR047C BPH1P25356 2167 aa3.88□□□□□ -1.79
NUP116YMR047C RPL28P02406 149 aaKnown RBP3.87□□□□□ -1.79
NUP116YMR047C RAD6P06104 172 aa3.87□□□□□ -1.79
NUP116YMR047C HNT2P49775 206 aa3.87□□□□□ -1.79
NUP116YMR047C YMR090WQ04304 227 aaKnown RBP3.87□□□□□ -1.79
NUP116YMR047C IMP1P28627 190 aa3.87□□□□□ -1.79
NUP116YMR047C YOR186WQ08560 144 aa3.87□□□□□ -1.79
NUP116YMR047C DFM1Q12743 341 aaKnown RBP3.87□□□□□ -1.79
NUP116YMR047C KRE1P17260 313 aa3.87□□□□□ -1.79
NUP116YMR047C CTR2P38865 189 aa3.87□□□□□ -1.79
NUP116YMR047C BOL1Q3E793 110 aa3.87□□□□□ -1.79
NUP116YMR047C KTI11Q3E840 82 aa3.87□□□□□ -1.79
NUP116YMR047C YLR365WQ7LIF2 110 aa3.87□□□□□ -1.79
NUP116YMR047C VPS55P47111 140 aa3.86□□□□□ -1.79
NUP116YMR047C ASM4Q05166 528 aa3.86□□□□□ -1.79
NUP116YMR047C ODC2Q99297 307 aa3.86□□□□□ -1.79
NUP116YMR047C SRL1Q08673 210 aa3.86□□□□□ -1.79
NUP116YMR047C YOR268CQ08734 132 aa3.86□□□□□ -1.79
NUP116YMR047C FIP1P45976 327 aa3.85□□□□□ -1.79
NUP116YMR047C SPO13P23624 291 aa3.85□□□□□ -1.79
NUP116YMR047C RPB7P34087 171 aa3.85□□□□□ -1.79
NUP116YMR047C PIR5P46999 287 aa3.85□□□□□ -1.79
NUP116YMR047C YGR045CP53229 120 aa3.85□□□□□ -1.79
NUP116YMR047C ATP23P53722 227 aa3.85□□□□□ -1.79
NUP116YMR047C SWT21P53873 357 aaPredicted RBP3.85□□□□□ -1.79
NUP116YMR047C HPA2Q06592 156 aa3.85□□□□□ -1.79
NUP116YMR047C YOR385WQ08909 290 aa3.85□□□□□ -1.79
NUP116YMR047C YNL200CP40165 246 aaKnown RBP3.84□□□□□ -1.79
NUP116YMR047C SPG4Q04438 115 aa3.84□□□□□ -1.79
NUP116YMR047C PAU1P0CE88 120 aa3.84□□□□□ -1.79
NUP116YMR047C PAU14P0CE89 120 aa3.84□□□□□ -1.79
NUP116YMR047C PAU6P0CE90 120 aa3.84□□□□□ -1.79
NUP116YMR047C PAU18P0CE91 120 aa3.84□□□□□ -1.79
NUP116YMR047C PAU8P0CE92 120 aa3.84□□□□□ -1.79
NUP116YMR047C PAU11P0CE93 120 aa3.84□□□□□ -1.79
NUP116YMR047C ERG2P32352 222 aa3.84□□□□□ -1.79
NUP116YMR047C PAU13P38725 120 aa3.84□□□□□ -1.79
NUP116YMR047C PAU10Q03050 120 aa3.84□□□□□ -1.79
NUP116YMR047C YOL029CQ08187 201 aa3.84□□□□□ -1.79
NUP116YMR047C PAU20Q08322 120 aa3.84□□□□□ -1.79
NUP116YMR047C YOR292CQ08743 309 aa3.84□□□□□ -1.79
NUP116YMR047C PAU9Q3E770 120 aa3.84□□□□□ -1.79
NUP116YMR047C IGO2Q9P305 131 aa3.84□□□□□ -1.79
NUP116YMR047C YFL019CP43576 117 aa3.83□□□□□ -1.8
NUP116YMR047C YLR412C-AQ3E742 68 aa3.83□□□□□ -1.8
NUP116YMR047C MIC10Q96VH5 97 aa3.83□□□□□ -1.8
NUP116YMR047C YMR316C-AI2HB70 103 aa3.83□□□□□ -1.8
NUP116YMR047C YHL018WP38744 120 aaPredicted RBP3.83□□□□□ -1.8
NUP116YMR047C DFG10P40526 253 aa3.83□□□□□ -1.8
NUP116YMR047C PAU4P53427 120 aa3.83□□□□□ -1.8
NUP116YMR047C LPP1Q04396 274 aa3.83□□□□□ -1.8
NUP116YMR047C MRPL27P36526 146 aaPredicted RBP3.83□□□□□ -1.8
NUP116YMR047C YIL014C-AQ02598 104 aa3.83□□□□□ -1.8
NUP116YMR047C QRI5P32344 111 aa3.82□□□□□ -1.8
NUP116YMR047C YPR108W-AQ3E7B3 70 aa3.82□□□□□ -1.8
NUP116YMR047C YFL041W-AQ3E817 63 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 123 ms