RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C CMC4Q3E7A9 73 aa1.71□□□□□ -2.14
SUB1YMR039C KSH1Q8TGJ3 72 aa1.71□□□□□ -2.14
SUB1YMR039C TY1B-DR5P0C2I2 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-DR6P0C2I3 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-LR2P0C2I5 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-LR3P0C2I6 1755 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C TY1B-PR1P0C2I9 1755 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C TY1B-PR3P0C2J1 1755 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C TY1B-JR1P47098 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-ML2Q03434 1755 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C TY1B-ER1Q03612 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-ML1Q04711 1755 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C TY1B-GR2Q12269 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-OLQ12273 1755 aa1.7□□□□□ -2.14
SUB1YMR039C TY1B-PLQ12414 1755 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C UBC4P15731 148 aa1.7□□□□□ -2.14
SUB1YMR039C QCR10P37299 77 aa1.7□□□□□ -2.14
SUB1YMR039C SNF11P38956 169 aa1.7□□□□□ -2.14
SUB1YMR039C YMR090WQ04304 227 aaKnown RBP1.7□□□□□ -2.14
SUB1YMR039C FIT1Q04433 528 aa1.7□□□□□ -2.14
SUB1YMR039C HMRA1P0CY11 126 aa1.69□□□□□ -2.14
SUB1YMR039C YCL042WP25572 119 aa1.69□□□□□ -2.14
SUB1YMR039C HSP150P32478 413 aa1.69□□□□□ -2.14
SUB1YMR039C TDA2P40045 126 aa1.69□□□□□ -2.14
SUB1YMR039C YGL149WP53116 101 aa1.69□□□□□ -2.14
SUB1YMR039C YMR082CQ04276 118 aa1.69□□□□□ -2.14
SUB1YMR039C MHF1Q3E835 90 aa1.69□□□□□ -2.14
SUB1YMR039C YLR365WQ7LIF2 110 aa1.69□□□□□ -2.14
SUB1YMR039C MIC10Q96VH5 97 aa1.69□□□□□ -2.14
SUB1YMR039C HSP10P38910 106 aa1.68□□□□□ -2.14
SUB1YMR039C ERV14P53173 138 aa1.68□□□□□ -2.14
SUB1YMR039C SEN15Q04675 128 aa1.68□□□□□ -2.14
SUB1YMR039C VAM10Q08474 114 aa1.68□□□□□ -2.14
SUB1YMR039C YDR029WQ12111 104 aa1.68□□□□□ -2.14
SUB1YMR039C FAS2P19097 1887 aaKnown RBP1.68□□□□□ -2.14
SUB1YMR039C ESP1Q03018 1630 aa1.68□□□□□ -2.14
SUB1YMR039C SWR1Q05471 1514 aa1.67□□□□□ -2.14
SUB1YMR039C TY1B-DR4Q07793 1604 aa1.67□□□□□ -2.14
SUB1YMR039C RPL40AP0CH08 128 aaKnown RBP1.67□□□□□ -2.14
SUB1YMR039C RPL40BP0CH09 128 aaKnown RBP1.67□□□□□ -2.14
SUB1YMR039C FUN14P18411 198 aa1.67□□□□□ -2.14
SUB1YMR039C GTT1P40582 234 aa1.67□□□□□ -2.14
SUB1YMR039C YPL067CQ02754 198 aa1.67□□□□□ -2.14
SUB1YMR039C GPI19Q04082 140 aa1.67□□□□□ -2.14
SUB1YMR039C SWC7Q06707 132 aa1.67□□□□□ -2.14
SUB1YMR039C FIT3Q08907 204 aa1.67□□□□□ -2.14
SUB1YMR039C YPK9Q12697 1472 aa1.67□□□□□ -2.14
SUB1YMR039C SRB6P32570 121 aa1.66□□□□□ -2.14
SUB1YMR039C ATG8P38182 117 aaRIP-Chip data1.66□□□□□ -2.14not detected
SUB1YMR039C YER187WP40102 141 aa1.66□□□□□ -2.14
SUB1YMR039C EMC5P40540 141 aa1.66□□□□□ -2.14
SUB1YMR039C DCV1P43595 202 aa1.66□□□□□ -2.14
SUB1YMR039C RRT15Q3E811 62 aa1.66□□□□□ -2.14
SUB1YMR039C YOS1Q3E834 85 aa1.66□□□□□ -2.14
SUB1YMR039C MLP1Q02455 1875 aaKnown RBP1.65□□□□□ -2.14
SUB1YMR039C PAU21P0CE86 164 aa1.65□□□□□ -2.15
SUB1YMR039C PAU22P0CE87 164 aa1.65□□□□□ -2.15
SUB1YMR039C YBR027CP38220 110 aa1.65□□□□□ -2.15
SUB1YMR039C MSL1P40567 111 aaPredicted RBP1.65□□□□□ -2.15
SUB1YMR039C BRP1P53194 125 aa1.65□□□□□ -2.15
SUB1YMR039C PAU12P53343 120 aa1.65□□□□□ -2.15
SUB1YMR039C MIX14Q04341 121 aa1.65□□□□□ -2.15
SUB1YMR039C YPR203WQ08994 102 aa1.65□□□□□ -2.15
SUB1YMR039C LAA1P39526 2014 aa1.65□□□□□ -2.15
SUB1YMR039C TY1B-JR2P47100 1755 aaKnown RBP1.64□□□□□ -2.15
SUB1YMR039C TY1B-ER2Q03619 1755 aa1.64□□□□□ -2.15
SUB1YMR039C TY1B-MR1Q04214 1755 aa1.64□□□□□ -2.15
SUB1YMR039C TY1B-MR2Q04670 1755 aaKnown RBP1.64□□□□□ -2.15
SUB1YMR039C TY1B-LR1Q12088 1755 aaKnown RBP1.64□□□□□ -2.15
SUB1YMR039C TY1B-NL1Q12112 1755 aa1.64□□□□□ -2.15
SUB1YMR039C TY1B-GR1Q12141 1755 aa1.64□□□□□ -2.15
SUB1YMR039C TY1B-BLQ12490 1755 aa1.64□□□□□ -2.15
SUB1YMR039C ECM12O13529 151 aa1.64□□□□□ -2.15
SUB1YMR039C MRPL11P36521 249 aaPredicted RBP1.64□□□□□ -2.15
SUB1YMR039C HUR1P45820 110 aa1.64□□□□□ -2.15
SUB1YMR039C RSM19P53733 91 aaPredicted RBP1.64□□□□□ -2.15
SUB1YMR039C YPL261CQ08976 102 aa1.64□□□□□ -2.15
SUB1YMR039C DNA2P38859 1522 aa1.63□□□□□ -2.15
SUB1YMR039C RTC6O14464 93 aa1.63□□□□□ -2.15
SUB1YMR039C RPL33AP05744 107 aaKnown RBP1.63□□□□□ -2.15
SUB1YMR039C YHR212W-AP0CX91 67 aa1.63□□□□□ -2.15
SUB1YMR039C PAU2P32612 120 aa1.63□□□□□ -2.15
SUB1YMR039C YFL051CP43552 160 aa1.63□□□□□ -2.15
SUB1YMR039C SED1Q01589 338 aa1.63□□□□□ -2.15
SUB1YMR039C YLR296WQ05898 108 aa1.63□□□□□ -2.15
SUB1YMR039C COA6Q3E846 104 aa1.63□□□□□ -2.15
SUB1YMR039C DOP1Q03921 1698 aa1.63□□□□□ -2.15
SUB1YMR039C BPT1P14772 1559 aa1.63□□□□□ -2.15
SUB1YMR039C NUP159P40477 1460 aa1.63□□□□□ -2.15
SUB1YMR039C ROM2P51862 1356 aaKnown RBP1.62□□□□□ -2.15
SUB1YMR039C AQY2P0CD90 149 aa1.62□□□□□ -2.15
SUB1YMR039C PAU24P38155 120 aa1.62□□□□□ -2.15
SUB1YMR039C YIR020CP40575 100 aa1.62□□□□□ -2.15
SUB1YMR039C SCC2Q04002 1493 aa1.62□□□□□ -2.15
SUB1YMR039C TCB3Q03640 1545 aaKnown RBP1.61□□□□□ -2.15
SUB1YMR039C GDB1Q06625 1536 aa1.61□□□□□ -2.15
SUB1YMR039C ECM29P38737 1868 aa1.61□□□□□ -2.15
SUB1YMR039C YGL014C-AP0C5N1 53 aa1.61□□□□□ -2.15
SUB1YMR039C YJL197C-AP0C5P0 93 aa1.61□□□□□ -2.15
SUB1YMR039C YHR213WP0CI67 198 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms