RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W YFR035CP43608 114 aa1.8□□□□□ -2.12
YML040WYML040W TRM732Q03496 1420 aa1.8□□□□□ -2.12
YML040WYML040W MED11Q99278 115 aa1.8□□□□□ -2.12
YML040WYML040W MVB12P42939 101 aa1.79□□□□□ -2.12
YML040WYML040W YOR304C-AO14468 76 aa1.78□□□□□ -2.12
YML040WYML040W YIL163CP40448 117 aa1.78□□□□□ -2.12
YML040WYML040W PAM16P42949 149 aa1.77□□□□□ -2.13
YML040WYML040W RPL37BP51402 88 aaKnown RBP1.77□□□□□ -2.13
YML040WYML040W YOR097CQ12274 175 aaPredicted RBP1.77□□□□□ -2.13
YML040WYML040W YHR213W-BQ8TGK1 99 aa1.77□□□□□ -2.13
YML040WYML040W YER188C-AP0C0V2 99 aa1.76□□□□□ -2.13
YML040WYML040W YIR021W-AQ3E739 70 aa1.76□□□□□ -2.13
YML040WYML040W YCR099CP25657 155 aa1.75□□□□□ -2.13
YML040WYML040W YPL261CQ08976 102 aa1.75□□□□□ -2.13
YML040WYML040W RUB1Q03919 77 aa1.74□□□□□ -2.13
YML040WYML040W FIT3Q08907 204 aa1.74□□□□□ -2.13
YML040WYML040W OST5Q92316 86 aa1.74□□□□□ -2.13
YML040WYML040W EMP24P32803 203 aaKnown RBP1.73□□□□□ -2.13
YML040WYML040W COA6Q3E846 104 aa1.73□□□□□ -2.13
YML040WYML040W HUG1Q6Q5K6 68 aa1.73□□□□□ -2.13
YML040WYML040W ENV10Q99382 181 aa1.73□□□□□ -2.13
YML040WYML040W RPL22AP05749 121 aaKnown RBP1.72□□□□□ -2.13
YML040WYML040W YJL197C-AP0C5P0 93 aa1.72□□□□□ -2.13
YML040WYML040W CYB5P40312 120 aa1.72□□□□□ -2.13
YML040WYML040W RTR2Q12378 196 aa1.72□□□□□ -2.13
YML040WYML040W PCC1Q3E833 88 aa1.72□□□□□ -2.13
YML040WYML040W ECM5Q03214 1411 aa1.72□□□□□ -2.13
YML040WYML040W PAU2P32612 120 aa1.71□□□□□ -2.14
YML040WYML040W LHP1P33399 275 aaKnown RBP1.71□□□□□ -2.14
YML040WYML040W COX23P38824 151 aa1.71□□□□□ -2.14
YML040WYML040W YMR141CP40211 102 aa1.71□□□□□ -2.14
YML040WYML040W ARL3Q02804 198 aa1.71□□□□□ -2.14
YML040WYML040W YLR285C-AQ3E771 56 aa1.71□□□□□ -2.14
YML040WYML040W PAU24P38155 120 aa1.7□□□□□ -2.14
YML040WYML040W YER187WP40102 141 aa1.7□□□□□ -2.14
YML040WYML040W TY4B-JP47024 1803 aa1.69□□□□□ -2.14
YML040WYML040W YER039C-AP0CD97 72 aa1.68□□□□□ -2.14
YML040WYML040W SRX1P36077 127 aa1.68□□□□□ -2.14
YML040WYML040W DAD1Q12248 94 aa1.68□□□□□ -2.14
YML040WYML040W MRPL31P14063 131 aaPredicted RBP1.67□□□□□ -2.14
YML040WYML040W SNN1P48232 102 aa1.67□□□□□ -2.14
YML040WYML040W RPL22BP56628 122 aaKnown RBP1.67□□□□□ -2.14
YML040WYML040W HMRA2P0CY13 119 aa1.66□□□□□ -2.14
YML040WYML040W POR2P40478 281 aa1.66□□□□□ -2.14
YML040WYML040W YLR365WQ7LIF2 110 aa1.66□□□□□ -2.14
YML040WYML040W SPP41P38904 1435 aa1.64□□□□□ -2.15
YML040WYML040W PAU19P0CE85 124 aa1.64□□□□□ -2.15
YML040WYML040W PAU3P25610 124 aa1.64□□□□□ -2.15
YML040WYML040W YIR020CP40575 100 aa1.64□□□□□ -2.15
YML040WYML040W YLR363W-AQ3E747 85 aa1.63□□□□□ -2.15
YML040WYML040W LAA1P39526 2014 aa1.62□□□□□ -2.15
YML040WYML040W DNA2P38859 1522 aa1.62□□□□□ -2.15
YML040WYML040W YER137CP40083 148 aaKnown RBP1.62□□□□□ -2.15
YML040WYML040W YMR321CQ04898 105 aa1.62□□□□□ -2.15
YML040WYML040W YGL041C-BQ3E750 60 aa1.62□□□□□ -2.15
YML040WYML040W YEA6P39953 335 aa1.61□□□□□ -2.15
YML040WYML040W YGR240C-AQ3E786 66 aa1.61□□□□□ -2.15
YML040WYML040W RPL43AP0CX25 92 aaKnown RBP1.6□□□□□ -2.15
YML040WYML040W RPL43BP0CX26 92 aa1.6□□□□□ -2.15
YML040WYML040W GTT1P40582 234 aa1.6□□□□□ -2.15
YML040WYML040W ICS3P47034 131 aa1.6□□□□□ -2.15
YML040WYML040W VPS55P47111 140 aa1.6□□□□□ -2.15
YML040WYML040W LCL1Q02786 101 aa1.6□□□□□ -2.15
YML040WYML040W OCA6Q12454 224 aa1.6□□□□□ -2.15
YML040WYML040W YOR034C-AQ3E735 80 aa1.59□□□□□ -2.16
YML040WYML040W YRF1-3P0CX14 1859 aa1.58□□□□□ -2.16
YML040WYML040W YRF1-7P0CX15 1859 aa1.58□□□□□ -2.16
YML040WYML040W BUD23P25627 275 aaPredicted RBP1.58□□□□□ -2.16
YML040WYML040W YJR128WP47162 119 aa1.57□□□□□ -2.16
YML040WYML040W MRPS12P53732 153 aa1.56□□□□□ -2.16
YML040WYML040W PAU16P35994 123 aa1.55□□□□□ -2.16
YML040WYML040W PAU15P40585 124 aa1.55□□□□□ -2.16
YML040WYML040W HUR1P45820 110 aa1.55□□□□□ -2.16
YML040WYML040W TY1B-HO13535 1793 aa1.54□□□□□ -2.16
YML040WYML040W GNA1P43577 159 aaPredicted RBP1.54□□□□□ -2.16
YML040WYML040W RPS12P48589 143 aaKnown RBP1.54□□□□□ -2.16
YML040WYML040W YLR307C-AQ3E825 87 aa1.54□□□□□ -2.16
YML040WYML040W YGR164WP53291 111 aa1.53□□□□□ -2.16
YML040WYML040W YMR103CQ04436 120 aa1.53□□□□□ -2.16
YML040WYML040W MIC10Q96VH5 97 aa1.53□□□□□ -2.16
YML040WYML040W YLR157W-EP0CF00 54 aa1.52□□□□□ -2.17
YML040WYML040W LSM6Q06406 86 aaKnown RBP1.52□□□□□ -2.17
YML040WYML040W VMA21P41806 77 aa1.51□□□□□ -2.17
YML040WYML040W RGI1P40043 161 aaPredicted RBP1.49□□□□□ -2.17
YML040WYML040W LYS2P07702 1392 aa1.49□□□□□ -2.17
YML040WYML040W SWC7Q06707 132 aa1.47□□□□□ -2.17
YML040WYML040W URA2P07259 2214 aaKnown RBP1.46□□□□□ -2.18
YML040WYML040W YPK9Q12697 1472 aa1.46□□□□□ -2.18
YML040WYML040W TSC11P40061 1430 aa1.46□□□□□ -2.18
YML040WYML040W YHR138CP38841 114 aaPredicted RBP1.45□□□□□ -2.18
YML040WYML040W YOS1Q3E834 85 aa1.45□□□□□ -2.18
YML040WYML040W YCR101CP25607 182 aa1.44□□□□□ -2.18
YML040WYML040W YOL118CQ08259 102 aa1.44□□□□□ -2.18
YML040WYML040W YLR255CO13574 117 aa1.43□□□□□ -2.18
YML040WYML040W UBC4P15731 148 aa1.43□□□□□ -2.18
YML040WYML040W AUA1P32450 94 aa1.43□□□□□ -2.18
YML040WYML040W SRB6P32570 121 aa1.43□□□□□ -2.18
YML040WYML040W YMR090WQ04304 227 aaKnown RBP1.43□□□□□ -2.18
YML040WYML040W YCL048W-AQ2V2Q2 79 aa1.43□□□□□ -2.18
YML040WYML040W SEC16P48415 2195 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms