RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YOR376W-AQ3E805 51 aa7.36□□□□□ -1.23
SFP1YLR403W CDC39P25655 2108 aaKnown RBP7.36□□□□□ -1.23
SFP1YLR403W RFA2P26754 273 aaKnown RBP7.36□□□□□ -1.23
SFP1YLR403W FPR2P32472 135 aa7.36□□□□□ -1.23
SFP1YLR403W PIR5P46999 287 aa7.36□□□□□ -1.23
SFP1YLR403W YNL234WP53857 426 aa7.36□□□□□ -1.23
SFP1YLR403W YMR007WQ03675 126 aa7.36□□□□□ -1.23
SFP1YLR403W RPL23AP0CX41 137 aaKnown RBP7.35□□□□□ -1.23
SFP1YLR403W RPL23BP0CX42 137 aaKnown RBP7.35□□□□□ -1.23
SFP1YLR403W RTG1P32607 177 aa7.35□□□□□ -1.23
SFP1YLR403W SWD3P38123 315 aa7.35□□□□□ -1.23
SFP1YLR403W QCR9P22289 66 aa7.34□□□□□ -1.23
SFP1YLR403W MED6P38782 295 aa7.34□□□□□ -1.23
SFP1YLR403W RPB10P22139 70 aa7.34□□□□□ -1.23
SFP1YLR403W ERG2P32352 222 aa7.34□□□□□ -1.23
SFP1YLR403W CDC1P40986 491 aa7.34□□□□□ -1.23
SFP1YLR403W YGL034CP53186 121 aa7.34□□□□□ -1.23
SFP1YLR403W CUZ1P53899 274 aa7.34□□□□□ -1.23
SFP1YLR403W MXR2P25566 168 aa7.33□□□□□ -1.24
SFP1YLR403W SPT4P32914 102 aaPredicted RBP7.33□□□□□ -1.24
SFP1YLR403W APS1P35181 156 aa7.33□□□□□ -1.24
SFP1YLR403W YGR269WP40326 108 aa7.33□□□□□ -1.24
SFP1YLR403W YIL029CP40538 142 aa7.33□□□□□ -1.24
SFP1YLR403W PET191Q02772 108 aa7.33□□□□□ -1.24
SFP1YLR403W MZM1Q03429 123 aaPredicted RBP7.33□□□□□ -1.24
SFP1YLR403W RLM1Q12224 676 aa7.33□□□□□ -1.24
SFP1YLR403W RPL42AP0CX27 106 aaKnown RBP7.32□□□□□ -1.24
SFP1YLR403W RPL42BP0CX28 106 aaKnown RBP7.32□□□□□ -1.24
SFP1YLR403W CSE2P33308 149 aa7.32□□□□□ -1.24
SFP1YLR403W YER187WP40102 141 aa7.32□□□□□ -1.24
SFP1YLR403W USV1Q12132 391 aa7.32□□□□□ -1.24
SFP1YLR403W RPL16AP26784 199 aaKnown RBP7.32□□□□□ -1.24
SFP1YLR403W TIM12P32830 109 aa7.32□□□□□ -1.24
SFP1YLR403W IST3P40565 148 aaPredicted RBP7.32□□□□□ -1.24
SFP1YLR403W LST8P41318 303 aa7.32□□□□□ -1.24
SFP1YLR403W RSM19P53733 91 aaPredicted RBP7.32□□□□□ -1.24
SFP1YLR403W YPL261CQ08976 102 aa7.32□□□□□ -1.24
SFP1YLR403W YDL211CQ12121 372 aa7.31□□□□□ -1.24
SFP1YLR403W TDA8Q6B2U8 126 aa7.31□□□□□ -1.24
SFP1YLR403W NAG1Q8TGN9 163 aa7.31□□□□□ -1.24
SFP1YLR403W JJJ3P47138 172 aa7.31□□□□□ -1.24
SFP1YLR403W TOS8P53147 276 aa7.31□□□□□ -1.24
SFP1YLR403W RPL16BP26785 198 aaKnown RBP7.3□□□□□ -1.24
SFP1YLR403W YEL073CP39974 107 aa7.3□□□□□ -1.24
SFP1YLR403W YEL067CP39978 195 aa7.3□□□□□ -1.24
SFP1YLR403W NRM1P53718 249 aa7.3□□□□□ -1.24
SFP1YLR403W YDR102CQ03864 110 aa7.3□□□□□ -1.24
SFP1YLR403W YOR268CQ08734 132 aa7.3□□□□□ -1.24
SFP1YLR403W SRX1P36077 127 aa7.29□□□□□ -1.24
SFP1YLR403W PEX17P40155 199 aa7.29□□□□□ -1.24
SFP1YLR403W YPI1P43587 155 aa7.29□□□□□ -1.24
SFP1YLR403W SWS2P53937 143 aa7.29□□□□□ -1.24
SFP1YLR403W SPG3Q04398 127 aaPredicted RBP7.29□□□□□ -1.24
SFP1YLR403W YHR213WP0CI67 198 aa7.29□□□□□ -1.24
SFP1YLR403W PIR1Q03178 341 aa7.29□□□□□ -1.24
SFP1YLR403W PBP4Q07362 185 aaKnown RBP7.29□□□□□ -1.24
SFP1YLR403W ROX3P25046 220 aa7.28□□□□□ -1.24
SFP1YLR403W RPL11BQ3E757 174 aaPredicted RBP7.28□□□□□ -1.24
SFP1YLR403W HTL1Q9URQ5 78 aa7.28□□□□□ -1.24
SFP1YLR403W ECM15P35195 104 aa7.28□□□□□ -1.24
SFP1YLR403W YNL217WP40152 326 aa7.28□□□□□ -1.24
SFP1YLR403W SIM1P40472 476 aa7.28□□□□□ -1.24
SFP1YLR403W IRC23Q08416 157 aa7.28□□□□□ -1.24
SFP1YLR403W YBR255C-AQ3E776 120 aa7.28□□□□□ -1.24
SFP1YLR403W FLO9P39712 1322 aa7.27□□□□□ -1.25
SFP1YLR403W YNR077CP53758 84 aa7.26□□□□□ -1.25
SFP1YLR403W MIX14Q04341 121 aa7.26□□□□□ -1.25
SFP1YLR403W YFL051CP43552 160 aa7.26□□□□□ -1.25
SFP1YLR403W KEG1P43614 200 aa7.26□□□□□ -1.25
SFP1YLR403W YLR112WQ12130 139 aa7.26□□□□□ -1.25
SFP1YLR403W YPR011CQ12251 326 aa7.26□□□□□ -1.25
SFP1YLR403W ISF1P32488 338 aa7.25□□□□□ -1.25
SFP1YLR403W YSY6P38374 65 aa7.25□□□□□ -1.25
SFP1YLR403W YIA6P40556 373 aa7.24□□□□□ -1.25
SFP1YLR403W UBC9P50623 157 aaPredicted RBP7.24□□□□□ -1.25
SFP1YLR403W UBC13P52490 153 aa7.24□□□□□ -1.25
SFP1YLR403W PGU1P47180 361 aa7.24□□□□□ -1.25
SFP1YLR403W YFR035CP43608 114 aa7.23□□□□□ -1.25
SFP1YLR403W ICY1Q04329 127 aa7.23□□□□□ -1.25
SFP1YLR403W RPS8AP0CX39 200 aaKnown RBP7.22□□□□□ -1.25
SFP1YLR403W RPS8BP0CX40 200 aaKnown RBP7.22□□□□□ -1.25
SFP1YLR403W YBR209WP38311 105 aa7.21□□□□□ -1.25
SFP1YLR403W ICS3P47034 131 aa7.21□□□□□ -1.25
SFP1YLR403W YOL160WQ08321 113 aa7.21□□□□□ -1.25
SFP1YLR403W RPS14AP06367 137 aaKnown RBP7.21□□□□□ -1.26
SFP1YLR403W RPL11AP0C0W9 174 aaKnown RBP7.21□□□□□ -1.26
SFP1YLR403W SPS100P13130 326 aa7.2□□□□□ -1.26
SFP1YLR403W YDR246W-AQ3E763 66 aa7.2□□□□□ -1.26
SFP1YLR403W TSC3Q3E790 80 aa7.2□□□□□ -1.26
SFP1YLR403W PFY1P07274 126 aa7.2□□□□□ -1.26
SFP1YLR403W YKR045CP36138 183 aa7.2□□□□□ -1.26
SFP1YLR403W YPR053CQ6Q5F3 151 aa7.2□□□□□ -1.26
SFP1YLR403W YDL022C-AP0C5L6 82 aa7.19□□□□□ -1.26
SFP1YLR403W RPB9P27999 122 aa7.19□□□□□ -1.26
SFP1YLR403W PET8P38921 284 aa7.19□□□□□ -1.26
SFP1YLR403W DSS4P32601 143 aa7.18□□□□□ -1.26
SFP1YLR403W YLR365WQ7LIF2 110 aa7.18□□□□□ -1.26
SFP1YLR403W YHR173CP38864 112 aa7.18□□□□□ -1.26
SFP1YLR403W VTC1P40046 129 aaRIP-Chip data7.18□□□□□ -1.26not detected
SFP1YLR403W HUA1P40325 198 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms