RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W GAT4P40569 121 aa0.55□□□□□ -2.32
SLX4YLR135W GPI19Q04082 140 aa0.55□□□□□ -2.32
SLX4YLR135W HUG1Q6Q5K6 68 aa0.55□□□□□ -2.32
SLX4YLR135W RPB11P38902 120 aa0.54□□□□□ -2.32
SLX4YLR135W AIM11P87275 137 aa0.54□□□□□ -2.32
SLX4YLR135W YLR194CQ05777 254 aa0.54□□□□□ -2.32
SLX4YLR135W FRQ1Q06389 190 aa0.54□□□□□ -2.32
SLX4YLR135W ADK1P07170 222 aaKnown RBP0.54□□□□□ -2.32
SLX4YLR135W APS2Q00381 147 aa0.54□□□□□ -2.32
SLX4YLR135W FIT3Q08907 204 aa0.54□□□□□ -2.32
SLX4YLR135W ENV10Q99382 181 aa0.54□□□□□ -2.32
SLX4YLR135W YIL163CP40448 117 aa0.53□□□□□ -2.32
SLX4YLR135W YIL014C-AQ02598 104 aa0.53□□□□□ -2.32
SLX4YLR135W YMR321CQ04898 105 aa0.53□□□□□ -2.32
SLX4YLR135W RPL43AP0CX25 92 aaKnown RBP0.53□□□□□ -2.33
SLX4YLR135W RPL43BP0CX26 92 aa0.53□□□□□ -2.33
SLX4YLR135W SRX1P36077 127 aa0.53□□□□□ -2.33
SLX4YLR135W TY1B-HO13535 1793 aa0.53□□□□□ -2.33
SLX4YLR135W URA2P07259 2214 aaKnown RBP0.53□□□□□ -2.33
SLX4YLR135W RPL22AP05749 121 aaKnown RBP0.52□□□□□ -2.33
SLX4YLR135W MRPL31P14063 131 aaPredicted RBP0.52□□□□□ -2.33
SLX4YLR135W YHR130CP38834 111 aa0.52□□□□□ -2.33
SLX4YLR135W YAR029WP39549 74 aa0.52□□□□□ -2.33
SLX4YLR135W CYB5P40312 120 aa0.52□□□□□ -2.33
SLX4YLR135W PAU12P53343 120 aa0.52□□□□□ -2.33
SLX4YLR135W YLR042CQ07990 161 aa0.52□□□□□ -2.33
SLX4YLR135W YPL261CQ08976 102 aa0.52□□□□□ -2.33
SLX4YLR135W PCC1Q3E833 88 aa0.52□□□□□ -2.33
SLX4YLR135W RPO41P13433 1351 aaKnown RBP0.51□□□□□ -2.33
SLX4YLR135W EMP24P32803 203 aaKnown RBP0.51□□□□□ -2.33
SLX4YLR135W POR2P40478 281 aa0.51□□□□□ -2.33
SLX4YLR135W ARL3Q02804 198 aa0.51□□□□□ -2.33
SLX4YLR135W RTR2Q12378 196 aa0.51□□□□□ -2.33
SLX4YLR135W YGL041C-BQ3E750 60 aa0.51□□□□□ -2.33
SLX4YLR135W DAD1Q12248 94 aa0.5□□□□□ -2.33
SLX4YLR135W YLR285C-AQ3E771 56 aa0.5□□□□□ -2.33
SLX4YLR135W YGR240C-AQ3E786 66 aa0.5□□□□□ -2.33
SLX4YLR135W OST5Q92316 86 aa0.5□□□□□ -2.33
SLX4YLR135W DNA2P38859 1522 aa0.5□□□□□ -2.33
SLX4YLR135W YJL197C-AP0C5P0 93 aa0.5□□□□□ -2.33
SLX4YLR135W YCR099CP25657 155 aa0.5□□□□□ -2.33
SLX4YLR135W PAM16P42949 149 aa0.5□□□□□ -2.33
SLX4YLR135W YFR035CP43608 114 aa0.5□□□□□ -2.33
SLX4YLR135W SNN1P48232 102 aa0.5□□□□□ -2.33
SLX4YLR135W YOR097CQ12274 175 aaPredicted RBP0.5□□□□□ -2.33
SLX4YLR135W YOR034C-AQ3E735 80 aa0.5□□□□□ -2.33
SLX4YLR135W URB1P34241 1764 aaKnown RBP0.49□□□□□ -2.33
SLX4YLR135W YOR304C-AO14468 76 aa0.49□□□□□ -2.33
SLX4YLR135W COX23P38824 151 aa0.49□□□□□ -2.33
SLX4YLR135W YER187WP40102 141 aa0.49□□□□□ -2.33
SLX4YLR135W HMRA2P0CY13 119 aa0.49□□□□□ -2.33
SLX4YLR135W SEC7P11075 2009 aaKnown RBP0.49□□□□□ -2.33
SLX4YLR135W ICS3P47034 131 aa0.49□□□□□ -2.33
SLX4YLR135W SEC16P48415 2195 aaKnown RBP0.49□□□□□ -2.33
SLX4YLR135W RPL22BP56628 122 aaKnown RBP0.49□□□□□ -2.33
SLX4YLR135W ECM5Q03214 1411 aa0.49□□□□□ -2.33
SLX4YLR135W YIR021W-AQ3E739 70 aa0.49□□□□□ -2.33
SLX4YLR135W YLR363W-AQ3E747 85 aa0.49□□□□□ -2.33
SLX4YLR135W YLR307C-AQ3E825 87 aa0.49□□□□□ -2.33
SLX4YLR135W BLM10P43583 2143 aa0.48□□□□□ -2.33
SLX4YLR135W PAU24P38155 120 aa0.48□□□□□ -2.33
SLX4YLR135W VPS55P47111 140 aa0.48□□□□□ -2.33
SLX4YLR135W YJR128WP47162 119 aa0.48□□□□□ -2.33
SLX4YLR135W RUB1Q03919 77 aa0.48□□□□□ -2.33
SLX4YLR135W OCA6Q12454 224 aa0.48□□□□□ -2.33
SLX4YLR135W YLR365WQ7LIF2 110 aa0.48□□□□□ -2.33
SLX4YLR135W SPP41P38904 1435 aa0.48□□□□□ -2.33
SLX4YLR135W YLR157W-EP0CF00 54 aa0.48□□□□□ -2.33
SLX4YLR135W PAU2P32612 120 aa0.48□□□□□ -2.33
SLX4YLR135W GTT1P40582 234 aa0.48□□□□□ -2.33
SLX4YLR135W YRF1-6P53819 1859 aa0.48□□□□□ -2.33
SLX4YLR135W BRR2P32639 2163 aaKnown RBP0.47□□□□□ -2.33
SLX4YLR135W PAU19P0CE85 124 aa0.47□□□□□ -2.33
SLX4YLR135W PAU3P25610 124 aa0.47□□□□□ -2.33
SLX4YLR135W LHP1P33399 275 aaKnown RBP0.47□□□□□ -2.33
SLX4YLR135W LCL1Q02786 101 aa0.47□□□□□ -2.33
SLX4YLR135W YPK9Q12697 1472 aa0.47□□□□□ -2.33
SLX4YLR135W YEA6P39953 335 aa0.46□□□□□ -2.34
SLX4YLR135W YIR020CP40575 100 aa0.45□□□□□ -2.34
SLX4YLR135W VMA21P41806 77 aa0.45□□□□□ -2.34
SLX4YLR135W LSM6Q06406 86 aaKnown RBP0.45□□□□□ -2.34
SLX4YLR135W BNI1P41832 1953 aa0.45□□□□□ -2.34
SLX4YLR135W YER039C-AP0CD97 72 aa0.45□□□□□ -2.34
SLX4YLR135W MRPS12P53732 153 aa0.45□□□□□ -2.34
SLX4YLR135W BUD23P25627 275 aaPredicted RBP0.44□□□□□ -2.34
SLX4YLR135W SRB6P32570 121 aa0.44□□□□□ -2.34
SLX4YLR135W YER137CP40083 148 aaKnown RBP0.44□□□□□ -2.34
SLX4YLR135W PAU15P40585 124 aa0.44□□□□□ -2.34
SLX4YLR135W HUR1P45820 110 aa0.44□□□□□ -2.34
SLX4YLR135W TY4B-HP0C2J7 1802 aa0.44□□□□□ -2.34
SLX4YLR135W YHR138CP38841 114 aaPredicted RBP0.44□□□□□ -2.34
SLX4YLR135W YGR164WP53291 111 aa0.44□□□□□ -2.34
SLX4YLR135W POL2P21951 2222 aaKnown RBP0.43□□□□□ -2.34
SLX4YLR135W PAU16P35994 123 aa0.43□□□□□ -2.34
SLX4YLR135W GNA1P43577 159 aaPredicted RBP0.43□□□□□ -2.34
SLX4YLR135W SWC7Q06707 132 aa0.43□□□□□ -2.34
SLX4YLR135W YOL118CQ08259 102 aa0.43□□□□□ -2.34
SLX4YLR135W YCL048W-AQ2V2Q2 79 aa0.43□□□□□ -2.34
SLX4YLR135W AUA1P32450 94 aa0.42□□□□□ -2.34
SLX4YLR135W YHR173CP38864 112 aa0.42□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms