RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YDR034C-AP0C289 58 aa1.81□□□□□ -2.12
SED5YLR026C URA5P13298 226 aaKnown RBP1.81□□□□□ -2.12
SED5YLR026C RPB3P16370 318 aaKnown RBP1.81□□□□□ -2.12
SED5YLR026C FZF1P32805 299 aa1.81□□□□□ -2.12
SED5YLR026C MRPL28P36527 147 aa1.81□□□□□ -2.12
SED5YLR026C EGD2P38879 174 aaKnown RBP1.81□□□□□ -2.12
SED5YLR026C NSA2P40078 261 aaKnown RBP1.81□□□□□ -2.12
SED5YLR026C ARP3P47117 449 aaKnown RBP1.81□□□□□ -2.12
SED5YLR026C YGR025WP53216 100 aa1.81□□□□□ -2.12
SED5YLR026C THI74Q04083 370 aa1.81□□□□□ -2.12
SED5YLR026C SDH7Q04401 133 aa1.81□□□□□ -2.12
SED5YLR026C YLR031WQ07978 186 aa1.81□□□□□ -2.12
SED5YLR026C MAG1P22134 296 aaKnown RBP1.8□□□□□ -2.12
SED5YLR026C MAK3Q03503 176 aa1.8□□□□□ -2.12
SED5YLR026C GVP36P40531 326 aaKnown RBP1.79□□□□□ -2.12
SED5YLR026C YAE1P47118 141 aaPredicted RBP1.79□□□□□ -2.12
SED5YLR026C VMA10P48836 114 aaKnown RBP1.79□□□□□ -2.12
SED5YLR026C MMS2P53152 137 aa1.79□□□□□ -2.12
SED5YLR026C MPC3P53311 146 aa1.79□□□□□ -2.12
SED5YLR026C EST3Q03096 181 aa1.79□□□□□ -2.12
SED5YLR026C YOL160WQ08321 113 aa1.79□□□□□ -2.12
SED5YLR026C SCP1Q08873 200 aa1.79□□□□□ -2.12
SED5YLR026C PET20Q99373 253 aa1.79□□□□□ -2.12
SED5YLR026C RTC6O14464 93 aa1.78□□□□□ -2.12
SED5YLR026C YHR213WP0CI67 198 aa1.78□□□□□ -2.12
SED5YLR026C CNB1P25296 175 aa1.78□□□□□ -2.12
SED5YLR026C YNL217WP40152 326 aa1.78□□□□□ -2.12
SED5YLR026C POP3P53833 195 aaPredicted RBP1.78□□□□□ -2.12
SED5YLR026C SNO1Q03144 224 aa1.78□□□□□ -2.12
SED5YLR026C FRQ1Q06389 190 aa1.78□□□□□ -2.12
SED5YLR026C ATG41Q12048 136 aa1.78□□□□□ -2.12
SED5YLR026C MED11Q99278 115 aa1.78□□□□□ -2.12
SED5YLR026C RPL27AP0C2H6 136 aaKnown RBP1.77□□□□□ -2.13
SED5YLR026C MRP17P28778 131 aa1.77□□□□□ -2.13
SED5YLR026C PAN3P36102 679 aaPredicted RBP1.77□□□□□ -2.13
SED5YLR026C YBR219CP38317 127 aa1.77□□□□□ -2.13
SED5YLR026C HTD2P38790 280 aaKnown RBP1.77□□□□□ -2.13
SED5YLR026C EMC5P40540 141 aa1.77□□□□□ -2.13
SED5YLR026C IMP2P46972 177 aa1.77□□□□□ -2.13
SED5YLR026C UBC12P52491 188 aa1.77□□□□□ -2.13
SED5YLR026C LCL1Q02786 101 aa1.77□□□□□ -2.13
SED5YLR026C YGR240C-AQ3E786 66 aa1.77□□□□□ -2.13
SED5YLR026C MRS1P07266 363 aa1.76□□□□□ -2.13
SED5YLR026C BET1P22804 142 aa1.76□□□□□ -2.13
SED5YLR026C TRS20P38334 175 aa1.76□□□□□ -2.13
SED5YLR026C POC4Q12245 148 aaPredicted RBP1.76□□□□□ -2.13
SED5YLR026C YDR010CQ12426 110 aa1.76□□□□□ -2.13
SED5YLR026C YPR145C-AQ2V2P0 78 aa1.76□□□□□ -2.13
SED5YLR026C YAR023CD6VPM8 179 aa1.75□□□□□ -2.13
SED5YLR026C DDR48P18899 430 aaKnown RBP1.75□□□□□ -2.13
SED5YLR026C YGL010WP25338 174 aa1.75□□□□□ -2.13
SED5YLR026C EMP24P32803 203 aaKnown RBP1.75□□□□□ -2.13
SED5YLR026C SFT2P38166 215 aa1.75□□□□□ -2.13
SED5YLR026C CSH1P38287 376 aa1.75□□□□□ -2.13
SED5YLR026C SKI6P46948 246 aaPredicted RBP1.75□□□□□ -2.13
SED5YLR026C AIM25P47140 327 aa1.75□□□□□ -2.13
SED5YLR026C RBL2P48606 106 aaKnown RBP1.75□□□□□ -2.13
SED5YLR026C ORM1P53224 222 aa1.75□□□□□ -2.13
SED5YLR026C KEI1Q06346 221 aa1.75□□□□□ -2.13
SED5YLR026C SYM1Q06563 197 aa1.75□□□□□ -2.13
SED5YLR026C CCW12Q12127 133 aa1.75□□□□□ -2.13
SED5YLR026C RRT15Q3E811 62 aa1.75□□□□□ -2.13
SED5YLR026C YLR307C-AQ3E825 87 aa1.75□□□□□ -2.13
SED5YLR026C SUS1Q6WNK7 96 aa1.75□□□□□ -2.13
SED5YLR026C RPS25BP0C0T4 108 aaKnown RBP1.74□□□□□ -2.13
SED5YLR026C FPR2P32472 135 aa1.74□□□□□ -2.13
SED5YLR026C LSM1P47017 172 aaKnown RBP1.74□□□□□ -2.13
SED5YLR026C VPS28Q02767 242 aa1.74□□□□□ -2.13
SED5YLR026C ANT1Q06497 328 aa1.74□□□□□ -2.13
SED5YLR026C RPS25AQ3E792 108 aaPredicted RBP1.74□□□□□ -2.13
SED5YLR026C YLL066W-BQ8TGJ7 56 aa1.74□□□□□ -2.13
SED5YLR026C QCR2P07257 368 aa1.73□□□□□ -2.13
SED5YLR026C HYP2P23301 157 aaKnown RBP1.73□□□□□ -2.13
SED5YLR026C SHB17P36136 271 aaKnown RBP1.73□□□□□ -2.13
SED5YLR026C LSM2P38203 95 aaKnown RBP1.73□□□□□ -2.13
SED5YLR026C YBR013CP38215 129 aa1.73□□□□□ -2.13
SED5YLR026C YNL184CP53876 108 aa1.73□□□□□ -2.13
SED5YLR026C TMA23Q03525 211 aa1.73□□□□□ -2.13
SED5YLR026C YMR090WQ04304 227 aaKnown RBP1.73□□□□□ -2.13
SED5YLR026C YLR236CA0A023PZG4 107 aa1.72□□□□□ -2.13
SED5YLR026C YPR010C-AA5Z2X5 72 aa1.72□□□□□ -2.13
SED5YLR026C RPL33AP05744 107 aaKnown RBP1.72□□□□□ -2.13
SED5YLR026C SPO13P23624 291 aa1.72□□□□□ -2.13
SED5YLR026C KNH1P50112 268 aa1.72□□□□□ -2.13
SED5YLR026C MIC27P50945 234 aa1.72□□□□□ -2.13
SED5YLR026C NAT3Q06504 195 aa1.72□□□□□ -2.13
SED5YLR026C YDR029WQ12111 104 aa1.72□□□□□ -2.13
SED5YLR026C HPA3P39979 161 aa1.71□□□□□ -2.14
SED5YLR026C VTC1P40046 129 aaRIP-Chip data1.71□□□□□ -2.14not detected
SED5YLR026C RPL13BP40212 199 aaKnown RBP1.71□□□□□ -2.14
SED5YLR026C ERI1P62651 68 aaKnown RBP1.71□□□□□ -2.14
SED5YLR026C YDR366CP87287 132 aa1.71□□□□□ -2.14
SED5YLR026C SHH3Q04487 196 aa1.71□□□□□ -2.14
SED5YLR026C YMR253CQ04835 414 aa1.71□□□□□ -2.14
SED5YLR026C YOR385WQ08909 290 aa1.71□□□□□ -2.14
SED5YLR026C YPL225WQ08971 146 aaKnown RBP1.71□□□□□ -2.14
SED5YLR026C RPL13AQ12690 199 aaPredicted RBP1.71□□□□□ -2.14
SED5YLR026C MBF1O14467 151 aaKnown RBP1.7□□□□□ -2.14
SED5YLR026C VAR1P02381 398 aa1.7□□□□□ -2.14
SED5YLR026C TIR1P10863 254 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms