RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	HYR1	P40581	163 aa	Known RBP	2.28	□□□□□ -2.04
CCM1	YGR150C	OST5	Q92316	86 aa		2.28	□□□□□ -2.04
CCM1	YGR150C	PAU24	P38155	120 aa		2.27	□□□□□ -2.05
CCM1	YGR150C	RTC6	O14464	93 aa		2.27	□□□□□ -2.05
CCM1	YGR150C	YKR045C	P36138	183 aa		2.27	□□□□□ -2.05
CCM1	YGR150C	YEL014C	P39999	101 aa		2.27	□□□□□ -2.05
CCM1	YGR150C	HSP150	P32478	413 aa		2.26	□□□□□ -2.05
CCM1	YGR150C	CYB5	P40312	120 aa		2.26	□□□□□ -2.05
CCM1	YGR150C	YIL014C-A	Q02598	104 aa		2.26	□□□□□ -2.05
CCM1	YGR150C	RDS3	Q06835	107 aa	Predicted RBP	2.26	□□□□□ -2.05
CCM1	YGR150C	PCC1	Q3E833	88 aa		2.26	□□□□□ -2.05
CCM1	YGR150C	SNN1	P48232	102 aa		2.26	□□□□□ -2.05
CCM1	YGR150C	PAU19	P0CE85	124 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	PAU3	P25610	124 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	ATG8	P38182	117 aa	RIP-Chip data	2.25	□□□□□ -2.05	not detected
CCM1	YGR150C	YJL144W	P47009	104 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	RPL22B	P56628	122 aa	Known RBP	2.25	□□□□□ -2.05
CCM1	YGR150C	YHR022C	P38763	256 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	YHR138C	P38841	114 aa	Predicted RBP	2.25	□□□□□ -2.05
CCM1	YGR150C	YDR042C	Q03205	200 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	AVO2	Q04749	426 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	SUS1	Q6WNK7	96 aa		2.25	□□□□□ -2.05
CCM1	YGR150C	TY1B-BR	Q12193	1756 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	SOD1	P00445	154 aa	Known RBP	2.24	□□□□□ -2.05
CCM1	YGR150C	AGA2	P32781	87 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	YIR020C	P40575	100 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	CWP2	P43497	92 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	MET31	Q03081	177 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	ROM2	P51862	1356 aa	Known RBP	2.24	□□□□□ -2.05
CCM1	YGR150C	RPL36B	O14455	100 aa	Known RBP	2.24	□□□□□ -2.05
CCM1	YGR150C	RPL36A	P05745	100 aa	Predicted RBP	2.24	□□□□□ -2.05
CCM1	YGR150C	FPR1	P20081	114 aa	Known RBP	2.24	□□□□□ -2.05
CCM1	YGR150C	NRG2	P38082	220 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	YLR194C	Q05777	254 aa		2.24	□□□□□ -2.05
CCM1	YGR150C	YJL197C-A	P0C5P0	93 aa		2.23	□□□□□ -2.05
CCM1	YGR150C	CYT2	Q00873	224 aa		2.23	□□□□□ -2.05
CCM1	YGR150C	YLR363W-A	Q3E747	85 aa		2.23	□□□□□ -2.05
CCM1	YGR150C	LSM2	P38203	95 aa	Known RBP	2.23	□□□□□ -2.05
CCM1	YGR150C	DAN1	P47178	298 aa		2.23	□□□□□ -2.05
CCM1	YGR150C	RIF1	P29539	1916 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	YHR213W	P0CI67	198 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	PAU16	P35994	123 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	SRX1	P36077	127 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	COX23	P38824	151 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	PAU15	P40585	124 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	EMC6	Q12431	108 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	RPA190	P10964	1664 aa	Known RBP	2.22	□□□□□ -2.05
CCM1	YGR150C	SEC7	P11075	2009 aa	Known RBP	2.22	□□□□□ -2.05
CCM1	YGR150C	RPB7	P34087	171 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	RGM1	Q00453	211 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	SML1	Q04964	104 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	RPO31	P04051	1460 aa		2.22	□□□□□ -2.05
CCM1	YGR150C	QCR8	P08525	94 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	CDC39	P25655	2108 aa	Known RBP	2.21	□□□□□ -2.06
CCM1	YGR150C	YFL065C	P43539	102 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	HPA2	Q06592	156 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	YPR203W	Q08994	102 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	MHF1	Q3E835	90 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	YPK9	Q12697	1472 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	LAA1	P39526	2014 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	GCV3	P39726	170 aa	Predicted RBP	2.21	□□□□□ -2.06
CCM1	YGR150C	YHR007C-A	Q07074	71 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	YHR213W-A	Q8TGT4	77 aa		2.21	□□□□□ -2.06
CCM1	YGR150C	YCR085W	P25650	117 aa		2.2	□□□□□ -2.06
CCM1	YGR150C	SWR1	Q05471	1514 aa		2.2	□□□□□ -2.06
CCM1	YGR150C	GSC2	P40989	1895 aa		2.2	□□□□□ -2.06
CCM1	YGR150C	TY1B-NL2	Q99337	1749 aa	Known RBP	2.2	□□□□□ -2.06
CCM1	YGR150C	YRF1-2	P40105	1681 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	RSM18	P40033	138 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	YMR175W-A	Q3E766	64 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	TY1B-DR1	Q03855	1755 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	TY1B-DR3	Q99231	1755 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	MYO1	P08964	1928 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	YHL005C	P38752	130 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	PAU5	P43575	122 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	COA4	Q05809	96 aa		2.19	□□□□□ -2.06
CCM1	YGR150C	POC4	Q12245	148 aa	Predicted RBP	2.19	□□□□□ -2.06
CCM1	YGR150C	YLR419W	Q06698	1435 aa	Known RBP	2.18	□□□□□ -2.06
CCM1	YGR150C	YBR027C	P38220	110 aa		2.18	□□□□□ -2.06
CCM1	YGR150C	DSE2	P38844	325 aa		2.18	□□□□□ -2.06
CCM1	YGR150C	ICY1	Q04329	127 aa		2.18	□□□□□ -2.06
CCM1	YGR150C	ENV10	Q99382	181 aa		2.18	□□□□□ -2.06
CCM1	YGR150C	HMRA2	P0CY13	119 aa		2.17	□□□□□ -2.06
CCM1	YGR150C	RPA12	P32529	125 aa	Known RBP	2.17	□□□□□ -2.06
CCM1	YGR150C	POR2	P40478	281 aa		2.17	□□□□□ -2.06
CCM1	YGR150C	NUP159	P40477	1460 aa		2.17	□□□□□ -2.06
CCM1	YGR150C	RPS22A	P0C0W1	130 aa	Known RBP	2.16	□□□□□ -2.06
CCM1	YGR150C	YGL014C-A	P0C5N1	53 aa		2.16	□□□□□ -2.06
CCM1	YGR150C	GDB1	Q06625	1536 aa		2.16	□□□□□ -2.06
CCM1	YGR150C	ROX3	P25046	220 aa		2.16	□□□□□ -2.06
CCM1	YGR150C	IMP2	P46972	177 aa		2.15	□□□□□ -2.06
CCM1	YGR150C	ICS3	P47034	131 aa		2.15	□□□□□ -2.07
CCM1	YGR150C	TAR1	Q8TGM6	124 aa		2.15	□□□□□ -2.07
CCM1	YGR150C	YBR013C	P38215	129 aa		2.14	□□□□□ -2.07
CCM1	YGR150C	YLR285C-A	Q3E771	56 aa		2.14	□□□□□ -2.07
CCM1	YGR150C	PAI3	P01094	68 aa		2.14	□□□□□ -2.07
CCM1	YGR150C	LST8	P41318	303 aa		2.14	□□□□□ -2.07
CCM1	YGR150C	PRM3	Q08931	133 aa		2.14	□□□□□ -2.07
CCM1	YGR150C	DNA2	P38859	1522 aa		2.14	□□□□□ -2.07
CCM1	YGR150C	PFY1	P07274	126 aa		2.13	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms