RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W SGF11Q03067 99 aa3.71□□□□□ -1.82
LCP5YER127W FRQ1Q06389 190 aa3.71□□□□□ -1.82
LCP5YER127W YNL146C-AQ3E7Z1 64 aa3.71□□□□□ -1.82
LCP5YER127W SPS2P08459 502 aa3.7□□□□□ -1.82
LCP5YER127W VAM10Q08474 114 aa3.7□□□□□ -1.82
LCP5YER127W YPR013CQ12145 317 aa3.7□□□□□ -1.82
LCP5YER127W YOR011W-AQ3E807 68 aa3.7□□□□□ -1.82
LCP5YER127W YCR075W-AQ3E830 75 aa3.7□□□□□ -1.82
LCP5YER127W HTB2P02294 131 aa3.69□□□□□ -1.82
LCP5YER127W RPS25BP0C0T4 108 aaKnown RBP3.69□□□□□ -1.82
LCP5YER127W MRPL28P36527 147 aa3.69□□□□□ -1.82
LCP5YER127W SLM6P38343 150 aa3.69□□□□□ -1.82
LCP5YER127W SNU13P39990 126 aaKnown RBP3.69□□□□□ -1.82
LCP5YER127W RPS25AQ3E792 108 aaPredicted RBP3.69□□□□□ -1.82
LCP5YER127W YHR213W-AQ8TGT4 77 aa3.69□□□□□ -1.82
LCP5YER127W CDC7P06243 507 aa3.68□□□□□ -1.82
LCP5YER127W YBR242WP38331 238 aa3.68□□□□□ -1.82
LCP5YER127W YKE4P40544 346 aa3.68□□□□□ -1.82
LCP5YER127W MIC27P50945 234 aa3.68□□□□□ -1.82
LCP5YER127W YPR145C-AQ2V2P0 78 aa3.68□□□□□ -1.82
LCP5YER127W RPL2AP0CX45 254 aaKnown RBP3.67□□□□□ -1.82
LCP5YER127W RPL2BP0CX46 254 aaKnown RBP3.67□□□□□ -1.82
LCP5YER127W YJR015WP47090 510 aa3.67□□□□□ -1.82
LCP5YER127W CYT2Q00873 224 aa3.67□□□□□ -1.82
LCP5YER127W YLR146W-AQ2V2P1 62 aa3.67□□□□□ -1.82
LCP5YER127W YHR213WP0CI67 198 aa3.66□□□□□ -1.82
LCP5YER127W RPS11AP0CX47 156 aaKnown RBP3.66□□□□□ -1.82
LCP5YER127W RPS11BP0CX48 156 aaKnown RBP3.66□□□□□ -1.82
LCP5YER127W SFT2P38166 215 aa3.66□□□□□ -1.82
LCP5YER127W YHR022CP38763 256 aa3.66□□□□□ -1.82
LCP5YER127W YER135CP40082 130 aa3.66□□□□□ -1.82
LCP5YER127W SWM2P40342 146 aa3.66□□□□□ -1.82
LCP5YER127W POC4Q12245 148 aaPredicted RBP3.66□□□□□ -1.82
LCP5YER127W DDI2P0CH63 225 aa3.65□□□□□ -1.83
LCP5YER127W DDI3P0CH64 225 aa3.65□□□□□ -1.83
LCP5YER127W EMP24P32803 203 aaKnown RBP3.65□□□□□ -1.83
LCP5YER127W PGD1P40356 397 aa3.65□□□□□ -1.83
LCP5YER127W RPL33BP41056 107 aaKnown RBP3.65□□□□□ -1.83
LCP5YER127W SHH3Q04487 196 aa3.65□□□□□ -1.83
LCP5YER127W YEA6P39953 335 aa3.64□□□□□ -1.83
LCP5YER127W IMP2P46972 177 aa3.64□□□□□ -1.83
LCP5YER127W YOL160WQ08321 113 aa3.63□□□□□ -1.83
LCP5YER127W FCF2Q12035 217 aaPredicted RBP3.63□□□□□ -1.83
LCP5YER127W CCW12Q12127 133 aa3.63□□□□□ -1.83
LCP5YER127W COA2Q3E823 68 aa3.63□□□□□ -1.83
LCP5YER127W SEC4P07560 215 aaKnown RBP3.62□□□□□ -1.83
LCP5YER127W QCR9P22289 66 aa3.62□□□□□ -1.83
LCP5YER127W HSP12P22943 109 aaKnown RBP3.62□□□□□ -1.83
LCP5YER127W YCR001WP25347 104 aa3.62□□□□□ -1.83
LCP5YER127W GAT4P40569 121 aa3.62□□□□□ -1.83
LCP5YER127W SNO1Q03144 224 aa3.62□□□□□ -1.83
LCP5YER127W YMR082CQ04276 118 aa3.62□□□□□ -1.83
LCP5YER127W RRT7Q07829 113 aa3.62□□□□□ -1.83
LCP5YER127W SHB17P36136 271 aaKnown RBP3.61□□□□□ -1.83
LCP5YER127W YEA4P40004 342 aa3.61□□□□□ -1.83
LCP5YER127W SPC1P46965 94 aa3.61□□□□□ -1.83
LCP5YER127W MRPS17Q03246 237 aaPredicted RBP3.61□□□□□ -1.83
LCP5YER127W RPB3P16370 318 aaKnown RBP3.6□□□□□ -1.83
LCP5YER127W DER1P38307 211 aa3.6□□□□□ -1.83
LCP5YER127W GLE2P40066 365 aa3.6□□□□□ -1.83
LCP5YER127W YGR269WP40326 108 aa3.6□□□□□ -1.83
LCP5YER127W YGR240C-AQ3E786 66 aa3.6□□□□□ -1.83
LCP5YER127W TSC3Q3E790 80 aa3.6□□□□□ -1.83
LCP5YER127W YNL200CP40165 246 aaKnown RBP3.59□□□□□ -1.83
LCP5YER127W TMA23Q03525 211 aa3.59□□□□□ -1.83
LCP5YER127W YFR032C-BQ8TGU2 87 aa3.59□□□□□ -1.83
LCP5YER127W LSM2P38203 95 aaKnown RBP3.58□□□□□ -1.84
LCP5YER127W YBR292CP38357 123 aa3.58□□□□□ -1.84
LCP5YER127W VTC1P40046 129 aaRIP-Chip data3.58□□□□□ -1.84not detected
LCP5YER127W MRS1P07266 363 aa3.57□□□□□ -1.84
LCP5YER127W MAG1P22134 296 aaKnown RBP3.57□□□□□ -1.84
LCP5YER127W DSE2P38844 325 aa3.57□□□□□ -1.84
LCP5YER127W YDR366CP87287 132 aa3.57□□□□□ -1.84
LCP5YER127W COA4Q05809 96 aa3.57□□□□□ -1.84
LCP5YER127W YGR025WP53216 100 aa3.56□□□□□ -1.84
LCP5YER127W VAR1P02381 398 aa3.55□□□□□ -1.84
LCP5YER127W RPL27AP0C2H6 136 aaKnown RBP3.55□□□□□ -1.84
LCP5YER127W RPL27BP0C2H7 136 aaKnown RBP3.55□□□□□ -1.84
LCP5YER127W ANB1P19211 157 aa3.55□□□□□ -1.84
LCP5YER127W BET1P22804 142 aa3.55□□□□□ -1.84
LCP5YER127W SPO13P23624 291 aa3.55□□□□□ -1.84
LCP5YER127W YCL001W-AP87012 153 aa3.55□□□□□ -1.84
LCP5YER127W YMR007WQ03675 126 aa3.55□□□□□ -1.84
LCP5YER127W YMR253CQ04835 414 aa3.55□□□□□ -1.84
LCP5YER127W AME1P38313 324 aa3.54□□□□□ -1.84
LCP5YER127W YHR173CP38864 112 aa3.54□□□□□ -1.84
LCP5YER127W SVP26P38869 228 aa3.54□□□□□ -1.84
LCP5YER127W AVO2Q04749 426 aa3.54□□□□□ -1.84
LCP5YER127W FIT2Q08906 153 aa3.54□□□□□ -1.84
LCP5YER127W AHT1P29589 182 aa3.53□□□□□ -1.84
LCP5YER127W SHG1P38337 142 aa3.53□□□□□ -1.84
LCP5YER127W YNL217WP40152 326 aa3.53□□□□□ -1.84
LCP5YER127W YJR111CP47148 283 aaKnown RBP3.53□□□□□ -1.84
LCP5YER127W ANT1Q06497 328 aa3.53□□□□□ -1.84
LCP5YER127W DAD1Q12248 94 aa3.53□□□□□ -1.84
LCP5YER127W RTC6O14464 93 aa3.52□□□□□ -1.85
LCP5YER127W UBI4P0CG63 381 aaKnown RBP3.52□□□□□ -1.85
LCP5YER127W CKS1P20486 150 aaKnown RBP3.52□□□□□ -1.85
LCP5YER127W MMS2P53152 137 aa3.52□□□□□ -1.85
LCP5YER127W TOM7P53507 60 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms