RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C HAL1Q01766 294 aa3.63□□□□□ -1.83
PRP28YDR243C YLR302CO13544 120 aa3.63□□□□□ -1.83
PRP28YDR243C CSE2P33308 149 aa3.63□□□□□ -1.83
PRP28YDR243C YRA2P36036 203 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
PRP28YDR243C SFT2P38166 215 aa3.63□□□□□ -1.83
PRP28YDR243C SGN1P40561 250 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
PRP28YDR243C RSM19P53733 91 aaPredicted RBP3.63□□□□□ -1.83
PRP28YDR243C YNL046WP53956 172 aa3.63□□□□□ -1.83
PRP28YDR243C SPG3Q04398 127 aaPredicted RBP3.63□□□□□ -1.83
PRP28YDR243C YOR186WQ08560 144 aa3.63□□□□□ -1.83
PRP28YDR243C TIM18Q08749 192 aa3.63□□□□□ -1.83
PRP28YDR243C EMC6Q12431 108 aa3.63□□□□□ -1.83
PRP28YDR243C YDR381C-AQ3E6R5 114 aa3.63□□□□□ -1.83
PRP28YDR243C RPL20AP0CX23 172 aaKnown RBP3.62□□□□□ -1.83
PRP28YDR243C RPL20BP0CX24 172 aaPredicted RBP3.62□□□□□ -1.83
PRP28YDR243C CSH1P38287 376 aa3.62□□□□□ -1.83
PRP28YDR243C YEL073CP39974 107 aa3.62□□□□□ -1.83
PRP28YDR243C IST3P40565 148 aaPredicted RBP3.62□□□□□ -1.83
PRP28YDR243C LST8P41318 303 aa3.62□□□□□ -1.83
PRP28YDR243C YMR007WQ03675 126 aa3.62□□□□□ -1.83
PRP28YDR243C NIP7Q08962 181 aaKnown RBP3.62□□□□□ -1.83
PRP28YDR243C RPL42AP0CX27 106 aaKnown RBP3.61□□□□□ -1.83
PRP28YDR243C RPL42BP0CX28 106 aaKnown RBP3.61□□□□□ -1.83
PRP28YDR243C FPR2P32472 135 aa3.61□□□□□ -1.83
PRP28YDR243C YBL081WP38180 368 aaKnown RBP3.61□□□□□ -1.83
PRP28YDR243C MED6P38782 295 aa3.61□□□□□ -1.83
PRP28YDR243C RPP1P38786 293 aa3.61□□□□□ -1.83
PRP28YDR243C RLM1Q12224 676 aa3.61□□□□□ -1.83
PRP28YDR243C YPR011CQ12251 326 aa3.61□□□□□ -1.83
PRP28YDR243C YPR064WQ12492 139 aa3.61□□□□□ -1.83
PRP28YDR243C DSE2P38844 325 aa3.61□□□□□ -1.83
PRP28YDR243C YER187WP40102 141 aa3.61□□□□□ -1.83
PRP28YDR243C CDC1P40986 491 aa3.61□□□□□ -1.83
PRP28YDR243C YPI1P43587 155 aa3.61□□□□□ -1.83
PRP28YDR243C YDR102CQ03864 110 aa3.61□□□□□ -1.83
PRP28YDR243C RRS1Q08746 203 aaKnown RBP3.61□□□□□ -1.83
PRP28YDR243C COX17Q12287 69 aa3.61□□□□□ -1.83
PRP28YDR243C YBR255C-AQ3E776 120 aa3.61□□□□□ -1.83
PRP28YDR243C RRT15Q3E811 62 aa3.61□□□□□ -1.83
PRP28YDR243C MIC10Q96VH5 97 aa3.61□□□□□ -1.83
PRP28YDR243C SPT4P32914 102 aaPredicted RBP3.6□□□□□ -1.83
PRP28YDR243C SWD3P38123 315 aa3.6□□□□□ -1.83
PRP28YDR243C VHS2P40463 436 aa3.6□□□□□ -1.83
PRP28YDR243C PIR5P46999 287 aa3.6□□□□□ -1.83
PRP28YDR243C UBC9P50623 157 aaPredicted RBP3.6□□□□□ -1.83
PRP28YDR243C ATP23P53722 227 aa3.6□□□□□ -1.83
PRP28YDR243C SMD1Q02260 146 aaPredicted RBP3.6□□□□□ -1.83
PRP28YDR243C YDL211CQ12121 372 aa3.6□□□□□ -1.83
PRP28YDR243C USV1Q12132 391 aa3.6□□□□□ -1.83
PRP28YDR243C ROX3P25046 220 aa3.59□□□□□ -1.83
PRP28YDR243C RPL16BP26785 198 aaKnown RBP3.59□□□□□ -1.83
PRP28YDR243C PEX17P40155 199 aa3.59□□□□□ -1.83
PRP28YDR243C SIM1P40472 476 aa3.59□□□□□ -1.83
PRP28YDR243C URM1P40554 99 aaPredicted RBP3.59□□□□□ -1.83
PRP28YDR243C YNL234WP53857 426 aa3.59□□□□□ -1.83
PRP28YDR243C ATP19P81451 68 aa3.59□□□□□ -1.83
PRP28YDR243C YPL261CQ08976 102 aa3.59□□□□□ -1.83
PRP28YDR243C DIF1O13577 133 aa3.58□□□□□ -1.84
PRP28YDR243C RPL16AP26784 199 aaKnown RBP3.58□□□□□ -1.84
PRP28YDR243C YEL067CP39978 195 aa3.58□□□□□ -1.84
PRP28YDR243C YFL019CP43576 117 aa3.58□□□□□ -1.84
PRP28YDR243C EAF6P47128 113 aa3.58□□□□□ -1.84
PRP28YDR243C PIR1Q03178 341 aa3.58□□□□□ -1.84
PRP28YDR243C MIX14Q04341 121 aa3.58□□□□□ -1.84
PRP28YDR243C IRC23Q08416 157 aa3.58□□□□□ -1.84
PRP28YDR243C YHR213WP0CI67 198 aa3.58□□□□□ -1.84
PRP28YDR243C YSY6P38374 65 aa3.58□□□□□ -1.84
PRP28YDR243C UBC13P52490 153 aa3.58□□□□□ -1.84
PRP28YDR243C YNR077CP53758 84 aa3.58□□□□□ -1.84
PRP28YDR243C TIM12P32830 109 aa3.57□□□□□ -1.84
PRP28YDR243C YNL217WP40152 326 aa3.57□□□□□ -1.84
PRP28YDR243C YIA6P40556 373 aa3.57□□□□□ -1.84
PRP28YDR243C YFL051CP43552 160 aa3.57□□□□□ -1.84
PRP28YDR243C SWS2P53937 143 aa3.57□□□□□ -1.84
PRP28YDR243C RPS21BQ3E754 87 aaKnown RBP3.57□□□□□ -1.84
PRP28YDR243C TDA8Q6B2U8 126 aa3.57□□□□□ -1.84
PRP28YDR243C CDC39P25655 2108 aaKnown RBP3.56□□□□□ -1.84
PRP28YDR243C CYR1P08678 2026 aaKnown RBP3.56□□□□□ -1.84
PRP28YDR243C PFY1P07274 126 aa3.56□□□□□ -1.84
PRP28YDR243C RPS8AP0CX39 200 aaKnown RBP3.56□□□□□ -1.84
PRP28YDR243C RPS8BP0CX40 200 aaKnown RBP3.56□□□□□ -1.84
PRP28YDR243C MXR2P25566 168 aa3.56□□□□□ -1.84
PRP28YDR243C PGU1P47180 361 aa3.56□□□□□ -1.84
PRP28YDR243C PBP4Q07362 185 aaKnown RBP3.56□□□□□ -1.84
PRP28YDR243C YLR365WQ7LIF2 110 aa3.56□□□□□ -1.84
PRP28YDR243C YOL029CQ08187 201 aa3.56□□□□□ -1.84
PRP28YDR243C HUG1Q6Q5K6 68 aa3.56□□□□□ -1.84
PRP28YDR243C PAU7P39545 55 aa3.55□□□□□ -1.84
PRP28YDR243C YIL029CP40538 142 aa3.55□□□□□ -1.84
PRP28YDR243C KEG1P43614 200 aa3.55□□□□□ -1.84
PRP28YDR243C YGR050CP53231 118 aa3.55□□□□□ -1.84
PRP28YDR243C NRM1P53718 249 aa3.55□□□□□ -1.84
PRP28YDR243C RPC11Q04307 110 aaPredicted RBP3.55□□□□□ -1.84
PRP28YDR243C ICY1Q04329 127 aa3.55□□□□□ -1.84
PRP28YDR243C YOR268CQ08734 132 aa3.55□□□□□ -1.84
PRP28YDR243C YOR376W-AQ3E805 51 aa3.55□□□□□ -1.84
PRP28YDR243C NAG1Q8TGN9 163 aa3.55□□□□□ -1.84
PRP28YDR243C YDL022C-AP0C5L6 82 aa3.54□□□□□ -1.84
PRP28YDR243C YDR246W-AQ3E763 66 aa3.54□□□□□ -1.84
PRP28YDR243C YPR108W-AQ3E7B3 70 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms