RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C VHS2P40463 436 aa5.78□□□□□ -1.48
CDC13YDL220C RPL34BP40525 121 aaKnown RBP5.78□□□□□ -1.48
CDC13YDL220C YNR077CP53758 84 aa5.78□□□□□ -1.48
CDC13YDL220C DSS4P32601 143 aa5.77□□□□□ -1.49
CDC13YDL220C YDL022C-AP0C5L6 82 aa5.77□□□□□ -1.49
CDC13YDL220C RPL42AP0CX27 106 aaKnown RBP5.77□□□□□ -1.49
CDC13YDL220C RPL42BP0CX28 106 aaKnown RBP5.77□□□□□ -1.49
CDC13YDL220C BET1P22804 142 aa5.77□□□□□ -1.49
CDC13YDL220C YGR050CP53231 118 aa5.77□□□□□ -1.49
CDC13YDL220C DAT1P13483 248 aaKnown RBP5.76□□□□□ -1.49
CDC13YDL220C RRS1Q08746 203 aaKnown RBP5.76□□□□□ -1.49
CDC13YDL220C YLR365WQ7LIF2 110 aa5.76□□□□□ -1.49
CDC13YDL220C RPB8P20436 146 aa5.76□□□□□ -1.49
CDC13YDL220C YOL118CQ08259 102 aa5.75□□□□□ -1.49
CDC13YDL220C YPR108W-AQ3E7B3 70 aa5.75□□□□□ -1.49
CDC13YDL220C AQY1P0CD91 305 aa5.75□□□□□ -1.49
CDC13YDL220C ISF1P32488 338 aa5.75□□□□□ -1.49
CDC13YDL220C YFL051CP43552 160 aa5.75□□□□□ -1.49
CDC13YDL220C TOM7P53507 60 aa5.75□□□□□ -1.49
CDC13YDL220C CUZ1P53899 274 aa5.75□□□□□ -1.49
CDC13YDL220C RLM1Q12224 676 aa5.75□□□□□ -1.49
CDC13YDL220C IGO2Q9P305 131 aa5.75□□□□□ -1.49
CDC13YDL220C PBI2P0CT04 75 aaKnown RBP5.74□□□□□ -1.49
CDC13YDL220C YHR180WP38868 163 aa5.74□□□□□ -1.49
CDC13YDL220C YIA6P40556 373 aa5.74□□□□□ -1.49
CDC13YDL220C GGC1P38988 300 aa5.74□□□□□ -1.49
CDC13YDL220C YFL019CP43576 117 aa5.74□□□□□ -1.49
CDC13YDL220C RPS14AP06367 137 aaKnown RBP5.73□□□□□ -1.49
CDC13YDL220C RPL18AP0CX49 186 aaKnown RBP5.73□□□□□ -1.49
CDC13YDL220C RPL18BP0CX50 186 aaKnown RBP5.73□□□□□ -1.49
CDC13YDL220C YBR209WP38311 105 aa5.73□□□□□ -1.49
CDC13YDL220C VTC1P40046 129 aaRIP-Chip data5.73□□□□□ -1.49not detected
CDC13YDL220C YLR012CQ07927 99 aa5.73□□□□□ -1.49
CDC13YDL220C YOR192C-CQ3E736 78 aa5.73□□□□□ -1.49
CDC13YDL220C YGR164WP53291 111 aa5.73□□□□□ -1.49
CDC13YDL220C NRM1P53718 249 aa5.73□□□□□ -1.49
CDC13YDL220C NIP7Q08962 181 aaKnown RBP5.73□□□□□ -1.49
CDC13YDL220C FLO9P39712 1322 aa5.73□□□□□ -1.49
CDC13YDL220C SWD3P38123 315 aa5.72□□□□□ -1.49
CDC13YDL220C YER187WP40102 141 aa5.72□□□□□ -1.49
CDC13YDL220C YDR381C-AQ3E6R5 114 aa5.72□□□□□ -1.49
CDC13YDL220C RPL11BQ3E757 174 aaPredicted RBP5.72□□□□□ -1.49
CDC13YDL220C EAF6P47128 113 aa5.72□□□□□ -1.49
CDC13YDL220C ATP19P81451 68 aa5.72□□□□□ -1.49
CDC13YDL220C MIX14Q04341 121 aa5.72□□□□□ -1.49
CDC13YDL220C BLM10P43583 2143 aa5.71□□□□□ -1.49
CDC13YDL220C IRC23Q08416 157 aa5.71□□□□□ -1.5
CDC13YDL220C YOR268CQ08734 132 aa5.71□□□□□ -1.5
CDC13YDL220C RPL20AP0CX23 172 aaKnown RBP5.71□□□□□ -1.5
CDC13YDL220C RPL20BP0CX24 172 aaPredicted RBP5.71□□□□□ -1.5
CDC13YDL220C YKR032WP36127 104 aa5.71□□□□□ -1.5
CDC13YDL220C EMC6Q12431 108 aa5.71□□□□□ -1.5
CDC13YDL220C YPR053CQ6Q5F3 151 aa5.71□□□□□ -1.5
CDC13YDL220C UBC4P15731 148 aa5.7□□□□□ -1.5
CDC13YDL220C SGN1P40561 250 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
CDC13YDL220C YFR054CP43622 192 aa5.7□□□□□ -1.5
CDC13YDL220C YHP1Q04116 353 aa5.7□□□□□ -1.5
CDC13YDL220C YOR387CQ08910 206 aa5.7□□□□□ -1.5
CDC13YDL220C HAL1Q01766 294 aa5.7□□□□□ -1.5
CDC13YDL220C MIC10Q96VH5 97 aa5.7□□□□□ -1.5
CDC13YDL220C PAU7P39545 55 aa5.69□□□□□ -1.5
CDC13YDL220C YOL029CQ08187 201 aa5.69□□□□□ -1.5
CDC13YDL220C YHR173CP38864 112 aa5.69□□□□□ -1.5
CDC13YDL220C SIM1P40472 476 aa5.69□□□□□ -1.5
CDC13YDL220C PIR1Q03178 341 aa5.69□□□□□ -1.5
CDC13YDL220C YDR102CQ03864 110 aa5.68□□□□□ -1.5
CDC13YDL220C PBA1Q05778 276 aa5.68□□□□□ -1.5
CDC13YDL220C YOR376W-AQ3E805 51 aa5.68□□□□□ -1.5
CDC13YDL220C RPL16BP26785 198 aaKnown RBP5.68□□□□□ -1.5
CDC13YDL220C RPL32P38061 130 aaKnown RBP5.68□□□□□ -1.5
CDC13YDL220C ARF2P19146 181 aaKnown RBP5.67□□□□□ -1.5
CDC13YDL220C MXR2P25566 168 aa5.67□□□□□ -1.5
CDC13YDL220C PCL2P25693 308 aa5.67□□□□□ -1.5
CDC13YDL220C RPL11AP0C0W9 174 aaKnown RBP5.67□□□□□ -1.5
CDC13YDL220C RPS8AP0CX39 200 aaKnown RBP5.67□□□□□ -1.5
CDC13YDL220C RPS8BP0CX40 200 aaKnown RBP5.67□□□□□ -1.5
CDC13YDL220C VEL1P53058 206 aa5.67□□□□□ -1.5
CDC13YDL220C YGL034CP53186 121 aa5.67□□□□□ -1.5
CDC13YDL220C TIM22Q12328 207 aa5.67□□□□□ -1.5
CDC13YDL220C DIF1O13577 133 aa5.67□□□□□ -1.5
CDC13YDL220C YSY6P38374 65 aa5.67□□□□□ -1.5
CDC13YDL220C OST1P41543 476 aaKnown RBP5.67□□□□□ -1.5
CDC13YDL220C HNT2P49775 206 aa5.67□□□□□ -1.5
CDC13YDL220C YLR112WQ12130 139 aa5.67□□□□□ -1.5
CDC13YDL220C RPL28P02406 149 aaKnown RBP5.65□□□□□ -1.5
CDC13YDL220C AIM19P40502 157 aa5.65□□□□□ -1.5
CDC13YDL220C GAT4P40569 121 aa5.65□□□□□ -1.5
CDC13YDL220C NCA3P46955 337 aa5.65□□□□□ -1.5
CDC13YDL220C RPL15BP54780 204 aaPredicted RBP5.65□□□□□ -1.5
CDC13YDL220C YNL046WP53956 172 aa5.65□□□□□ -1.51
CDC13YDL220C SHH4Q06236 168 aa5.65□□□□□ -1.51
CDC13YDL220C TDA8Q6B2U8 126 aa5.65□□□□□ -1.51
CDC13YDL220C BEM2P39960 2167 aaKnown RBP5.64□□□□□ -1.51
CDC13YDL220C PFY1P07274 126 aa5.64□□□□□ -1.51
CDC13YDL220C HSP12P22943 109 aaKnown RBP5.64□□□□□ -1.51
CDC13YDL220C YNL217WP40152 326 aa5.64□□□□□ -1.51
CDC13YDL220C ATP23P53722 227 aa5.64□□□□□ -1.51
CDC13YDL220C HMRA2P0CY13 119 aa5.64□□□□□ -1.51
CDC13YDL220C RPL30P14120 105 aaKnown RBP5.64□□□□□ -1.51
CDC13YDL220C KEG1P43614 200 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms